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CSPI05G13920 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G13920
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S ribosomal protein L21-1
Genome locationChr5:14046124..14046291
RNA-Seq ExpressionCSPI05G13920
SyntenyCSPI05G13920
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001147 - Ribosomal protein L21e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBS2599571.1 hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium]7.4e-1987.27Show/hide
Query:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        VKNDELK EAKAKG VICTKRQPEGPK GFMVEGALME VTPIPY+VVN++KGGY
Subjt:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

XP_004140433.3 60S ribosomal protein L21-1 [Cucumis sativus]7.4e-1987.27Show/hide
Query:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        VKNDELK EAKAKG VICTKRQPEGPK GFMVEGALME VTPIPY+VVN++KGGY
Subjt:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

XP_008443016.1 PREDICTED: 60S ribosomal protein L21-1 [Cucumis melo]2.5e-1989.09Show/hide
Query:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        VKNDELK EAKAKGVVICTKRQPEGPK GFMVEGALME VTPIPY+VVN++KGGY
Subjt:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

XP_031737587.1 60S ribosomal protein L21-1-like [Cucumis sativus]7.4e-1987.27Show/hide
Query:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        VKNDELK EAKAKG VICTKRQPEGPK GFMVEGALME VTPIPY+VVN++KGGY
Subjt:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

XP_031739289.1 60S ribosomal protein L21-1 [Cucumis sativus]7.4e-1987.27Show/hide
Query:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        VKNDELK EAKAKG VICTKRQPEGPK GFMVEGALME VTPIPY+VVN++KGGY
Subjt:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ0 Uncharacterized protein3.6e-1987.27Show/hide
Query:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        VKNDELK EAKAKG VICTKRQPEGPK GFMVEGALME VTPIPY+VVN++KGGY
Subjt:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

A0A1S3B7V0 60S ribosomal protein L21-11.2e-1989.09Show/hide
Query:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        VKNDELK EAKAKGVVICTKRQPEGPK GFMVEGALME VTPIPY+VVN++KGGY
Subjt:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

A0A5D3DP20 60S ribosomal protein L21-11.2e-1989.09Show/hide
Query:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        VKNDELK EAKAKGVVICTKRQPEGPK GFMVEGALME VTPIPY+VVN++KGGY
Subjt:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

A0A6J1IYF0 60S ribosomal protein L21-11.4e-1885.45Show/hide
Query:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        VKND+LK EAKAKG VICTKRQPEGPK GFMVEGALME VTPIPY+VVN++KGGY
Subjt:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

A0A6J1J6F8 60S ribosomal protein L21-1-like1.4e-1885.45Show/hide
Query:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        VKND+LK EAKAKG VICTKRQPEGPK GFMVEGALME VTPIPY+VVN++KGGY
Subjt:  VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

SwissProt top hitse value%identityAlignment
Q43291 60S ribosomal protein L21-13.6e-1672.22Show/hide
Query:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        KNDELK  AKA G  I TKRQP+GPK GFMVEG  +E VTPIPY+VVN++KGGY
Subjt:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

Q9FDZ9 60S ribosomal protein L21-21.8e-1568.52Show/hide
Query:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        +ND LK +AKA+G  I TKRQP+GPK GFMVEG  +E VTPIPY+VVN++KGGY
Subjt:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

Arabidopsis top hitse value%identityAlignment
AT1G09590.1 Translation protein SH3-like family protein2.5e-1772.22Show/hide
Query:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        KNDELK  AKA G  I TKRQP+GPK GFMVEG  +E VTPIPY+VVN++KGGY
Subjt:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

AT1G09690.1 Translation protein SH3-like family protein2.5e-1772.22Show/hide
Query:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        KNDELK  AKA G  I TKRQP+GPK GFMVEG  +E VTPIPY+VVN++KGGY
Subjt:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

AT1G57660.1 Translation protein SH3-like family protein1.3e-1668.52Show/hide
Query:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        +ND LK +AKA+G  I TKRQP+GPK GFMVEG  +E VTPIPY+VVN++KGGY
Subjt:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY

AT1G57860.1 Translation protein SH3-like family protein1.3e-1668.52Show/hide
Query:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY
        +ND LK +AKA+G  I TKRQP+GPK GFMVEG  +E VTPIPY+VVN++KGGY
Subjt:  KNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGAAGAATGACGAGCTAAAGACCGAAGCCAAGGCCAAAGGCGTAGTCATATGCACCAAGAGGCAACCGGAAGGCCCCAAAACAGGGTTCATGGTTGAAGGTGCTTTAAT
GGAGGTTGTAACTCCCATTCCATACAACGTGGTTAATAATATCAAGGGCGGCTATTAG
mRNA sequenceShow/hide mRNA sequence
GTGAAGAATGACGAGCTAAAGACCGAAGCCAAGGCCAAAGGCGTAGTCATATGCACCAAGAGGCAACCGGAAGGCCCCAAAACAGGGTTCATGGTTGAAGGTGCTTTAAT
GGAGGTTGTAACTCCCATTCCATACAACGTGGTTAATAATATCAAGGGCGGCTATTAG
Protein sequenceShow/hide protein sequence
VKNDELKTEAKAKGVVICTKRQPEGPKTGFMVEGALMEVVTPIPYNVVNNIKGGY