; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G13200 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G13200
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrotransposon protein
Genome locationChr5:12764515..12766616
RNA-Seq ExpressionCSPI05G13200
SyntenyCSPI05G13200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33754.1 retrotransposon protein [Cucumis melo subsp. melo]1.0e-8144.22Show/hide
Query:  IEGVLQHETLVQCRTIMACCLLHNLINREMTNVDTLDDDDDKGDSNYA-TTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTR
        + G   +   VQCRTI+AC LLHNLINREMT  + ++D+D+ GDS YA TT  +DI YIE +NEW+QWRDDL  SMF +WQ R                 
Subjt:  IEGVLQHETLVQCRTIMACCLLHNLINREMTNVDTLDDDDDKGDSNYA-TTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTR

Query:  VEESCLVSCLVNLVSAEGWRSDNGTFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRA
               SC + LVS  GW+SDNGTFRPGYLAQL+RM+A+++ GC++ +TTV++ R+                  +GFGWND+ +CIVAE+++FD+WVR+
Subjt:  VEESCLVSCLVNLVSAEGWRSDNGTFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRA

Query:  HPAAKGLLNKPFSYYDDLSYVFEKDRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQ
         PAAKGLLN PF YYD+L+YVF +DRATG  AE F D+ SN P          D + +FP + S  +++  DD+ + RPSR+S+ +  SSGSKRKR  Q+
Subjt:  HPAAKGLLNKPFSYYDDLSYVFEKDRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQ

Query:  IDSLDVIRDAMDCTNAQLRAIAEWPDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRN
           ++ I  A+D TN QLR IAEWP + L ++  V  E    L+ +P+L+  D       ++ +   +  F+ MP+  +  +CRV+LR+
Subjt:  IDSLDVIRDAMDCTNAQLRAIAEWPDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRN

ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]2.6e-10141.87Show/hide
Query:  MAVLRLSDELLAKPQLVPSDCTD----------------------PKCDRPRYRTQKG-----------------------EGDKCSWRMLQKGTSFSSY
        +AV+RL +ELL KPQ VP++CTD                      P  DR RYRT+KG                       EG     R+L+   S    
Subjt:  MAVLRLSDELLAKPQLVPSDCTD----------------------PKCDRPRYRTQKG-----------------------EGDKCSWRMLQKGTSFSSY

Query:  QAGKVQQLTLISYTVPFPDPTDKGIL------------------RRTTIPPIRVAWHWKCSNYIE---GVLQ-----------HETLVQCRTIMACCLLH
        +  +++      Y V    P  +G L                    +T        H+   N IE   GVL+           +   VQCRTI+ACCLLH
Subjt:  QAGKVQQLTLISYTVPFPDPTDKGIL------------------RRTTIPPIRVAWHWKCSNYIE---GVLQ-----------HETLVQCRTIMACCLLH

Query:  NLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNG
        NLINREMTN D ++D+ D+ DS +ATT  DDI+YIE SNEW+QWRD+L + +          M SSSR PKH WT+ EE+ LV CLV LV+A GWRSDNG
Subjt:  NLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNG

Query:  TFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEK
        TFRPGYL QL RM+A ++PG  + ++T ++SR+                  +GFGWND+ +CIVAE+++FD W  +HPAAKGLLNK F +YD+LSYVF K
Subjt:  TFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEK

Query:  DRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEW
        DRATG RAE F DI SN+P   D        D +FP M S  +NMSPDD+M  R +R S+ R  SSGSKRKR     DS D++R A++  N QL  IAEW
Subjt:  DRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEW

Query:  PDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRNN
        P    Q      +E++ HL++IP+L+  D  + + ++M     M  FLE+PDH+K  YC +IL+ N
Subjt:  PDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRNN

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]5.2e-8137.99Show/hide
Query:  MAVLRLSDELLAKPQLVPSDCTD----------------------PKCDRPRYRTQKG-----------------------EGDKCSWRMLQKGTSFSSY
        +AV+RL DELL KPQ VP++CTD                      P  DR RYRT+KG                       EG     R+L+   S    
Subjt:  MAVLRLSDELLAKPQLVPSDCTD----------------------PKCDRPRYRTQKG-----------------------EGDKCSWRMLQKGTSFSSY

Query:  QAGKVQQLTLISYTVPFPDPTDKGIL------------------RRTTIPPIRVAWHWKCSNYIE---GVLQ-----------HETLVQCRTIMACCLLH
        +  +++      Y V    P  +G L                    +T        H    N IE   GVL+           H   VQC TI+ACCLLH
Subjt:  QAGKVQQLTLISYTVPFPDPTDKGIL------------------RRTTIPPIRVAWHWKCSNYIE---GVLQ-----------HETLVQCRTIMACCLLH

Query:  NLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNG
        NLINREMTN D  D                  N +                           M SSSR PKH WT+ EE    + LV LV+A GWRSDNG
Subjt:  NLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNG

Query:  TFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEK
        TFRPGYL QL RM+A ++PGC + ++T ++SR+                  +GFGWND+ +CIVAE+++FD W  +HPAAKGLLNK F +YD+LSYVF K
Subjt:  TFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEK

Query:  DRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEW
        DRATG RAE F DI SNNP   D        D +F  M SL +NMSPDD+M  R +R S+ R  SSGSKRKR     DS D++R A++  N QL  IAEW
Subjt:  DRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEW

Query:  PDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRNN
        P    Q      +E++  L++IP+L+  D  + + ++M     M  FLE+PD++K  YC +IL+ N
Subjt:  PDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRNN

KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-8054.34Show/hide
Query:  VQCRTIMACCLLHNLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLV
        VQCRTI+ACCLLHNLINREM   D +DD D+  DS +AT+  DDI+YIE SNEWT+WRDDL + MF+EW+ RN  MASS R  KH WT+ EE+ LV CLV
Subjt:  VQCRTIMACCLLHNLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLV

Query:  NLVSAEGWRSDNGTFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRMNGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATG
         LV+A GWRSDNGTFRPG +  L RM       C  T +         FGWND+ +CIVAE+++FD+WV++HP AKGLLNK F +YD+LSYVF KDRATG
Subjt:  NLVSAEGWRSDNGTFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRMNGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATG

Query:  ARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTL
         RAE F DI  N+P   +        D +F  M S  +NMSPD++M  R ++ S+ R  SSGSKRKR  Q  DS DV+R A++  N QL  IAEWP    
Subjt:  ARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTL

Query:  QSEAFVWREVL
        Q  +   +EV+
Subjt:  QSEAFVWREVL

KAA0036924.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-8446.94Show/hide
Query:  MTNVDTLDDDDDKGDSNYA-TTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNGTFRPG
        MT  D ++D+D+ GDS YA TT  +DI YIE +NEW+QWRD+L  SMF +W     +M++S+R P+H WTR EE  LV CL+ LVS  GW+SDNGTFRPG
Subjt:  MTNVDTLDDDDDKGDSNYA-TTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNGTFRPG

Query:  YLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATG
        YLAQL+RM+A+++PGC++ +TTV++ R+                  +GFGWND+ +CIVAE+++FD+WVR+HPAAKGLLNKPF YYD+L+YVF +DRATG
Subjt:  YLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATG

Query:  ARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTL
          AE F D+ SN P          D + +FP + S  +++S DD+ + RPSR+S+ R  SSGSKRKR  Q+   L+ I  A+D TN QLR IAEWP + L
Subjt:  ARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTL

Query:  QSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRN
         ++  +  E    L+ +P+L+  D       ++ +   +  F+ MP+  +  +CRV+LR+
Subjt:  QSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRN

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein2.5e-8137.99Show/hide
Query:  MAVLRLSDELLAKPQLVPSDCTD----------------------PKCDRPRYRTQKG-----------------------EGDKCSWRMLQKGTSFSSY
        +AV+RL DELL KPQ VP++CTD                      P  DR RYRT+KG                       EG     R+L+   S    
Subjt:  MAVLRLSDELLAKPQLVPSDCTD----------------------PKCDRPRYRTQKG-----------------------EGDKCSWRMLQKGTSFSSY

Query:  QAGKVQQLTLISYTVPFPDPTDKGIL------------------RRTTIPPIRVAWHWKCSNYIE---GVLQ-----------HETLVQCRTIMACCLLH
        +  +++      Y V    P  +G L                    +T        H    N IE   GVL+           H   VQC TI+ACCLLH
Subjt:  QAGKVQQLTLISYTVPFPDPTDKGIL------------------RRTTIPPIRVAWHWKCSNYIE---GVLQ-----------HETLVQCRTIMACCLLH

Query:  NLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNG
        NLINREMTN D  D                  N +                           M SSSR PKH WT+ EE    + LV LV+A GWRSDNG
Subjt:  NLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNG

Query:  TFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEK
        TFRPGYL QL RM+A ++PGC + ++T ++SR+                  +GFGWND+ +CIVAE+++FD W  +HPAAKGLLNK F +YD+LSYVF K
Subjt:  TFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEK

Query:  DRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEW
        DRATG RAE F DI SNNP   D        D +F  M SL +NMSPDD+M  R +R S+ R  SSGSKRKR     DS D++R A++  N QL  IAEW
Subjt:  DRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEW

Query:  PDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRNN
        P    Q      +E++  L++IP+L+  D  + + ++M     M  FLE+PD++K  YC +IL+ N
Subjt:  PDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRNN

A0A5A7SXX8 Retrotransposon protein5.6e-8154.34Show/hide
Query:  VQCRTIMACCLLHNLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLV
        VQCRTI+ACCLLHNLINREM   D +DD D+  DS +AT+  DDI+YIE SNEWT+WRDDL + MF+EW+ RN  MASS R  KH WT+ EE+ LV CLV
Subjt:  VQCRTIMACCLLHNLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLV

Query:  NLVSAEGWRSDNGTFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRMNGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATG
         LV+A GWRSDNGTFRPG +  L RM       C  T +         FGWND+ +CIVAE+++FD+WV++HP AKGLLNK F +YD+LSYVF KDRATG
Subjt:  NLVSAEGWRSDNGTFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRMNGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATG

Query:  ARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTL
         RAE F DI  N+P   +        D +F  M S  +NMSPD++M  R ++ S+ R  SSGSKRKR  Q  DS DV+R A++  N QL  IAEWP    
Subjt:  ARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTL

Query:  QSEAFVWREVL
        Q  +   +EV+
Subjt:  QSEAFVWREVL

A0A5A7T091 Retrotransposon protein1.4e-8446.94Show/hide
Query:  MTNVDTLDDDDDKGDSNYA-TTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNGTFRPG
        MT  D ++D+D+ GDS YA TT  +DI YIE +NEW+QWRD+L  SMF +W     +M++S+R P+H WTR EE  LV CL+ LVS  GW+SDNGTFRPG
Subjt:  MTNVDTLDDDDDKGDSNYA-TTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNGTFRPG

Query:  YLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATG
        YLAQL+RM+A+++PGC++ +TTV++ R+                  +GFGWND+ +CIVAE+++FD+WVR+HPAAKGLLNKPF YYD+L+YVF +DRATG
Subjt:  YLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATG

Query:  ARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTL
          AE F D+ SN P          D + +FP + S  +++S DD+ + RPSR+S+ R  SSGSKRKR  Q+   L+ I  A+D TN QLR IAEWP + L
Subjt:  ARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTL

Query:  QSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRN
         ++  +  E    L+ +P+L+  D       ++ +   +  F+ MP+  +  +CRV+LR+
Subjt:  QSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRN

E5GBB2 Retrotransposon protein5.0e-8244.22Show/hide
Query:  IEGVLQHETLVQCRTIMACCLLHNLINREMTNVDTLDDDDDKGDSNYA-TTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTR
        + G   +   VQCRTI+AC LLHNLINREMT  + ++D+D+ GDS YA TT  +DI YIE +NEW+QWRDDL  SMF +WQ R                 
Subjt:  IEGVLQHETLVQCRTIMACCLLHNLINREMTNVDTLDDDDDKGDSNYA-TTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTR

Query:  VEESCLVSCLVNLVSAEGWRSDNGTFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRA
               SC + LVS  GW+SDNGTFRPGYLAQL+RM+A+++ GC++ +TTV++ R+                  +GFGWND+ +CIVAE+++FD+WVR+
Subjt:  VEESCLVSCLVNLVSAEGWRSDNGTFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRA

Query:  HPAAKGLLNKPFSYYDDLSYVFEKDRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQ
         PAAKGLLN PF YYD+L+YVF +DRATG  AE F D+ SN P          D + +FP + S  +++  DD+ + RPSR+S+ +  SSGSKRKR  Q+
Subjt:  HPAAKGLLNKPFSYYDDLSYVFEKDRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQ

Query:  IDSLDVIRDAMDCTNAQLRAIAEWPDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRN
           ++ I  A+D TN QLR IAEWP + L ++  V  E    L+ +P+L+  D       ++ +   +  F+ MP+  +  +CRV+LR+
Subjt:  IDSLDVIRDAMDCTNAQLRAIAEWPDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRN

E5GCB5 Retrotransposon protein1.3e-10141.87Show/hide
Query:  MAVLRLSDELLAKPQLVPSDCTD----------------------PKCDRPRYRTQKG-----------------------EGDKCSWRMLQKGTSFSSY
        +AV+RL +ELL KPQ VP++CTD                      P  DR RYRT+KG                       EG     R+L+   S    
Subjt:  MAVLRLSDELLAKPQLVPSDCTD----------------------PKCDRPRYRTQKG-----------------------EGDKCSWRMLQKGTSFSSY

Query:  QAGKVQQLTLISYTVPFPDPTDKGIL------------------RRTTIPPIRVAWHWKCSNYIE---GVLQ-----------HETLVQCRTIMACCLLH
        +  +++      Y V    P  +G L                    +T        H+   N IE   GVL+           +   VQCRTI+ACCLLH
Subjt:  QAGKVQQLTLISYTVPFPDPTDKGIL------------------RRTTIPPIRVAWHWKCSNYIE---GVLQ-----------HETLVQCRTIMACCLLH

Query:  NLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNG
        NLINREMTN D ++D+ D+ DS +ATT  DDI+YIE SNEW+QWRD+L + +          M SSSR PKH WT+ EE+ LV CLV LV+A GWRSDNG
Subjt:  NLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRSDNG

Query:  TFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEK
        TFRPGYL QL RM+A ++PG  + ++T ++SR+                  +GFGWND+ +CIVAE+++FD W  +HPAAKGLLNK F +YD+LSYVF K
Subjt:  TFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRM------------------NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEK

Query:  DRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEW
        DRATG RAE F DI SN+P   D        D +FP M S  +NMSPDD+M  R +R S+ R  SSGSKRKR     DS D++R A++  N QL  IAEW
Subjt:  DRATGARAEMFTDIESNNPVANDRVRPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEW

Query:  PDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRNN
        P    Q      +E++ HL++IP+L+  D  + + ++M     M  FLE+PDH+K  YC +IL+ N
Subjt:  PDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIMVVMEKTSLMHTFLEMPDHLKRAYCRVILRNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.2 unknown protein4.9e-0531.48Show/hide
Query:  NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATG
        NGF W+     ++A+ DI++++++AHP A+    K    Y +L ++F K+ + G
Subjt:  NGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATG

AT4G02210.1 unknown protein1.4e-0431.11Show/hide
Query:  RMNGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDL
        R +GF W+++ Q + A+ +++  +++AH  A+  + +P  YY DL
Subjt:  RMNGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDL

AT4G02210.2 unknown protein1.4e-0431.11Show/hide
Query:  RMNGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDL
        R +GF W+++ Q + A+ +++  +++AH  A+  + +P  YY DL
Subjt:  RMNGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDL

AT5G27260.1 unknown protein1.3e-0523.64Show/hide
Query:  WTRVEESCLVSCLVNLVSAEGWRSDNGT---------FRPGYLAQLLRM-----LAKRMPGCKLTSTTVVESR--MNGFGWNDDLQCIVAERDIFDSWVR
        W+  E   LV  LV  ++   WR  NGT         F P    +  R         RM   K+   + ++ +   +GFGW+   +   A  +++  +++
Subjt:  WTRVEESCLVSCLVNLVSAEGWRSDNGT---------FRPGYLAQLLRM-----LAKRMPGCKLTSTTVVESR--MNGFGWNDDLQCIVAERDIFDSWVR

Query:  AHPAAKGLLNKPFSYYDDLSYVFEKDRATGARAEMF---TDIESNNPVANDRVRPKDDLD--MEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKR
        AHP  K L    F ++D+L  +F +  ATG  A      TD  +     N R    DD D   E+ + +    +      MS   S S  + P      R
Subjt:  AHPAAKGLLNKPFSYYDDLSYVFEKDRATGARAEMF---TDIESNNPVANDRVRPKDDLD--MEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKR

Query:  KRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTLQSE-AFVWREVLAHLQSIPDLSE
        KR   +  +       M   ++++  I +  ++  Q+E A     V   ++ I DL E
Subjt:  KRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTLQSE-AFVWREVLAHLQSIPDLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTACTGCGTCTGTCGGATGAGTTATTGGCGAAACCACAGCTTGTTCCAAGCGACTGCACAGATCCCAAGTGTGATCGACCTAGATATCGAACACAGAAGGGTGA
AGGCGACAAATGTTCTTGGCGTATGCTACAAAAGGGGACTTCATTTTCATCTTATCAGGCTGGAAAGGTTCAGCAGCTGACTCTCATATCCTACACGGTGCCATTTCCAG
ACCCAACGGACAAAGGGATCCTAAGGAGGACAACGATACCACCTATAAGAGTGGCGTGGCACTGGAAATGCTCCAACTACATCGAAGGAGTTCTTCAACATGAAACACTA
GTTCAGTGTCGCACTATTATGGCTTGTTGTCTACTCCATAATCTAATAAATCGTGAGATGACAAATGTCGACACACTAGACGACGACGATGACAAGGGTGACTCAAACTA
TGCAACGACTGTAGGTGACGACATCAACTACATTGAGGCGTCAAACGAATGGACTCAATGGAGGGATGACCTCACACAATCGATGTTCAACGAATGGCAGTCGCGAAACT
CCTACATGGCTAGTTCATCGAGAAACCCAAAGCACGCGTGGACGAGGGTAGAGGAGTCATGTCTCGTTAGTTGTCTTGTCAATCTTGTCTCCGCAGAAGGGTGGAGATCA
GACAACGGCACCTTTCGACCTGGCTACCTTGCGCAGTTACTGAGAATGCTAGCTAAGAGGATGCCAGGGTGCAAATTGACATCCACTACCGTTGTAGAAAGCAGAATGAA
TGGGTTCGGGTGGAATGATGACCTTCAGTGCATCGTTGCGGAGCGGGACATTTTCGACAGCTGGGTCCGGGCACATCCTGCAGCGAAAGGCCTACTAAACAAACCTTTTT
CGTATTACGATGATTTATCATACGTATTCGAAAAAGATCGTGCGACAGGGGCACGTGCGGAAATGTTCACGGATATCGAGTCTAACAACCCCGTAGCTAATGACAGAGTA
CGACCGAAGGATGACCTTGATATGGAGTTCCCTAGTATGTCGAGCCTGAGGATGAACATGTCTCCAGATGACATGATGAGCAGGCGTCCTTCGAGGTCGAGTGATGTTAG
ACCTAGCTCGAGCGGAAGTAAGAGGAAGCGGATCATGCAGCAGATCGATAGCTTGGACGTAATTCGCGATGCCATGGATTGTACGAATGCACAACTGCGAGCGATTGCAG
AATGGCCGGATAAGACCCTACAGAGTGAAGCATTTGTGTGGCGGGAAGTACTGGCACACCTGCAATCCATTCCAGACCTCAGTGAAGAGGACCTAATGAAATGTATAATG
GTCGTGATGGAAAAAACATCGTTAATGCATACATTTTTGGAGATGCCCGATCACCTGAAGCGTGCCTACTGTAGGGTCATTCTACGCAATAACCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTACTGCGTCTGTCGGATGAGTTATTGGCGAAACCACAGCTTGTTCCAAGCGACTGCACAGATCCCAAGTGTGATCGACCTAGATATCGAACACAGAAGGGTGA
AGGCGACAAATGTTCTTGGCGTATGCTACAAAAGGGGACTTCATTTTCATCTTATCAGGCTGGAAAGGTTCAGCAGCTGACTCTCATATCCTACACGGTGCCATTTCCAG
ACCCAACGGACAAAGGGATCCTAAGGAGGACAACGATACCACCTATAAGAGTGGCGTGGCACTGGAAATGCTCCAACTACATCGAAGGAGTTCTTCAACATGAAACACTA
GTTCAGTGTCGCACTATTATGGCTTGTTGTCTACTCCATAATCTAATAAATCGTGAGATGACAAATGTCGACACACTAGACGACGACGATGACAAGGGTGACTCAAACTA
TGCAACGACTGTAGGTGACGACATCAACTACATTGAGGCGTCAAACGAATGGACTCAATGGAGGGATGACCTCACACAATCGATGTTCAACGAATGGCAGTCGCGAAACT
CCTACATGGCTAGTTCATCGAGAAACCCAAAGCACGCGTGGACGAGGGTAGAGGAGTCATGTCTCGTTAGTTGTCTTGTCAATCTTGTCTCCGCAGAAGGGTGGAGATCA
GACAACGGCACCTTTCGACCTGGCTACCTTGCGCAGTTACTGAGAATGCTAGCTAAGAGGATGCCAGGGTGCAAATTGACATCCACTACCGTTGTAGAAAGCAGAATGAA
TGGGTTCGGGTGGAATGATGACCTTCAGTGCATCGTTGCGGAGCGGGACATTTTCGACAGCTGGGTCCGGGCACATCCTGCAGCGAAAGGCCTACTAAACAAACCTTTTT
CGTATTACGATGATTTATCATACGTATTCGAAAAAGATCGTGCGACAGGGGCACGTGCGGAAATGTTCACGGATATCGAGTCTAACAACCCCGTAGCTAATGACAGAGTA
CGACCGAAGGATGACCTTGATATGGAGTTCCCTAGTATGTCGAGCCTGAGGATGAACATGTCTCCAGATGACATGATGAGCAGGCGTCCTTCGAGGTCGAGTGATGTTAG
ACCTAGCTCGAGCGGAAGTAAGAGGAAGCGGATCATGCAGCAGATCGATAGCTTGGACGTAATTCGCGATGCCATGGATTGTACGAATGCACAACTGCGAGCGATTGCAG
AATGGCCGGATAAGACCCTACAGAGTGAAGCATTTGTGTGGCGGGAAGTACTGGCACACCTGCAATCCATTCCAGACCTCAGTGAAGAGGACCTAATGAAATGTATAATG
GTCGTGATGGAAAAAACATCGTTAATGCATACATTTTTGGAGATGCCCGATCACCTGAAGCGTGCCTACTGTAGGGTCATTCTACGCAATAACCCATAA
Protein sequenceShow/hide protein sequence
MAVLRLSDELLAKPQLVPSDCTDPKCDRPRYRTQKGEGDKCSWRMLQKGTSFSSYQAGKVQQLTLISYTVPFPDPTDKGILRRTTIPPIRVAWHWKCSNYIEGVLQHETL
VQCRTIMACCLLHNLINREMTNVDTLDDDDDKGDSNYATTVGDDINYIEASNEWTQWRDDLTQSMFNEWQSRNSYMASSSRNPKHAWTRVEESCLVSCLVNLVSAEGWRS
DNGTFRPGYLAQLLRMLAKRMPGCKLTSTTVVESRMNGFGWNDDLQCIVAERDIFDSWVRAHPAAKGLLNKPFSYYDDLSYVFEKDRATGARAEMFTDIESNNPVANDRV
RPKDDLDMEFPSMSSLRMNMSPDDMMSRRPSRSSDVRPSSSGSKRKRIMQQIDSLDVIRDAMDCTNAQLRAIAEWPDKTLQSEAFVWREVLAHLQSIPDLSEEDLMKCIM
VVMEKTSLMHTFLEMPDHLKRAYCRVILRNNP