; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G13260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G13260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGRIP/coiled-coil protein
Genome locationChr5:12820023..12825149
RNA-Seq ExpressionCSPI05G13260
SyntenyCSPI05G13260
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579058.1 hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2789.04Show/hide
Query:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GR R+G + SGGGFLKA FR LKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_008463128.1 PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo]1.9e-3095.89Show/hide
Query:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA+GR RNG+DSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_011655131.2 uncharacterized protein LOC101207856 [Cucumis sativus]4.5e-32100Show/hide
Query:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_022938472.1 uncharacterized protein LOC111444698 [Cucurbita moschata]1.3e-2687.67Show/hide
Query:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GR R+G + SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_023549700.1 uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo]1.3e-2689.04Show/hide
Query:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GR R+  + SGGGFLKA FRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
TrEMBL top hitse value%identityAlignment
A0A0A0KPT8 Uncharacterized protein2.2e-32100Show/hide
Query:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A1S3CK24 uncharacterized protein LOC1035013539.2e-3195.89Show/hide
Query:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA+GR RNG+DSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1CIZ9 uncharacterized protein LOC1110117891.5e-2583.56Show/hide
Query:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MAR  GR RNG DS+  GFLKA  RFLKMAEFEILF+LFF+VAFI+FKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1FE48 uncharacterized protein LOC1114446986.1e-2787.67Show/hide
Query:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GR R+G + SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1K0Z3 uncharacterized protein LOC1114896598.0e-2787.67Show/hide
Query:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MA A GR R+G + SGGGFLK  FRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G14430.1 unknown protein6.3e-1662.96Show/hide
Query:  FLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF
        F+ + F F ++AEFEILFVLF ++ +++FKDLTSRPEYN+ILV+KP G D+WPF
Subjt:  FLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGT
TCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGT
AA
mRNA sequenceShow/hide mRNA sequence
ATTAAAAATGGTCATCCAAATATAGGATGTTAAGGATAATTATGGAAATATGGTGGTTTAAAAAGTTGAAAGAGTAAAGCATATGTTTATAAAAGTTCCCAAATCAAAAT
AAAACAAGATACTGATAAAACAGAGAATTGATAGTCTTTCACCAACTGTGTATCTGAACAGAGGAAAGCCCTCTAAACTTGCCTCCAACCATTCTTGATCGTTGAAGAGA
AACCGCGGTTCCTCAATAAAGCAGCGGTCATCGTCGGTGGCTATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCAC
TTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAACCAAATTC
TTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGTAAATTCTCGACTTCCCATTCATGTGATCCGATTCAATACTCACTCTCAAACTTTCTAAGTTTGTATCT
GTTTATGTTGATGTGCAGGATGATGTAAAAATGACCATCGACGTGTCTCTCTTTTTTTTTCTTTTTTTTTTGTTGATTTTTTCCTTAAGTTGAGAGATGTAAAAATGTTC
ATCAATATGTCGACAGTTTTATTCGATATTATCAAGTGGAAAGACATAAAAATGTTCGTGTTGATATTGTCAAAGTCAGATTTTGAAGCAAGTCTTAGACAAGATGGAGA
GGTGTTCAAGAAGTCATAATAAAAATGCTAAATGATAAATAATATATGTGTTACCATAC
Protein sequenceShow/hide protein sequence
MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ