CuGenDBv2

Gene ID	CSPI05G13540
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transcription initiation factor TFIID subunit 11-like
Genome location	Chr5:13300081..13301250
RNA-Seq Expression	CSPI05G13540
Synteny	CSPI05G13540
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0066209.1 acidic repeat-containing protein [Cucumis melo var. makuwa]

3.4e-90

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
        MAEITNR+EEVAFDAKRKP DSCFQPKEE SNKIQKLEVVEGEESCNYV NNAENGDHKGSDEQ+DN+SSTVLEGK DDGVDGASLDAGDEEEDYEDEDD
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD

Query:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGS LDSEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL NDDDDSSDSDA
Subjt:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA

XP_004150738.1 nucleolin [Cucumis sativus]

8.3e-97

100

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
        MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD

Query:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA
        SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA
Subjt:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA

XP_008441603.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo]

3.0e-86

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
        MAEITNREEEVAFD KRKP DSCFQPK+ERSNKIQKLEVV GEESC+YV NNAENGDHKGSDE++DN+SSTVLEGK DDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD

Query:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS LDS+ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDL NDDDDSSDSDA
Subjt:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA

XP_008463121.1 PREDICTED: acidic repeat-containing protein [Cucumis melo]

1.1e-88

93.07

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
        MAEITNR+EEVAFDAKRKP DSCFQPKEE SNKIQKLEVVEGEESCNYV NNAENGDHKGSDEQ+DN+SSTVLEGK DDGVDGASLDAGDEEEDYEDEDD
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD

Query:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEE--DDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDS
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEE  DDDDDEDSSDDGS LDSEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL NDDDDSSDS
Subjt:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEE--DDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDS

Query:  DA
        DA
Subjt:  DA

XP_038906649.1 pheromone-processing carboxypeptidase KEX1 [Benincasa hispida]

3.4e-74

83.58

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGD-HKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDED
        MAE T   EEVAFDAKRKP D C + KEERSNK+QKLEVVEGEESCN V  N ENGD HK +DE +DN+SS+V EGK DDGV GA LDAGDE ED EDED
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGD-HKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDED

Query:  DSEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSD
        DSE+ EKSS K AEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGS+LDSEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDLGNDDDDSSDSD
Subjt:  DSEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSD

Query:  A
        A
Subjt:  A

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KMR8 Uncharacterized protein

4.0e-97

100

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
        MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD

Query:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA
        SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA
Subjt:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA

A0A1S3B3S7 transcription initiation factor TFIID subunit 11-like

1.4e-86

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
        MAEITNREEEVAFD KRKP DSCFQPK+ERSNKIQKLEVV GEESC+YV NNAENGDHKGSDE++DN+SSTVLEGK DDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD

Query:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS LDS+ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDL NDDDDSSDSDA
Subjt:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA

A0A1S3CIW7 acidic repeat-containing protein

5.3e-89

93.07

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
        MAEITNR+EEVAFDAKRKP DSCFQPKEE SNKIQKLEVVEGEESCNYV NNAENGDHKGSDEQ+DN+SSTVLEGK DDGVDGASLDAGDEEEDYEDEDD
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD

Query:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEE--DDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDS
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEE  DDDDDEDSSDDGS LDSEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL NDDDDSSDS
Subjt:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEE--DDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDS

Query:  DA
        DA
Subjt:  DA

A0A5D3B8T5 Transcription initiation factor TFIID subunit 11-like

1.4e-86

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
        MAEITNREEEVAFD KRKP DSCFQPK+ERSNKIQKLEVV GEESC+YV NNAENGDHKGSDE++DN+SSTVLEGK DDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD

Query:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS LDS+ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDL NDDDDSSDSDA
Subjt:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA

A0A5D3E1E7 Acidic repeat-containing protein

1.6e-90

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD
        MAEITNR+EEVAFDAKRKP DSCFQPKEE SNKIQKLEVVEGEESCNYV NNAENGDHKGSDEQ+DN+SSTVLEGK DDGVDGASLDAGDEEEDYEDEDD
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDD

Query:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGS LDSEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL NDDDDSSDSDA
Subjt:  SEDDEKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12830.1 unknown protein

4.1e-25

43.44

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Query:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNIS----------STVLEGKGDDGVD-GASLDAG
        MA++ N+++  +F  KRK +D   Q ++  +NK QKL       S N  ++ +++G+  GS  Q++N++          S+VL  K  + V+ G   D G
Subjt:  MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNIS----------STVLEGKGDDGVD-GASLDAG

Query:  DEEEDYEDEDDSEDD-EKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQ----LDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYF
         EEE  ++ED+ EDD E+   +   DRKGKGI ++DKGKGK+IE ++ DDED SDD        + +ESD SDDPLAEVDLDNILPSRTRRR+  PGV+ 
Subjt:  DEEEDYEDEDDSEDD-EKSSAKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQ----LDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYF

Query:  ATDLGN-----DDDDSSDSDA
          +  N     +DD+SSDSDA
Subjt:  ATDLGN-----DDDDSSDSDA

Sequences

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CDS sequence

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ATGGCGGAAATTACCAATAGAGAGGAAGAGGTCGCATTTGATGCGAAGCGGAAACCTACTGATTCTTGCTTCCAACCCAAAGAGGAGCGTTCCAACAAAATTCAGAAGCT
CGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAACAACAATGCTGAGAATGGTGACCATAAGGGAAGTGATGAACAGGTTGATAATATTTCTTCTACGGTTCTGG
AAGGGAAGGGTGACGATGGAGTTGATGGAGCTAGTTTAGATGCGGGAGATGAGGAGGAGGATTATGAGGACGAAGACGATAGTGAGGATGATGAAAAATCGAGTGCGAAA
GTGGCTGAGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGACGACGACGACGATGAAGATTCCAGTGATGATGGAAGCCA
ATTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCGCTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAACGGTTCACCCTGGAGTTTATT
TCGCTACGGATCTGGGGAACGACGACGATGATAGCAGTGATAGCGATGCTTGA

mRNA sequence

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CAATTTGGAACTGGGAAATTATGATCCTGCTTTCGTTTCCTGAATTCATTGATTCTCGTTCACTTTCTTCTTCAAAACCCTAATTTTTTATTCTTCCATTGATTCAACAG
TTAGTTTTCGAAGCTTCTTCAATTCTACCGGTTTTGCGCCACATTGAATGGCGGAAATTACCAATAGAGAGGAAGAGGTCGCATTTGATGCGAAGCGGAAACCTACTGAT
TCTTGCTTCCAACCCAAAGAGGAGCGTTCCAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAACAACAATGCTGAGAATGGTGACCA
TAAGGGAAGTGATGAACAGGTTGATAATATTTCTTCTACGGTTCTGGAAGGGAAGGGTGACGATGGAGTTGATGGAGCTAGTTTAGATGCGGGAGATGAGGAGGAGGATT
ATGAGGACGAAGACGATAGTGAGGATGATGAAAAATCGAGTGCGAAAGTGGCTGAGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATA
GAGGAAGACGACGACGACGATGAAGATTCCAGTGATGATGGAAGCCAATTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCGCTTGCGGAGGTCGATTTGGACAACAT
CCTTCCTTCAAGGACGAGGAGGCGAACGGTTCACCCTGGAGTTTATTTCGCTACGGATCTGGGGAACGACGACGATGATAGCAGTGATAGCGATGCTTGAAACGTTCAAG
AAGGTCAGTAAAATTCGGCAATCGAACCTTGGAGTTAGTACAACTGATATGAGTTGATGTTTCTCAGTTTTATCTTCTTTAGGGATAATGCAGCAATGTAATGAGTTACT
CCAACAATTTGATTTTTAAGGTTACATGTTTTCTTGTTTTTCCACTTTGATATCGGTAGCATTGAGGATCGCTTGCATCTATGGCTTTCTTTAATACGCCTTTTTCTTAG
AAGTTTTTCTTTGTAGGGGGATTGTACTCATCAATCCAATCTTAATTGTAAGCCAAAAGTAATGGATAACAATGGAGTTTGTAACATTTGATTCTTCACTTATTGGATAT
GTTAGTGATGCCAAATACTCTTGCACATTGAAAAGCAGTTTTTTTTAGATTTAGAACATCTCTTCCAAGC

Protein sequence

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MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKGSDEQVDNISSTVLEGKGDDGVDGASLDAGDEEEDYEDEDDSEDDEKSSAK
VAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA

CSPI05G13540 (gene) of Cucumber (PI 183967) v1 genome