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CSPI05G13620 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G13620
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr5:13457865..13459914
RNA-Seq ExpressionCSPI05G13620
SyntenyCSPI05G13620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648168.1 hypothetical protein Csa_018354 [Cucumis sativus]1.3e-1371.62Show/hide
Query:  PSFSFAVAAGR--LPSRFFSVRPPQPSRLRLKSSRRPDLRSCRTFVCAGLRSETSRSNLPCTLLLGSTGALTFL
        P   FA A+ R   P+   S+R PQPSRLRLKSSRRPDLRS  TFVCAGL  E SRSNLPCTLLLGSTGALT L
Subjt:  PSFSFAVAAGR--LPSRFFSVRPPQPSRLRLKSSRRPDLRSCRTFVCAGLRSETSRSNLPCTLLLGSTGALTFL
KAE8648360.1 hypothetical protein Csa_024004, partial [Cucumis sativus]2.1e-59100Show/hide
Query:  PNIASQAATSPLLAFRPCGLLKPKPVVAFLFAIRLQPSRLEPLRPSHFATDQSPIEAARLFLVRSATATASHFFPSFSFAVAAGRLPSRFFSVRPPQPSR
        PNIASQAATSPLLAFRPCGLLKPKPVVAFLFAIRLQPSRLEPLRPSHFATDQSPIEAARLFLVRSATATASHFFPSFSFAVAAGRLPSRFFSVRPPQPSR
Subjt:  PNIASQAATSPLLAFRPCGLLKPKPVVAFLFAIRLQPSRLEPLRPSHFATDQSPIEAARLFLVRSATATASHFFPSFSFAVAAGRLPSRFFSVRPPQPSR

Query:  LRLKSSRRPDLRSCRTFVCAGLR
        LRLKSSRRPDLRSCRTFVCAGLR
Subjt:  LRLKSSRRPDLRSCRTFVCAGLR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAATTATTATCACTTTAAAAAGAAAAAGAAAAGAAAAGAAAGGGAAATTAAAATTTCCTTTCTTCTTCTTCCTCCCGCGCCCCCCTTCTTCTGTTTTTCTTCTTCTTCG
TTCTTGTGCCCTAGCCACTTATCACACTCCAACCTCACCGCCAGCCACCTTCAATTTTCTCTTTTTTTTTCGTTCACCCGTCGACATCAGTAGCCCAAACATCGCATCCC
AGGCCGCCACATCCCCGCTGCTCGCGTTTCGCCCTTGCGGTTTGTTGAAGCCAAAACCGGTCGTCGCGTTTTTGTTTGCGATTCGTCTCCAACCGTCACGCCTCGAGCCG
CTGCGTCCTTCACACTTCGCGACCGACCAAAGCCCAATCGAAGCCGCACGTCTTTTTCTCGTCAGATCCGCGACCGCCACCGCCTCCCATTTTTTTCCCTCTTTTTCGTT
CGCTGTAGCCGCCGGCCGCCTCCCCAGCCGCTTCTTCTCCGTTCGTCCACCACAACCGTCGCGCCTCCGTCTGAAATCAAGCCGTCGTCCAGATCTGCGAAGCTGCCGCA
CCTTCGTCTGCGCCGGTCTTCGTAGCGAAACCAGCCGTTCTAATCTGCCTTGCACGCTGTTGCTTGGGTCGACTGGTGCACTAACGTTTCTGCCTTGCCACGAAGAATAT
TGGGGTTTTGTGCTGTCAATTGTGGAGAGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
TTAATTATTATCACTTTAAAAAGAAAAAGAAAAGAAAAGAAAGGGAAATTAAAATTTCCTTTCTTCTTCTTCCTCCCGCGCCCCCCTTCTTCTGTTTTTCTTCTTCTTCG
TTCTTGTGCCCTAGCCACTTATCACACTCCAACCTCACCGCCAGCCACCTTCAATTTTCTCTTTTTTTTTCGTTCACCCGTCGACATCAGTAGCCCAAACATCGCATCCC
AGGCCGCCACATCCCCGCTGCTCGCGTTTCGCCCTTGCGGTTTGTTGAAGCCAAAACCGGTCGTCGCGTTTTTGTTTGCGATTCGTCTCCAACCGTCACGCCTCGAGCCG
CTGCGTCCTTCACACTTCGCGACCGACCAAAGCCCAATCGAAGCCGCACGTCTTTTTCTCGTCAGATCCGCGACCGCCACCGCCTCCCATTTTTTTCCCTCTTTTTCGTT
CGCTGTAGCCGCCGGCCGCCTCCCCAGCCGCTTCTTCTCCGTTCGTCCACCACAACCGTCGCGCCTCCGTCTGAAATCAAGCCGTCGTCCAGATCTGCGAAGCTGCCGCA
CCTTCGTCTGCGCCGGTCTTCGTAGCGAAACCAGCCGTTCTAATCTGCCTTGCACGCTGTTGCTTGGGTCGACTGGTGCACTAACGTTTCTGCCTTGCCACGAAGAATAT
TGGGGTTTTGTGCTGTCAATTGTGGAGAGTGTTTGAATTTTTGGGTTCACGAAAGTTGCTTCAAGTCCAATTCTCTATTTAATTTGAGTTCGTTCGTTGCATTGTAGCTT
GAAAAAGGAGCTTAAGCAAGGTTAAGAACACTAGACTGAAATGTACGTCCCTTGGGTGTTAGACTGATAGACGGTGACTGTGCAAGGCAAAGGTAACAAAGGTGGCAAAC
TGGCGAGGGGCAGAAAGGAAGTGACATCTTTGTTTTGCTTCCGCTTTATGTTTTTTATGTTTAAAACCTTATGTTTAAGTTTACCTTACGAACTATTACTTTGGTAAATA
GTATATATATATATATTTTTTTTAAGTTTTAGTTGCTTGAAACCGGG
Protein sequenceShow/hide protein sequence
LIIITLKRKRKEKKGKLKFPFFFFLPRPPSSVFLLLRSCALATYHTPTSPPATFNFLFFFRSPVDISSPNIASQAATSPLLAFRPCGLLKPKPVVAFLFAIRLQPSRLEP
LRPSHFATDQSPIEAARLFLVRSATATASHFFPSFSFAVAAGRLPSRFFSVRPPQPSRLRLKSSRRPDLRSCRTFVCAGLRSETSRSNLPCTLLLGSTGALTFLPCHEEY
WGFVLSIVESV