; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G12950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G12950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationChr5:12334584..12336801
RNA-Seq ExpressionCSPI05G12950
SyntenyCSPI05G12950
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO72413.1 gag-pol polyprotein [Oryza sativa Japonica Group]7.2e-13247.99Show/hide
Query:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG
        MAM RSLLK M VP + WGEAVRHAV+LLN LP KA+G R PFEAW G KP L HLRVF C  + K T PHL+KLDDRS PV+Y GVEEG KAHRL+D  
Subjt:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG

Query:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVENVVP-----------------HATEIPAIGE--------------TSPSPPSMN
        R ++  SRDVVF EN  W W+       E+T  +FE   +   G E   P                  A + P + E              T PS P++ 
Subjt:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVENVVP-----------------HATEIPAIGE--------------TSPSPPSMN

Query:  T--------------------PIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGL
        +                    P+R RSL +I      V +  D+ + E ++V  EEPT Y+EA  +  W  AM  EL++IEKN TWSL  LP  HK IGL
Subjt:  T--------------------PIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGL

Query:  KWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIV
        KWVFKLKK+  GEV+KHKARLVAKGYVQRQG+DF+EVFA VARLDTV  IL +  +  W+VHHL+VKSAF NG+LEEEVYV+QPE F          ++ 
Subjt:  KWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIV

Query:  EGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGRIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKA
        +   GLRQAPRAWN RLDRS+KELGF +  QEQAVYTR  G   ++VGVYVDDLIVTG    E        KQ     +++ +F M D   + Y +    
Subjt:  EGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGRIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKA

Query:  QLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLENNLKFLSSCIVKCNCNLI
        +LHKD +G+ +D TEY+ ++ CLRYLL TRP LSY VG+ SR  F +  T    +   + L       NC L+
Subjt:  QLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLENNLKFLSSCIVKCNCNLI

ABB47537.2 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]1.7e-12849.81Show/hide
Query:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG
        MAM RSLLK M VP + WGEAVRHA++LLN LP KA+G R PFEAW G KP L HLRVF C  + K T PHL+KLDDRS P +Y GVEEG KAHRL+D  
Subjt:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG

Query:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVENVVPHATEIPAIGETS--PSPPSMNT---PIRLRSLTDIYANTEEV-IGGDEQE
        R ++  SRDVVF EN  W W+       E+T  +FE  E          P   E PA+ E +   SP +  +   P+R RSL +I      V +  D+ +
Subjt:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVENVVPHATEIPAIGETS--PSPPSMNT---PIRLRSLTDIYANTEEV-IGGDEQE

Query:  NEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDT
           ++   EEP  Y+EA  +  W  AM  EL++IEKN TWSL  LP  HK IGLKWVFKLKK+  GEV+KHKARLVA GYVQ+QG+DF+EVFA VARLDT
Subjt:  NEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDT

Query:  VLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVEGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGE-ECV
        V  ILA+ A+  W+VHHL+VKSAF NG+LEEEVYV+Q E F          E+ +   GLRQAPRAWN RLDRS+KELGF + ++  A   +  GE E  
Subjt:  VLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVEGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGE-ECV

Query:  LVGVYVDDLIVTGRIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSF
         +G+    L     IEV Q    I +KQ  Y ++IL+QFGM+DCN+    +E ++QLHK  EG+ +D TEY+ ++ CLRYLL T+P LSY VG+ S+  F
Subjt:  LVGVYVDDLIVTGRIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSF

Query:  PQHKTTADLENNLKFLSSCIVKCNCNLI
         +  T    +   + L       NC L+
Subjt:  PQHKTTADLENNLKFLSSCIVKCNCNLI

ABF94034.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]5.1e-14650.35Show/hide
Query:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG
        MAM RSLLK M VP +FWGEAVRHAV+LLN LP KA+G+R PFEAW G KP+L HL+VF C  + KNT PHL+KLDDRS P +Y GVEEG KAHRL+D  
Subjt:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG

Query:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQF-----ENLEDAETGVENVVPH----------------ATEIPA-----------IGETSPSPPSM
        RG++  SRDVVF+EN+ W W      G+E T+F       E L    T    V P+                A E+P+            G  +P  PS 
Subjt:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQF-----ENLEDAETGVENVVPH----------------ATEIPA-----------IGETSPSPPSM

Query:  NT------------------PIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLK
        N+                  P R RSL D+      V +  DE + E ++  SEEP+ Y+EA     W +AM+ E+++IEKN TW L  LP  H+ IGLK
Subjt:  NT------------------PIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLK

Query:  WVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVE
        WV+KLKK+  GE++KHKARLVAKGYVQ+QG+DFEEVFA VARLDTV V+LA+ A+  W+VHHL+VKSAF NGELEEEVYV QPE F          ++ +
Subjt:  WVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVE

Query:  GSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLK
           GLRQAPRAWNIRLDRSL+ELGF + TQEQAVYTR  G + ++VGVYVDDLIVTG                              IEV+Q +    LK
Subjt:  GSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLK

Query:  QPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSR
        Q  Y K++LSQFGM++CN++   ++P++QL KD EG P+DATEY+ I+  LRYLL TRP LSY VG+ SR
Subjt:  QPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSR

EEC84282.1 hypothetical protein OsI_30754 [Oryza sativa Indica Group]1.1e-14550.69Show/hide
Query:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG
        MAM RSL+K M VP +FWGEAVRHAVYLLN LP KA+G+R PFEAW G KP+L HLRVF C+ + K TTP+ +KLDDRS P +Y GVEEG KAHRL+D  
Subjt:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG

Query:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDA------------------------ETGVENVVPHATEIPAIGETSPS--PPSM------
         G++  SRDV+F+EN+ W W+ VV+  +  TEF  E  ED                         ++ + + V  +  +P   ++SPS  PPS       
Subjt:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDA------------------------ETGVENVVPHATEIPAIGETSPS--PPSM------

Query:  ---------------NTPIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVF
                         P+R RSL DI      V +  DE + + ++   EEP+ Y+EA     W  AM  EL++IEKN+TW+LT LP  HKPIGLKWV+
Subjt:  ---------------NTPIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVF

Query:  KLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVEGSL
        KLKK+  GEV+KHKARLVAKGYVQRQG+DFEEVFA VARLDTV VILA+ A+  WEVHHL+VKSAF NG+LEEEVYV QPE F           + +   
Subjt:  KLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVEGSL

Query:  GLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLKQPT
        GLRQAPRAWN RLD+ LKELGF + TQEQAVYTR +G+  V+VGVYVDDLIVTG                              IEV Q +  I +KQ  
Subjt:  GLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLKQPT

Query:  YPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLE
        Y K+ILSQFGM  CN     +EP++ LHKD +G PIDATEY+ ++ CLRYLL TRP LSY VG+ SR  F +  TT  L+
Subjt:  YPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLE

KAB8107251.1 hypothetical protein EE612_041900 [Oryza sativa]8.7e-14650.6Show/hide
Query:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG
        MAM RSL+K M VP +FWGEAVRHAVYLLN LP KA+G+R PFEAW G KP+L HLRVF C+ + K TTP+ +KLDDRS P +Y GVEEG KAHRL+D  
Subjt:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG

Query:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVE---------------------------NVVPHATEIPAIGETSPS--PPSM---
         G++  SRDV+F+EN+ W W+ VV+  +  TEF  E     E GV+                           + V  ++ +P   ++SPS  PPS    
Subjt:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVE---------------------------NVVPHATEIPAIGETSPS--PPSM---

Query:  ------------------NTPIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLK
                            P+R RSL DI      V +  DE + + ++   EEP+ Y+EA     W  AM  EL++IEKN+TW+LT LP  HKPIGLK
Subjt:  ------------------NTPIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLK

Query:  WVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVE
        WV+KLKK+  GEV+KHKARLVAKGYVQRQG+DFEEVFA VARLDTV VILA+ A+  WEVHHL+VKSAF NG+LEEEVYV QPE F           + +
Subjt:  WVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVE

Query:  GSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLK
           GLRQAPRAWN RLD+ LKELGF + TQEQAVYTR +G+  V+VGVYVDDLIVTG                              IEV Q +  I +K
Subjt:  GSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLK

Query:  QPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLE
        Q  Y K+ILSQFGM  CN     +EP++ LHKD +G PIDATEY+ ++ CLRYLL TRP LSY VG+ SR  F +  TT  L+
Subjt:  QPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLE

TrEMBL top hitse value%identityAlignment
A0A0P0XB91 Os08g0125300 protein4.2e-14650.6Show/hide
Query:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG
        MAM RSL+K M VP +FWGEAVRHAVYLLN LP KA+G+R PFEAW G KP+L HLRVF C+ + K TTP+ +KLDDRS P +Y GVEEG KAHRL+D  
Subjt:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG

Query:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVE---------------------------NVVPHATEIPAIGETSPS--PPSM---
         G++  SRDV+F+EN+ W W+ VV+  +  TEF  E     E GV+                           + V  ++ +P   ++SPS  PPS    
Subjt:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVE---------------------------NVVPHATEIPAIGETSPS--PPSM---

Query:  ------------------NTPIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLK
                            P+R RSL DI      V +  DE + + ++   EEP+ Y+EA     W  AM  EL++IEKN+TW+LT LP  HKPIGLK
Subjt:  ------------------NTPIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLK

Query:  WVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVE
        WV+KLKK+  GEV+KHKARLVAKGYVQRQG+DFEEVFA VARLDTV VILA+ A+  WEVHHL+VKSAF NG+LEEEVYV QPE F           + +
Subjt:  WVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVE

Query:  GSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLK
           GLRQAPRAWN RLD+ LKELGF + TQEQAVYTR +G+  V+VGVYVDDLIVTG                              IEV Q +  I +K
Subjt:  GSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLK

Query:  QPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLE
        Q  Y K+ILSQFGM  CN     +EP++ LHKD +G PIDATEY+ ++ CLRYLL TRP LSY VG+ SR  F +  TT  L+
Subjt:  QPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLE

B8BDZ6 Uncharacterized protein5.5e-14650.69Show/hide
Query:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG
        MAM RSL+K M VP +FWGEAVRHAVYLLN LP KA+G+R PFEAW G KP+L HLRVF C+ + K TTP+ +KLDDRS P +Y GVEEG KAHRL+D  
Subjt:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG

Query:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDA------------------------ETGVENVVPHATEIPAIGETSPS--PPSM------
         G++  SRDV+F+EN+ W W+ VV+  +  TEF  E  ED                         ++ + + V  +  +P   ++SPS  PPS       
Subjt:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDA------------------------ETGVENVVPHATEIPAIGETSPS--PPSM------

Query:  ---------------NTPIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVF
                         P+R RSL DI      V +  DE + + ++   EEP+ Y+EA     W  AM  EL++IEKN+TW+LT LP  HKPIGLKWV+
Subjt:  ---------------NTPIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVF

Query:  KLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVEGSL
        KLKK+  GEV+KHKARLVAKGYVQRQG+DFEEVFA VARLDTV VILA+ A+  WEVHHL+VKSAF NG+LEEEVYV QPE F           + +   
Subjt:  KLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVEGSL

Query:  GLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLKQPT
        GLRQAPRAWN RLD+ LKELGF + TQEQAVYTR +G+  V+VGVYVDDLIVTG                              IEV Q +  I +KQ  
Subjt:  GLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLKQPT

Query:  YPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLE
        Y K+ILSQFGM  CN     +EP++ LHKD +G PIDATEY+ ++ CLRYLL TRP LSY VG+ SR  F +  TT  L+
Subjt:  YPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLE

Q0J8A6 Os08g0125300 protein4.2e-14650.6Show/hide
Query:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG
        MAM RSL+K M VP +FWGEAVRHAVYLLN LP KA+G+R PFEAW G KP+L HLRVF C+ + K TTP+ +KLDDRS P +Y GVEEG KAHRL+D  
Subjt:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG

Query:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVE---------------------------NVVPHATEIPAIGETSPS--PPSM---
         G++  SRDV+F+EN+ W W+ VV+  +  TEF  E     E GV+                           + V  ++ +P   ++SPS  PPS    
Subjt:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVE---------------------------NVVPHATEIPAIGETSPS--PPSM---

Query:  ------------------NTPIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLK
                            P+R RSL DI      V +  DE + + ++   EEP+ Y+EA     W  AM  EL++IEKN+TW+LT LP  HKPIGLK
Subjt:  ------------------NTPIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLK

Query:  WVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVE
        WV+KLKK+  GEV+KHKARLVAKGYVQRQG+DFEEVFA VARLDTV VILA+ A+  WEVHHL+VKSAF NG+LEEEVYV QPE F           + +
Subjt:  WVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVE

Query:  GSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLK
           GLRQAPRAWN RLD+ LKELGF + TQEQAVYTR +G+  V+VGVYVDDLIVTG                              IEV Q +  I +K
Subjt:  GSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLK

Query:  QPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLE
        Q  Y K+ILSQFGM  CN     +EP++ LHKD +G PIDATEY+ ++ CLRYLL TRP LSY VG+ SR  F +  TT  L+
Subjt:  QPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLE

Q10F84 Gag-pol polyprotein3.5e-13247.99Show/hide
Query:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG
        MAM RSLLK M VP + WGEAVRHAV+LLN LP KA+G R PFEAW G KP L HLRVF C  + K T PHL+KLDDRS PV+Y GVEEG KAHRL+D  
Subjt:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG

Query:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVENVVP-----------------HATEIPAIGE--------------TSPSPPSMN
        R ++  SRDVVF EN  W W+       E+T  +FE   +   G E   P                  A + P + E              T PS P++ 
Subjt:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVENVVP-----------------HATEIPAIGE--------------TSPSPPSMN

Query:  T--------------------PIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGL
        +                    P+R RSL +I      V +  D+ + E ++V  EEPT Y+EA  +  W  AM  EL++IEKN TWSL  LP  HK IGL
Subjt:  T--------------------PIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGL

Query:  KWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIV
        KWVFKLKK+  GEV+KHKARLVAKGYVQRQG+DF+EVFA VARLDTV  IL +  +  W+VHHL+VKSAF NG+LEEEVYV+QPE F          ++ 
Subjt:  KWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIV

Query:  EGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGRIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKA
        +   GLRQAPRAWN RLDRS+KELGF +  QEQAVYTR  G   ++VGVYVDDLIVTG    E        KQ     +++ +F M D   + Y +    
Subjt:  EGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGRIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKA

Query:  QLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLENNLKFLSSCIVKCNCNLI
        +LHKD +G+ +D TEY+ ++ CLRYLL TRP LSY VG+ SR  F +  T    +   + L       NC L+
Subjt:  QLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLENNLKFLSSCIVKCNCNLI

Q10RM4 Retrotransposon protein, putative, unclassified2.5e-14650.35Show/hide
Query:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG
        MAM RSLLK M VP +FWGEAVRHAV+LLN LP KA+G+R PFEAW G KP+L HL+VF C  + KNT PHL+KLDDRS P +Y GVEEG KAHRL+D  
Subjt:  MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLG

Query:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQF-----ENLEDAETGVENVVPH----------------ATEIPA-----------IGETSPSPPSM
        RG++  SRDVVF+EN+ W W      G+E T+F       E L    T    V P+                A E+P+            G  +P  PS 
Subjt:  RGKLQNSRDVVFQENLEWAWNEVVSDGKEITEFQF-----ENLEDAETGVENVVPH----------------ATEIPA-----------IGETSPSPPSM

Query:  NT------------------PIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLK
        N+                  P R RSL D+      V +  DE + E ++  SEEP+ Y+EA     W +AM+ E+++IEKN TW L  LP  H+ IGLK
Subjt:  NT------------------PIRLRSLTDIYANTEEV-IGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLK

Query:  WVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVE
        WV+KLKK+  GE++KHKARLVAKGYVQ+QG+DFEEVFA VARLDTV V+LA+ A+  W+VHHL+VKSAF NGELEEEVYV QPE F          ++ +
Subjt:  WVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------EIVE

Query:  GSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLK
           GLRQAPRAWNIRLDRSL+ELGF + TQEQAVYTR  G + ++VGVYVDDLIVTG                              IEV+Q +    LK
Subjt:  GSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLK

Query:  QPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSR
        Q  Y K++LSQFGM++CN++   ++P++QL KD EG P+DATEY+ I+  LRYLL TRP LSY VG+ SR
Subjt:  QPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSR

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.9e-5126.81Show/hide
Query:  RSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKAL--GERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLGRG
        R+++    + + FWGEAV  A YL+N +P +AL    + P+E W   KP L HLRVF    YV +      K DD+S   I+ G E      +L+D    
Subjt:  RSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKAL--GERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLGRG

Query:  KLQNSRDVVFQE------------------NLEWAWNEVVSDGKEITEFQFEN----------LEDAETGVENVVPH------ATEIP------------
        K   +RDVV  E                  + E       +D ++I + +F N          L+D++       P+       TE P            
Subjt:  KLQNSRDVVFQE------------------NLEWAWNEVVSDGKEITEFQFEN----------LEDAETGVENVVPH------ATEIP------------

Query:  -------------------------AIGETSPSP-----------------PSMNTPIRLRSLTDIYANTEEVIGGDEQENEVMMVVSEEPTCYQEAVAD
                                 + G  +P+                  P+ N  I + +       T+  I  +E++N +  VV    T + +    
Subjt:  -------------------------AIGETSPSP-----------------PSMNTPIRLRSLTDIYANTEEVIGGDEQENEVMMVVSEEPTCYQEAVAD

Query:  ----------ARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVAN
                  + W +A+  EL + + NNTW++T+ P     +  +WVF +K +  G  +++KARLVA+G+ Q+  ID+EE FA VAR+ +   IL+LV  
Subjt:  ----------ARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVAN

Query:  HSWEVHHLNVKSAFFNGELEEEVYVTQPEDF--------EIVEGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREG--EECVLVGVYVDDLIV
        ++ +VH ++VK+AF NG L+EE+Y+  P+          ++ +   GL+QA R W    +++LKE  F   + ++ +Y   +G   E + V +YVDD+++
Subjt:  HSWEVHHLNVKSAFFNGELEEEVYVTQPEDF--------EIVEGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREG--EECVLVGVYVDDLIV

Query:  -TG----------------------------RIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDA-TEYKSIVDCLRYL
         TG                             I +E Q+ +I L Q  Y K+ILS+F M +CNA+   +  K  ++ ++  +  D  T  +S++ CL Y+
Subjt:  -TG----------------------------RIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDA-TEYKSIVDCLRYL

Query:  LI-TRPYLSYVVGMRSRVSFPQHKTTADLENNLK
        ++ TRP L+  V + SR S    K  ++L  NLK
Subjt:  LI-TRPYLSYVVGMRSRVSFPQHKTTADLENNLK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-6531.24Show/hide
Query:  RSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLGRGKL
        RS+L+   +P+ FWGEAV+ A YL+N  P   L   IP   W   +   +HL+VF C  +         KLDD+S+P I+ G  +    +RL+D  + K+
Subjt:  RSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLGRGKL

Query:  QNSRDVVFQE--------------------------------NLEWAWNEVVSDGKEITEFQFENLEDAETGVENVVPHATEIPAIGETSPSPPSMNTPI
          SRDVVF+E                                + E   +EV   G++  E   E  E  + GVE V     E P  GE    P   +   
Subjt:  QNSRDVVFQE--------------------------------NLEWAWNEVVSDGKEITEFQFENLEDAETGVENVVPHATEIPAIGETSPSPPSMNTPI

Query:  RLRSLTDIYANTEEVIGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAK
        R+ S    Y +TE V+  D++E E +  V   P   Q         +AM+ E++S++KN T+ L ELP   +P+  KWVFKLKKD + ++V++KARLV K
Subjt:  RLRSLTDIYANTEEVIGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAK

Query:  GYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDFEIV----------EGSLGLRQAPRAWNIRLDRSLKEL
        G+ Q++GIDF+E+F+ V ++ ++  IL+L A+   EV  L+VK+AF +G+LEEE+Y+ QPE FE+           +   GL+QAPR W ++ D  +K  
Subjt:  GYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDFEIV----------EGSLGLRQAPRAWNIRLDRSLKEL

Query:  GFRKYTQEQAVYTRREGE-ECVLVGVYVDDLIVTG-------------------------------RIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAI
         + K   +  VY +R  E   +++ +YVDD+++ G                               +I  E+   ++ L Q  Y +R+L +F M +   +
Subjt:  GFRKYTQEQAVYTRREGE-ECVLVGVYVDDLIVTG-------------------------------RIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAI

Query:  KYLVEPKAQLHKDM------EGAPIDATEYKSIVDCLRYLLI-TRPYLSYVVGMRSR
           +    +L K M      E   +    Y S V  L Y ++ TRP +++ VG+ SR
Subjt:  KYLVEPKAQLHKDM------EGAPIDATEYKSIVDCLRYLLI-TRPYLSYVVGMRSR

P92520 Uncharacterized mitochondrial protein AtMg008202.4e-1339.81Show/hide
Query:  VMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVL
        +   + +EP     A+ D  W QAM+ EL ++ +N TW L   P     +G KWVFK K   +G + + KARLVAKG+ Q +GI F E ++ V R  T+ 
Subjt:  VMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVL

Query:  VIL
         IL
Subjt:  VIL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.1e-4127.94Show/hide
Query:  PHATEIPAIGETSPSPPSM----------------NTPIRLRSLTDIYANTEEVIGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNT
        P  T   +   TSP+PPS+                  P+   S+    A    +    +    V +    EP    +A+ D RW  AM +E+ +   N+T
Subjt:  PHATEIPAIGETSPSPPSM----------------NTPIRLRSLTDIYANTEEVIGGDEQENEVMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNT

Query:  WSLTELPPEHKPI-GLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQP
        W L   PP H  I G +W+F  K + +G + ++KARLVAKGY QR G+D+ E F+ V +  ++ ++L +  + SW +  L+V +AF  G L ++VY++QP
Subjt:  WSLTELPPEHKPI-GLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQP

Query:  EDF----------EIVEGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-------------------------
          F          ++ +   GL+QAPRAW + L   L  +GF     + +++  + G+  V + VYVDD+++TG                          
Subjt:  EDF----------EIVEGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-------------------------

Query:  ----IEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSR-VSFPQHKTTADL
            IE ++    + L Q  Y   +L++  M+    +   + P  +L         D TEY+ IV  L+YL  TRP +SY V   S+ +  P  +    L
Subjt:  ----IEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSR-VSFPQHKTTADL

Query:  ENNLKFLS
        +  L++L+
Subjt:  ENNLKFLS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.5e-4129.77Show/hide
Query:  ATEIPAIGETSPSPPSMNTPIRLRSLTDIYANTEEVIGGDEQENE-----VMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPI
        +T  P +    P+PP +   +  ++  + ++       G  + N+       +  + EP    +A+ D RW QAM +E+ +   N+TW L   PP    I
Subjt:  ATEIPAIGETSPSPPSMNTPIRLRSLTDIYANTEEVIGGDEQENE-----VMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPI

Query:  -GLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------
         G +W+F  K + +G + ++KARLVAKGY QR G+D+ E F+ V +  ++ ++L +  + SW +  L+V +AF  G L +EVY++QP  F          
Subjt:  -GLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDF----------

Query:  EIVEGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGR
         + +   GL+QAPRAW + L   L  +GF     + +++  + G   + + VYVDD+++TG                              IE ++    
Subjt:  EIVEGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGR-----------------------------IEVEQQKGR

Query:  ILLKQPTYPKRILSQFGMVDCN--AIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLENNLK
        + L Q  Y   +L++  M+     A      PK  LH   +  P D TEY+ IV  L+YL  TRP LSY V   +R+S   H  T D  N LK
Subjt:  ILLKQPTYPKRILSQFGMVDCN--AIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLENNLK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.3e-4230.09Show/hide
Query:  VMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVL
        V +  ++EP+ Y EA     W  AM +E+ ++E  +TW +  LPP  KPIG KWV+K+K + +G + ++KARLVAKGY Q++GIDF E F+ V +L +V 
Subjt:  VMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVL

Query:  VILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDFEIVEGS--------------LGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEEC
        +ILA+ A +++ +H L++ +AF NG+L+EE+Y+  P  +   +G                GL+QA R W ++   +L   GF +   +   + +      
Subjt:  VILALVANHSWEVHHLNVKSAFFNGELEEEVYVTQPEDFEIVEGS--------------LGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEEC

Query:  VLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATE
        + V VYVDD+I+                                +E+ +    I + Q  Y   +L + G++ C      ++P         G  +DA  
Subjt:  VLVGVYVDDLIVTGR-----------------------------IEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATE

Query:  YKSIVDCLRYLLITRPYLSYVVGMRSRVS
        Y+ ++  L YL ITR  +S+ V   S+ S
Subjt:  YKSIVDCLRYLLITRPYLSYVVGMRSRVS

ATMG00810.1 DNA/RNA polymerases superfamily protein1.1e-0531.25Show/hide
Query:  IEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGM
        I+++     + L Q  Y ++IL+  GM+DC  +   +  K          P D ++++SIV  L+YL +TRP +SY V +
Subjt:  IEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQLHKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGM

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.7e-1439.81Show/hide
Query:  VMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVL
        +   + +EP     A+ D  W QAM+ EL ++ +N TW L   P     +G KWVFK K   +G + + KARLVAKG+ Q +GI F E ++ V R  T+ 
Subjt:  VMMVVSEEPTCYQEAVADARWYQAMKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVL

Query:  VIL
         IL
Subjt:  VIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGACGAGATCACTCCTCAAAAGCATGCACGTGCCTGAAAAATTTTGGGGAGAGGCAGTGAGACACGCAGTTTATTTGTTAAATTGTCTTCCAATGAAGGCCCT
TGGAGAACGCATACCATTTGAAGCTTGGATGGGGATGAAGCCACGTCTTACACACTTGAGAGTCTTTATTTGTGTGACATATGTAAAGAACACAACCCCTCACCTCCAGA
AACTCGACGATCGAAGCTTACCGGTGATATATTTTGGTGTCGAAGAAGGATGCAAAGCTCATCGCTTATATGACCTTGGTCGTGGAAAACTACAAAATAGTAGAGATGTT
GTTTTTCAAGAGAATCTTGAATGGGCTTGGAACGAAGTCGTTAGTGACGGTAAGGAGATTACGGAGTTTCAGTTCGAAAACTTGGAGGATGCAGAAACTGGGGTTGAAAA
TGTCGTACCACATGCAACTGAGATACCTGCGATTGGAGAAACCAGTCCATCTCCTCCATCGATGAACACACCGATCCGTCTAAGATCTCTCACTGACATCTATGCCAACA
CAGAAGAAGTTATAGGTGGTGATGAACAAGAGAATGAGGTGATGATGGTAGTGTCCGAAGAACCGACTTGTTACCAAGAAGCTGTTGCAGATGCCCGTTGGTATCAAGCA
ATGAAGAATGAATTAAAATCCATTGAGAAAAACAACACATGGAGTCTGACTGAGCTTCCACCAGAACACAAACCCATTGGTCTAAAATGGGTGTTCAAATTAAAGAAAGA
CCCTAATGGAGAAGTTGTCAAGCACAAAGCAAGATTGGTTGCTAAAGGCTATGTACAAAGACAAGGCATTGACTTTGAAGAAGTTTTTGCACTGGTTGCAAGACTTGACA
CCGTTCTAGTCATTCTTGCACTCGTTGCAAACCATAGTTGGGAGGTACACCATCTAAATGTGAAGTCAGCATTTTTCAATGGAGAATTGGAAGAAGAAGTATATGTTACT
CAACCGGAGGATTTTGAGATTGTCGAAGGCTCTCTAGGATTGAGGCAAGCTCCACGAGCTTGGAACATTCGACTTGATAGGAGTCTCAAAGAGCTTGGTTTTAGAAAATA
CACTCAAGAGCAAGCAGTCTACACAAGAAGAGAAGGAGAAGAATGCGTTCTTGTTGGAGTGTATGTTGACGATCTCATTGTAACAGGAAGAATTGAAGTTGAACAACAGA
AGGGTCGAATCCTGCTCAAACAACCAACTTATCCTAAAAGAATTTTGTCCCAATTTGGAATGGTTGATTGCAATGCCATAAAGTATCTAGTGGAACCCAAGGCACAACTT
CACAAAGACATGGAAGGAGCACCAATTGATGCTACGGAGTACAAAAGCATCGTTGATTGTCTTAGATACTTACTGATCACAAGGCCATATCTTTCATATGTTGTTGGGAT
GAGGAGTAGGGTTTCGTTTCCTCAACACAAAACAACTGCTGATCTGGAAAACAATCTTAAATTTCTTTCTTCTTGCATTGTAAAGTGTAATTGTAATCTGATTGTAACCA
GAATAGTCATCCAGAAAGTAGTAGAATTTCTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGACGAGATCACTCCTCAAAAGCATGCACGTGCCTGAAAAATTTTGGGGAGAGGCAGTGAGACACGCAGTTTATTTGTTAAATTGTCTTCCAATGAAGGCCCT
TGGAGAACGCATACCATTTGAAGCTTGGATGGGGATGAAGCCACGTCTTACACACTTGAGAGTCTTTATTTGTGTGACATATGTAAAGAACACAACCCCTCACCTCCAGA
AACTCGACGATCGAAGCTTACCGGTGATATATTTTGGTGTCGAAGAAGGATGCAAAGCTCATCGCTTATATGACCTTGGTCGTGGAAAACTACAAAATAGTAGAGATGTT
GTTTTTCAAGAGAATCTTGAATGGGCTTGGAACGAAGTCGTTAGTGACGGTAAGGAGATTACGGAGTTTCAGTTCGAAAACTTGGAGGATGCAGAAACTGGGGTTGAAAA
TGTCGTACCACATGCAACTGAGATACCTGCGATTGGAGAAACCAGTCCATCTCCTCCATCGATGAACACACCGATCCGTCTAAGATCTCTCACTGACATCTATGCCAACA
CAGAAGAAGTTATAGGTGGTGATGAACAAGAGAATGAGGTGATGATGGTAGTGTCCGAAGAACCGACTTGTTACCAAGAAGCTGTTGCAGATGCCCGTTGGTATCAAGCA
ATGAAGAATGAATTAAAATCCATTGAGAAAAACAACACATGGAGTCTGACTGAGCTTCCACCAGAACACAAACCCATTGGTCTAAAATGGGTGTTCAAATTAAAGAAAGA
CCCTAATGGAGAAGTTGTCAAGCACAAAGCAAGATTGGTTGCTAAAGGCTATGTACAAAGACAAGGCATTGACTTTGAAGAAGTTTTTGCACTGGTTGCAAGACTTGACA
CCGTTCTAGTCATTCTTGCACTCGTTGCAAACCATAGTTGGGAGGTACACCATCTAAATGTGAAGTCAGCATTTTTCAATGGAGAATTGGAAGAAGAAGTATATGTTACT
CAACCGGAGGATTTTGAGATTGTCGAAGGCTCTCTAGGATTGAGGCAAGCTCCACGAGCTTGGAACATTCGACTTGATAGGAGTCTCAAAGAGCTTGGTTTTAGAAAATA
CACTCAAGAGCAAGCAGTCTACACAAGAAGAGAAGGAGAAGAATGCGTTCTTGTTGGAGTGTATGTTGACGATCTCATTGTAACAGGAAGAATTGAAGTTGAACAACAGA
AGGGTCGAATCCTGCTCAAACAACCAACTTATCCTAAAAGAATTTTGTCCCAATTTGGAATGGTTGATTGCAATGCCATAAAGTATCTAGTGGAACCCAAGGCACAACTT
CACAAAGACATGGAAGGAGCACCAATTGATGCTACGGAGTACAAAAGCATCGTTGATTGTCTTAGATACTTACTGATCACAAGGCCATATCTTTCATATGTTGTTGGGAT
GAGGAGTAGGGTTTCGTTTCCTCAACACAAAACAACTGCTGATCTGGAAAACAATCTTAAATTTCTTTCTTCTTGCATTGTAAAGTGTAATTGTAATCTGATTGTAACCA
GAATAGTCATCCAGAAAGTAGTAGAATTTCTTCCTTAA
Protein sequenceShow/hide protein sequence
MAMTRSLLKSMHVPEKFWGEAVRHAVYLLNCLPMKALGERIPFEAWMGMKPRLTHLRVFICVTYVKNTTPHLQKLDDRSLPVIYFGVEEGCKAHRLYDLGRGKLQNSRDV
VFQENLEWAWNEVVSDGKEITEFQFENLEDAETGVENVVPHATEIPAIGETSPSPPSMNTPIRLRSLTDIYANTEEVIGGDEQENEVMMVVSEEPTCYQEAVADARWYQA
MKNELKSIEKNNTWSLTELPPEHKPIGLKWVFKLKKDPNGEVVKHKARLVAKGYVQRQGIDFEEVFALVARLDTVLVILALVANHSWEVHHLNVKSAFFNGELEEEVYVT
QPEDFEIVEGSLGLRQAPRAWNIRLDRSLKELGFRKYTQEQAVYTRREGEECVLVGVYVDDLIVTGRIEVEQQKGRILLKQPTYPKRILSQFGMVDCNAIKYLVEPKAQL
HKDMEGAPIDATEYKSIVDCLRYLLITRPYLSYVVGMRSRVSFPQHKTTADLENNLKFLSSCIVKCNCNLIVTRIVIQKVVEFLP