CuGenDBv2

Gene ID	CSPI05G13420
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DAR GTPase 3, chloroplastic
Genome location	Chr5:13115655..13116988
RNA-Seq Expression	CSPI05G13420
Synteny	CSPI05G13420
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0066191.1 DAR GTPase 3 [Cucumis melo var. makuwa]

1.8e-26

84.72

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Query:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
        IL+  ++   S GIE+LQKRYKVDAGGQCG IFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
Subjt:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

XP_008463116.1 PREDICTED: DAR GTPase 3, chloroplastic [Cucumis melo]

1.8e-26

84.72

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Query:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
        IL+  ++   S GIE+LQKRYKVDAGGQCG IFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
Subjt:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

XP_011655122.1 DAR GTPase 3, chloroplastic [Cucumis sativus]

1.6e-27

87.5

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Query:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
        IL+  ++   S GIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
Subjt:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

XP_038887631.1 DAR GTPase 3, chloroplastic isoform X1 [Benincasa hispida]

4.3e-25

80.56

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Query:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
        IL+  ++   S GIE+LQKRYKVDA GQCG IF+QKLALQLFNGD+HQAAFRILSDFRKGKFGWTALERPPR
Subjt:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

XP_038887632.1 DAR GTPase 3, chloroplastic isoform X2 [Benincasa hispida]

4.3e-25

80.56

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Query:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
        IL+  ++   S GIE+LQKRYKVDA GQCG IF+QKLALQLFNGD+HQAAFRILSDFRKGKFGWTALERPPR
Subjt:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPR0 Uncharacterized protein

1.1e-42

100

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Query:  MFTFLPAEMVCFIILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
        MFTFLPAEMVCFIILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
Subjt:  MFTFLPAEMVCFIILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

A0A1S3CIW2 DAR GTPase 3, chloroplastic

8.5e-27

84.72

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Query:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
        IL+  ++   S GIE+LQKRYKVDAGGQCG IFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
Subjt:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

A0A5D3CV40 DAR GTPase 3

8.5e-27

84.72

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Query:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
        IL+  ++   S GIE+LQKRYKVDAGGQCG IFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
Subjt:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

A0A6J1DPX2 DAR GTPase 3, chloroplastic isoform X1

2.3e-24

79.17

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Query:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
        IL+  ++   S GIE+LQKRY+VDA GQCG IFVQKLALQLFNGD+HQAAFRILSDFRKGKFGW ALERPPR
Subjt:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

A0A6J1HIQ5 DAR GTPase 3, chloroplastic

1.8e-24

80.56

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Query:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR
        IL+  ++   S GIE LQKRYKVDA GQCG IFVQKLALQLFNGD+HQAAFRILSDFRKGKFGW ALERPPR
Subjt:  ILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

SwissProt top hits

e value

%identity

Alignment

Q8H1F6 DAR GTPase 3, chloroplastic

2.9e-16

62.71

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Query:  GIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPP
        G + L  RYK+   G CG+ FV+ L L LF GD+HQAAFRIL+DFRKGKFG+ +LERPP
Subjt:  GIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPP

Arabidopsis top hits

e value

%identity

Alignment

AT4G02790.1 GTP-binding family protein

2.1e-17

62.71

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Query:  GIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPP
        G + L  RYK+   G CG+ FV+ L L LF GD+HQAAFRIL+DFRKGKFG+ +LERPP
Subjt:  GIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPP

Sequences

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CDS sequence

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mRNA sequence

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ATGAAGAAATCCAGAGGCTGTTTCCAGAAATTCACCTTGAGGACAAGGATGTTCACTTTTTTACCTGCTGAAATGGTATGTTTCATAATTTTGATGAATGACATTAGCTT
TTGGGAATCTCCAGGTATAGAAACACTTCAAAAGCGGTACAAAGTTGATGCAGGCGGTCAGTGTGGTCAAATATTTGTTCAAAAGTTAGCCCTCCAATTGTTCAACGGGG
ACAATCATCAAGCAGCTTTTCGCATCTTATCGGATTTTCGCAAAGGAAAGTTTGGTTGGACTGCTTTGGAGAGGCCTCCCAGGTAATGCTGTTGGATGATGGTTTGCTTG
AAGGTCAGAATTTGAGCTTCTCGCTCTTACACTAGTTGTACAGATTCTAAAGGCCACTCTCAAACTGAGAAGAAATTCACGATGCTTATATTGCTTTCGACTTGCGGACT
TGTGGGAAGCTCAAAATTGGAGACCTTGATCATAAATGGTAATGAATCTCATTAATTTGTGAAGCCATTGTGATCATGTATTATATGCTTTTACATCACTCATGTAATTA
AAACAATCGTTTTGGTTAACCTACAATTGTATCCCAAATGAAATTCGTAGTTCTTTACTATTAATATCTTTATCATATGGTCCTATGTGTTGCACATTGTACATTGTTTA
GGCATTATATAATTCTGGCAAAAAAGATGGATATATTTTACTAGAAATGAATCAGAACGGGTACATTT

Protein sequence

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MKKSRGCFQKFTLRTRMFTFLPAEMVCFIILMNDISFWESPGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR

CSPI05G13420 (gene) of Cucumber (PI 183967) v1 genome