; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G13230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G13230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionE3 ubiquitin-protein ligase RGLG3-like
Genome locationChr5:12779207..12782055
RNA-Seq ExpressionCSPI05G13230
SyntenyCSPI05G13230
Gene Ontology termsNA
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR010734 - Copine, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025200.1 E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo var. makuwa]2.9e-4786.21Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN
        +DNFQFVNFTKIMSES +ASKKEA FALAALMEIPFQYRATLSLPNSKRES+YGK+AGPLPP PEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTN
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN

Query:  PKNMAFARGHTTLALC
        PK+MAFA GHTT   C
Subjt:  PKNMAFARGHTTLALC

TYK07466.1 E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo var. makuwa]2.9e-4786.21Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN
        +DNFQFVNFTKIMSES +ASKKEA FALAALMEIPFQYRATLSLPNSKRES+YGK+AGPLPP PEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTN
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN

Query:  PKNMAFARGHTTLALC
        PK+MAFA GHTT   C
Subjt:  PKNMAFARGHTTLALC

XP_008462645.1 PREDICTED: E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo]2.9e-4786.21Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN
        +DNFQFVNFTKIMSES +ASKKEA FALAALMEIPFQYRATLSLPNSKRES+YGK+AGPLPP PEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTN
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN

Query:  PKNMAFARGHTTLALC
        PK+MAFA GHTT   C
Subjt:  PKNMAFARGHTTLALC

XP_008462648.1 PREDICTED: E3 ubiquitin-protein ligase RGLG1 isoform X2 [Cucumis melo]2.9e-4786.21Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN
        +DNFQFVNFTKIMSES +ASKKEA FALAALMEIPFQYRATLSLPNSKRES+YGK+AGPLPP PEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTN
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN

Query:  PKNMAFARGHTTLALC
        PK+MAFA GHTT   C
Subjt:  PKNMAFARGHTTLALC

XP_031743945.1 E3 ubiquitin-protein ligase RGLG3 isoform X1 [Cucumis sativus]2.2e-5090.52Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN
        +DNFQFVNFTKIMSESTEASKKEA FALAALMEIPFQYRATLSLPNSKRESVYGK+AGPLPP PEVIN+DNAVANQILEN+KAEKHSSSSESVCPICLTN
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN

Query:  PKNMAFARGHTTLALC
        PK+MAFA GHTT   C
Subjt:  PKNMAFARGHTTLALC

TrEMBL top hitse value%identityAlignment
A0A1S3CHE4 E3 ubiquitin-protein ligase RGLG1 isoform X21.4e-4786.21Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN
        +DNFQFVNFTKIMSES +ASKKEA FALAALMEIPFQYRATLSLPNSKRES+YGK+AGPLPP PEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTN
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN

Query:  PKNMAFARGHTTLALC
        PK+MAFA GHTT   C
Subjt:  PKNMAFARGHTTLALC

A0A1S3CHF5 E3 ubiquitin-protein ligase RGLG1 isoform X11.4e-4786.21Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN
        +DNFQFVNFTKIMSES +ASKKEA FALAALMEIPFQYRATLSLPNSKRES+YGK+AGPLPP PEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTN
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN

Query:  PKNMAFARGHTTLALC
        PK+MAFA GHTT   C
Subjt:  PKNMAFARGHTTLALC

A0A5A7SGD8 E3 ubiquitin-protein ligase RGLG1 isoform X11.4e-4786.21Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN
        +DNFQFVNFTKIMSES +ASKKEA FALAALMEIPFQYRATLSLPNSKRES+YGK+AGPLPP PEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTN
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN

Query:  PKNMAFARGHTTLALC
        PK+MAFA GHTT   C
Subjt:  PKNMAFARGHTTLALC

A0A5D3CAU1 E3 ubiquitin-protein ligase RGLG1 isoform X11.4e-4786.21Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN
        +DNFQFVNFTKIMSES +ASKKEA FALAALMEIPFQYRATLSLPNSKRES+YGK+AGPLPP PEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTN
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN

Query:  PKNMAFARGHTTLALC
        PK+MAFA GHTT   C
Subjt:  PKNMAFARGHTTLALC

A0A6J1KLX5 E3 ubiquitin-protein ligase RGLG3-like isoform X16.8e-4280.17Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN
        +DNFQFVNFTKIMSES E SKKEA FALAALMEIPFQYRATLSL  SKRESVY K+AGP+PP PEVIN+DNAVANQ L  A AE+ SSSSESVCPIC TN
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTN

Query:  PKNMAFARGHTTLALC
        PK+MAFA GHTT   C
Subjt:  PKNMAFARGHTTLALC

SwissProt top hitse value%identityAlignment
Q8LB88 E3 ubiquitin-protein ligase RGLG52.8e-1639.55Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVIN------------------YDNAVANQILENAK
        +DNFQFVNFT IMS++ + ++KEA FAL+ALMEIP QY+ATL L    + + +      LPP                        YDN V++       
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVIN------------------YDNAVANQILENAK

Query:  AEKHSSSSESVCPICLTNPKNMAFARGHTTLALC
        +  H+ S +  CP+CL + KNMAF  GH T A C
Subjt:  AEKHSSSSESVCPICLTNPKNMAFARGHTTLALC

Q8RX26 E3 ubiquitin-protein ligase RGLG32.6e-3062.81Show/hide
Query:  EYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNA---VANQILENA-KAEKHSSSSESVCP
        E+DNFQFVNFTKIMSE  +A+KKEA FALAALMEIPFQY+ATLSL N K      +   PLPP PEVI  DNA   V NQ+ E A K+++ + S+  VCP
Subjt:  EYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNA---VANQILENA-KAEKHSSSSESVCP

Query:  ICLTNPKNMAFARGHTTLALC
        ICLTNPK+MAF+ GHTT   C
Subjt:  ICLTNPKNMAFARGHTTLALC

Q9LY87 E3 ubiquitin-protein ligase RGLG21.4e-1538.97Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPP--------------------LPEVINYDNAVANQILEN
        +DNFQFVNFT+IM+++   S KE  FAL+ALMEIP QY+AT+ L    R + Y     PLPP                     P V  +     +     
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPP--------------------LPEVINYDNAVANQILEN

Query:  AKAEKHSSSSESVCPICLTNPKNMAFARGHTTLALC
              S+S   +CPICL+NPK+MAF  GH T   C
Subjt:  AKAEKHSSSSESVCPICLTNPKNMAFARGHTTLALC

Q9SAL0 E3 ubiquitin-protein ligase RGLG43.0e-1846.15Show/hide
Query:  EYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLT
        E+DNFQFVNFT+IM+ ++  S KE  FALAALMEIPFQY+A + L    +++   KT  P PP        NA        A  E+  S     CPICLT
Subjt:  EYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLT

Query:  NPKNMAFARGHTTLALC
        N K++AF+ GH T   C
Subjt:  NPKNMAFARGHTTLALC

Q9SS90 E3 ubiquitin-protein ligase RGLG13.9e-1842.64Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLP---PLPEVINYDNAVANQILENAK--------AEKHSSS
        +DNFQFVNFT+IMS++ + S+KE  FAL+ALMEIP QY+AT+ L      ++ G   G +P   PLP  +   ++ ++  + N +          K  SS
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLP---PLPEVINYDNAVANQILENAK--------AEKHSSS

Query:  SESV--CPICLTNPKNMAFARGHTTLALC
        ++ +  CPICL+NPKNMAF  GH T   C
Subjt:  SESV--CPICLTNPKNMAFARGHTTLALC

Arabidopsis top hitse value%identityAlignment
AT1G67800.1 Copine (Calcium-dependent phospholipid-binding protein) family2.0e-1739.55Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVIN------------------YDNAVANQILENAK
        +DNFQFVNFT IMS++ + ++KEA FAL+ALMEIP QY+ATL L    + + +      LPP                        YDN V++       
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVIN------------------YDNAVANQILENAK

Query:  AEKHSSSSESVCPICLTNPKNMAFARGHTTLALC
        +  H+ S +  CP+CL + KNMAF  GH T A C
Subjt:  AEKHSSSSESVCPICLTNPKNMAFARGHTTLALC

AT1G79380.1 Ca(2)-dependent phospholipid-binding protein (Copine) family2.1e-1946.15Show/hide
Query:  EYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLT
        E+DNFQFVNFT+IM+ ++  S KE  FALAALMEIPFQY+A + L    +++   KT  P PP        NA        A  E+  S     CPICLT
Subjt:  EYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNAVANQILENAKAEKHSSSSESVCPICLT

Query:  NPKNMAFARGHTTLALC
        N K++AF+ GH T   C
Subjt:  NPKNMAFARGHTTLALC

AT3G01650.1 RING domain ligase12.8e-1942.64Show/hide
Query:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLP---PLPEVINYDNAVANQILENAK--------AEKHSSS
        +DNFQFVNFT+IMS++ + S+KE  FAL+ALMEIP QY+AT+ L      ++ G   G +P   PLP  +   ++ ++  + N +          K  SS
Subjt:  YDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLP---PLPEVINYDNAVANQILENAK--------AEKHSSS

Query:  SESV--CPICLTNPKNMAFARGHTTLALC
        ++ +  CPICL+NPKNMAF  GH T   C
Subjt:  SESV--CPICLTNPKNMAFARGHTTLALC

AT5G63970.1 Copine (Calcium-dependent phospholipid-binding protein) family1.8e-3162.81Show/hide
Query:  EYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNA---VANQILENA-KAEKHSSSSESVCP
        E+DNFQFVNFTKIMSE  +A+KKEA FALAALMEIPFQY+ATLSL N K      +   PLPP PEVI  DNA   V NQ+ E A K+++ + S+  VCP
Subjt:  EYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNA---VANQILENA-KAEKHSSSSESVCP

Query:  ICLTNPKNMAFARGHTTLALC
        ICLTNPK+MAF+ GHTT   C
Subjt:  ICLTNPKNMAFARGHTTLALC

AT5G63970.2 Copine (Calcium-dependent phospholipid-binding protein) family1.8e-3162.81Show/hide
Query:  EYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNA---VANQILENA-KAEKHSSSSESVCP
        E+DNFQFVNFTKIMSE  +A+KKEA FALAALMEIPFQY+ATLSL N K      +   PLPP PEVI  DNA   V NQ+ E A K+++ + S+  VCP
Subjt:  EYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPPLPEVINYDNA---VANQILENA-KAEKHSSSSESVCP

Query:  ICLTNPKNMAFARGHTTLALC
        ICLTNPK+MAF+ GHTT   C
Subjt:  ICLTNPKNMAFARGHTTLALC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATATTGGTGGCCTCTGAAACTTGATGAAGTTCAAGATGACCCTTCTAACAAAAGGAGAATAATTTGTGAGGAGAAGTTAAAAGAACTTTTTGATGTTGATTCCTT
TAATGGACTCACTGCTGCAACCAACACAGTCGAATATGATAATTTCCAGTTTGTAAACTTCACAAAGATCATGTCTGAGAGCACAGAAGCGTCAAAGAAGGAAGCAACAT
TTGCCTTGGCCGCACTCATGGAAATTCCATTTCAATACAGAGCTACCCTCTCCTTGCCAAATTCAAAGAGAGAATCTGTATATGGAAAAACTGCGGGGCCACTTCCTCCT
CTTCCTGAAGTCATCAATTATGACAATGCAGTTGCAAACCAAATTTTGGAGAATGCAAAAGCTGAAAAACATAGTTCCTCATCTGAATCGGTCTGCCCCATATGCCTCAC
AAACCCAAAGAACATGGCTTTTGCACGTGGTCATACAACTCTGGCCTTATGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATATTGGTGGCCTCTGAAACTTGATGAAGTTCAAGATGACCCTTCTAACAAAAGGAGAATAATTTGTGAGGAGAAGTTAAAAGAACTTTTTGATGTTGATTCCTT
TAATGGACTCACTGCTGCAACCAACACAGTCGAATATGATAATTTCCAGTTTGTAAACTTCACAAAGATCATGTCTGAGAGCACAGAAGCGTCAAAGAAGGAAGCAACAT
TTGCCTTGGCCGCACTCATGGAAATTCCATTTCAATACAGAGCTACCCTCTCCTTGCCAAATTCAAAGAGAGAATCTGTATATGGAAAAACTGCGGGGCCACTTCCTCCT
CTTCCTGAAGTCATCAATTATGACAATGCAGTTGCAAACCAAATTTTGGAGAATGCAAAAGCTGAAAAACATAGTTCCTCATCTGAATCGGTCTGCCCCATATGCCTCAC
AAACCCAAAGAACATGGCTTTTGCACGTGGTCATACAACTCTGGCCTTATGTGTTTGA
Protein sequenceShow/hide protein sequence
MAYWWPLKLDEVQDDPSNKRRIICEEKLKELFDVDSFNGLTAATNTVEYDNFQFVNFTKIMSESTEASKKEATFALAALMEIPFQYRATLSLPNSKRESVYGKTAGPLPP
LPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKNMAFARGHTTLALCV