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CSPI05G14020 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G14020
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranslocase subunit seca
Genome locationChr5:14243666..14245143
RNA-Seq ExpressionCSPI05G14020
SyntenyCSPI05G14020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047427.1 uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa]1.1e-7895.36Show/hide
Query:  MQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP
        M++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE FNSSNTQLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS 
Subjt:  MQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP

Query:  AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        AASPPLSPPPSAGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

KAG7032498.1 hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6581.65Show/hide
Query:  EEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKL
        E M+ A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLFLKGGC LENFNSS+TQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+
Subjt:  EEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKL

Query:  LPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LP+FSP  A PP SPPPS  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

XP_004140334.1 uncharacterized protein LOC101221533 [Cucumis sativus]9.5e-8899.37Show/hide
Query:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
        MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSN QLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
Subjt:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK

Query:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

XP_008465783.1 PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo]4.9e-8495.57Show/hide
Query:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
        MNWVCEEM++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE FNSSNTQLASS PYFCGSPPSRVANPLIQDARFGDEKPK
Subjt:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK

Query:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LLPLFS AASPPLSPPPSAGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

XP_038906747.1 uncharacterized protein LOC120092671 [Benincasa hispida]1.1e-8092.41Show/hide
Query:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
        MNWVCEEM TAA DRRER+VCPKPRRLGL+ND  NDNPFRHRFDSDALDLLF KGGCGLENFNSS+TQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
Subjt:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK

Query:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LLPLFSPAASPP SPPPSAGRKGGCVR+NFG NPAVRIEGFDCRLDRERRNRS+PALA
Subjt:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

TrEMBL top hitse value%identityAlignment
A0A0A0KRF1 Uncharacterized protein4.6e-8899.37Show/hide
Query:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
        MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSN QLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
Subjt:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK

Query:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

A0A1S3CR46 uncharacterized protein LOC1035033852.4e-8495.57Show/hide
Query:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
        MNWVCEEM++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE FNSSNTQLASS PYFCGSPPSRVANPLIQDARFGDEKPK
Subjt:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK

Query:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LLPLFS AASPPLSPPPSAGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

A0A5D3C147 Uncharacterized protein5.1e-7995.36Show/hide
Query:  MQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP
        M++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE FNSSNTQLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS 
Subjt:  MQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP

Query:  AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        AASPPLSPPPSAGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

A0A6J1E6Z2 uncharacterized protein LOC1114311742.5e-6581.37Show/hide
Query:  VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEK
        V EEM  AA TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF KGGC LENFNSS+TQLASSPPY CG+PPSRVANPLIQDARFG+EK
Subjt:  VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEK

Query:  PKLLPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        PK+LP+FSP  A PP SPPPS  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PKLLPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

A0A6J1I2X1 uncharacterized protein LOC1114704609.4e-6580.38Show/hide
Query:  EEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKL
        E M+ A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF KGGC LENF SS+TQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+
Subjt:  EEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKL

Query:  LPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LP+FSP  A PP SPPPS  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein1.6e-2441.52Show/hide
Query:  EEMQ--TAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDALDLLFLKGGCGLENFNSSNTQLASSPP-YFCGSPPSRVANPLIQDA
        EEM+   A +DRR+ ++CPKPRR+G +N   + +      H+ +       S+ LD +  KGG G        T+   +PP +F GSPPSRV+NPL +D+
Subjt:  EEMQ--TAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDALDLLFLKGGCGLENFNSSNTQLASSPP-YFCGSPPSRVANPLIQDA

Query:  RFGDEKPKLLPLFSPAASPPLS---PPPSAGRKGGCV--RVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
         F +E   LL + SP+ S P +    PPS+ R G CV    +FG NP VR+ GFDC  DR   NRSI  LA
Subjt:  RFGDEKPKLLPLFSPAASPPLS---PPPSAGRKGGCV--RVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

AT1G13390.2 unknown protein1.6e-2441.52Show/hide
Query:  EEMQ--TAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDALDLLFLKGGCGLENFNSSNTQLASSPP-YFCGSPPSRVANPLIQDA
        EEM+   A +DRR+ ++CPKPRR+G +N   + +      H+ +       S+ LD +  KGG G        T+   +PP +F GSPPSRV+NPL +D+
Subjt:  EEMQ--TAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDALDLLFLKGGCGLENFNSSNTQLASSPP-YFCGSPPSRVANPLIQDA

Query:  RFGDEKPKLLPLFSPAASPPLS---PPPSAGRKGGCV--RVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
         F +E   LL + SP+ S P +    PPS+ R G CV    +FG NP VR+ GFDC  DR   NRSI  LA
Subjt:  RFGDEKPKLLPLFSPAASPPLS---PPPSAGRKGGCV--RVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

AT1G68490.1 unknown protein1.9e-3050Show/hide
Query:  IVCPKPRRLGLINDTCNDNP-----FRHRF-------DSDALDLLFLKGGCGLENFNSSNTQLASSP-PYFCGSPPSRVANPLIQDARFGDEKPKLLPLF
        +VCPKPRR+GL N+  + +      F H+        ++D LD++  K G G E  N    Q+  SP P+ CGSPPSRVANPL QDARF DE   +  + 
Subjt:  IVCPKPRRLGLINDTCNDNP-----FRHRF-------DSDALDLLFLKGGCGLENFNSSNTQLASSP-PYFCGSPPSRVANPLIQDARFGDEKPKLLPLF

Query:  SP--AASPPLSPPPSAGRKGGC-VRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
         P     P  SP  S+GRKGGC VR NFG +P VR+EGFDC LDR+ RN SIPALA
Subjt:  SP--AASPPLSPPPSAGRKGGC-VRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

AT3G02555.1 unknown protein1.4e-2551.37Show/hide
Query:  ERIVCPKPRRLGLINDTCNDNPFRHRFD-SDALDLLFLKGGCG-LENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLS
        + +VCPKPRR   +       PFR  F  S A D+   K G   L+ F    +  + SPP+F GSPPSR ANPL QDARFGDEK   L   SP+ SP L 
Subjt:  ERIVCPKPRRLGLINDTCNDNPFRHRFD-SDALDLLFLKGGCG-LENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLS

Query:  PPPSAGR-KGGCVRVNFGKNPA-VRIEGFDCRLDRERRNRSIPALA
          PSA R K GC R+ FG  PA VR+EGFDC L+R+R N SIPA+A
Subjt:  PPPSAGR-KGGCVRVNFGKNPA-VRIEGFDCRLDRERRNRSIPALA

AT5G16110.1 unknown protein4.1e-2847.83Show/hide
Query:  DRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL-------ENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEK--------
        DR++ +VCPKPRR+GL+ +     P R      A DL   K G  L       E+  +    L+SSPPYF GSPPSR ANPL QDARF DEK        
Subjt:  DRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL-------ENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEK--------

Query:  PKLLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKN-PAVRIEGFDCRLDRERRNRSIPALA
        P L P +S    P  S   S+    GCVR+ FG N PAVR+EGFDC L+R+R+N SIPA+A
Subjt:  PKLLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKN-PAVRIEGFDCRLDRERRNRSIPALA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGGGTTTGTGAAGAGATGCAAACCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCAAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAA
CCCATTTAGACACCGGTTTGATTCAGATGCTCTGGATCTCCTCTTCTTAAAGGGTGGTTGTGGTTTGGAGAATTTTAACAGTAGTAATACACAATTAGCCTCGTCGCCGC
CGTATTTTTGTGGATCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTGCCCCTCTTTTCGCCGGCGGCTTCT
CCTCCTTTGTCTCCACCGCCGTCGGCCGGTCGGAAAGGTGGGTGTGTCCGGGTTAATTTTGGTAAGAACCCGGCGGTGAGGATTGAAGGGTTTGATTGCCGCCTCGACAG
AGAGAGGCGAAACCGTAGCATCCCTGCTCTGGCTTAG
mRNA sequenceShow/hide mRNA sequence
CTCTAGCTGTTTTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCTATTCTCTCTCTCCATTTTCGTTTTATTTTTCAATTAACAAATCTAATTCCCCTGTCTCTTTC
CCCCATCCTCTCTTCTTTATGCTCTTCTTATATTGCTCATAACTGACGCTCCTCCTCCTCCCCTTGTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGGCAAACAGA
AAACTAAAATTAGAAGAAGATGAATTGGGTTTGTGAAGAGATGCAAACCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCAAAACCCCGCCGTCTCGGTCTCATCA
ATGATACTTGCAACGATAACCCATTTAGACACCGGTTTGATTCAGATGCTCTGGATCTCCTCTTCTTAAAGGGTGGTTGTGGTTTGGAGAATTTTAACAGTAGTAATACA
CAATTAGCCTCGTCGCCGCCGTATTTTTGTGGATCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTGCCCCT
CTTTTCGCCGGCGGCTTCTCCTCCTTTGTCTCCACCGCCGTCGGCCGGTCGGAAAGGTGGGTGTGTCCGGGTTAATTTTGGTAAGAACCCGGCGGTGAGGATTGAAGGGT
TTGATTGCCGCCTCGACAGAGAGAGGCGAAACCGTAGCATCCCTGCTCTGGCTTAGAAACCCTATCCAAGCCGAGCCGGTTGAGCAATGATGATGAAGAAAACAAACACA
TGGATTTTAATTTTTTTTCCCACATTCAAAATTTAAATATTAAAGTAAAATTTTGAAAGAAAAGAAAAAACCTTTTTGACCAAAAGACCATTATTGTAAATAACTTGAAA
AGGAAATCCAAGTAAATATTATGTCAAAAGAAAAGAGGGCCTTGTTAGGTTTCTTTCTCTTCATGTTTGAGAGTCCTTATTTGACCAGATTGAAGAATAAGAGGGAGAGG
GAGATACTTCTTCTCTATTTTGTAATATATTTAAGTTTTTTTTTTTTCTTTAGTAGTGTCCAAGATTGTTTCTTAGGGGCAAACATTTTGTTGCAGCTTAAGAATGAGAA
AACATGTACAAATTGAAGCTGCATAAATTCAATATTAATCATGTAAATTTTTAAATGTTATATATACACTTTTCCCAATCTTTTTTGGGATATTTT
Protein sequenceShow/hide protein sequence
MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAAS
PPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA