; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G14070 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G14070
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCold shock protein 2-like
Genome locationChr5:14299702..14301046
RNA-Seq ExpressionCSPI05G14070
SyntenyCSPI05G14070
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR002059 - Cold-shock protein, DNA-binding
IPR011129 - Cold shock domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR019844 - Cold-shock (CSD) domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51220.2 hypothetical protein Csa_008318 [Cucumis sativus]1.5e-9298.87Show/hide
Query:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGGRGFG
        +RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGGRGFG
Subjt:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGGRGFG

Query:  RGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGRWNEGP+GGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
Subjt:  RGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

XP_004140332.1 cold shock protein 2 [Cucumis sativus]4.1e-9599.45Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRGRWNEGP+GGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
Subjt:  RGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

XP_008465791.1 PREDICTED: cold shock protein 2-like [Cucumis melo]1.2e-8994.51Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAE+KRS+GTVRWFSAQKGFGFIAPDDA+DDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRGRWNEGPT-GGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRGRW +GP+ GGGRGGGECYNCGRMGHLARDCYRGNGGAP GRRY+GGRGYGGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  RGFGRGRWNEGPT-GGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

XP_022993723.1 cold shock protein 2-like [Cucurbita maxima]9.6e-7681.63Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--
        MAE+KRS+GTVRWFSAQKGFGFIAPDDATDDLFVHQTSI+SEGFRTLFDGQ VEF IDYD+DQRAKAVDVTV  RS+ YGGGRGG RGRGG YGRFGG  
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--

Query:  --GGRGFGRGRWN-EGPT------GGGRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
          GGRGFGRG    +GP+      GGGRGGGECYNCGRMGHLARDCYRGNGGAP     GR Y GGRGYGGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  --GGRGFGRGRWN-EGPT------GGGRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

XP_038906549.1 glycine-rich protein 2-like [Benincasa hispida]3.5e-7885.56Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAE+KRS+GTVRWFSAQKGFGFIAPDDA++DLFVHQTSIRSEGFRTLFDGQ VEFTIDYD+DQR+KAVDVTVI RST YGGGRGGGRGRGG+YGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGR-GRWNE-----GPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGR GR+ +     G  GGGRGGGECYNCGRMGHLARDCYRGNGGAP GR Y GGRGYGGG GG GCYNCGDTGH ARDCQNESK
Subjt:  RGFGR-GRWNE-----GPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

TrEMBL top hitse value%identityAlignment
A0A0A0KRF7 Uncharacterized protein2.0e-9599.45Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRGRWNEGP+GGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
Subjt:  RGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

A0A1S3CPN9 cold shock protein 2-like5.6e-9094.51Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAE+KRS+GTVRWFSAQKGFGFIAPDDA+DDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRGRWNEGPT-GGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRGRW +GP+ GGGRGGGECYNCGRMGHLARDCYRGNGGAP GRRY+GGRGYGGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  RGFGRGRWNEGPT-GGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

A0A5A7TX13 Cold shock protein 2-like5.6e-9094.51Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAE+KRS+GTVRWFSAQKGFGFIAPDDA+DDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRGRWNEGPT-GGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRGRW +GP+ GGGRGGGECYNCGRMGHLARDCYRGNGGAP GRRY+GGRGYGGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  RGFGRGRWNEGPT-GGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

A0A6J1FIQ9 cold shock protein 2-like1.5e-7480.81Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--
        MAE+KRS+GTVRWFSAQKGFGFIAPDDATDDLFVHQTSI+SEGFRTLFDGQ VEF IDYD+DQRAKAVDVTV  RS+ YGGGRGG RGRGG YGRFGG  
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--

Query:  --GGRGFGRGRWN-EGPT------GGGRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGY--GGGGGGRGCYNCGDTGHLARDCQNESK
          GGRGFGRG    +GP+      GGGRGGGECYNCGRMGHLARDCYRGNGGAP     GR Y GGRGY  GGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  --GGRGFGRGRWN-EGPT------GGGRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGY--GGGGGGRGCYNCGDTGHLARDCQNESK

A0A6J1K351 cold shock protein 2-like4.6e-7681.63Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--
        MAE+KRS+GTVRWFSAQKGFGFIAPDDATDDLFVHQTSI+SEGFRTLFDGQ VEF IDYD+DQRAKAVDVTV  RS+ YGGGRGG RGRGG YGRFGG  
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--

Query:  --GGRGFGRGRWN-EGPT------GGGRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
          GGRGFGRG    +GP+      GGGRGGGECYNCGRMGHLARDCYRGNGGAP     GR Y GGRGYGGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  --GGRGFGRGRWN-EGPT------GGGRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

SwissProt top hitse value%identityAlignment
O65639 Cold shock protein 14.0e-2444.81Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-------IDRSTRYGGGRGGGRGRG-GSYGRFG
        RSTG V WF+A KG+GFI PDD + +LFVHQ+SI SEG+R+L  G  VEF I    D + KAV+VT         + ++R  G R GG G G  + G  G
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-------IDRSTRYGGGRGGGRGRG-GSYGRFG

Query:  GGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES
           +  G G    G     RGG  CYNCG  GH ARDC     G   G            GG  GCY CGD GH+ARDC  +S
Subjt:  GGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES

P27484 Glycine-rich protein 21.3e-3550Show/hide
Query:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVID----RSTRYGGGRGGGR-------------
        +R+ GTV+WFS QKGFGFI PDD  +DLFVHQ+ IRSEGFR+L +G+TVEF ++   D R KAVDVT  D    +  R GGG GGGR             
Subjt:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVID----RSTRYGGGRGGGR-------------

Query:  --GRGGSYG------------------RFGGGGRGFGRGRWNEGPTGGGRGGGE-CYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNC
          GRGGS G                  R+GGGG G+G G    G  GGG GGG  C+ CG  GH ARDC +  GG   G R+ GG   GGGGGG GCY C
Subjt:  --GRGGSYG------------------RFGGGGRGFGRGRWNEGPTGGGRGGGE-CYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNC

Query:  GDTGHLARDC
        G+ GH AR+C
Subjt:  GDTGHLARDC

Q38896 Cold shock domain-containing protein 48.5e-3551.1Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYG--------GGRGGGRGRGGSYGRFG
        R  GTV+WF  QKGFGFI P D  DDLFVHQ+SIRSEGFR+L   ++VEF ++ D   R KA++V+  D +   G        GGRGG  G GG  G  G
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYG--------GGRGGGRGRGGSYGRFG

Query:  GGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNG---GAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDC
        GG  G G G    G  GGG G   C+ CG  GH+AR+C +G G   G   G RY  G G GGGGGG  CY+CG++GH ARDC
Subjt:  GGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNG---GAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDC

Q41188 Cold shock protein 22.0e-3951.26Show/hide
Query:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRST--------------RYGGGRGGGRGRG
        +R  G+V+WF  QKGFGFI PDD  DDLFVHQ+SIRSEGFR+L   + VEF ++ D + R KA+DV+  D +                +GGGRGGGRG G
Subjt:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRST--------------RYGGGRGGGRGRG

Query:  GSYGRFGGGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGG-APSGRRYDGGRGYGGGGGGRG------------CYNCGDTGHLARDC
        G Y   GGGG G+G      G  GGGRGG +CY CG  GH+ARDC  G GG    G  Y GG GYGGGGGG G            CY+CG++GH ARDC
Subjt:  GSYGRFGGGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGG-APSGRRYDGGRGYGGGGGGRG------------CYNCGDTGHLARDC

Q94C69 Cold shock domain-containing protein 35.5e-2645.74Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-----IDRSTRYGGGRGGGRGRGGSYGRF----
        RS G V WFS  KG+GFI PDD  ++LFVHQ+SI S+GFR+L  G++VE+ I    D + KA++VT      +++      G GG     G  G      
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-----IDRSTRYGGGRGGGRGRGGSYGRF----

Query:  --GGGGRGFGRGRWNEGPTGGGRGG--GECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES
          G GG+ FG G       GG R G  GECY CG +GH ARDC R +GG  SG         GGGGGGR CY+CG+ GHLA+DC+  S
Subjt:  --GGGGRGFGRGRWNEGPTGGGRGG--GECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES

Arabidopsis top hitse value%identityAlignment
AT2G17870.1 cold shock domain protein 33.9e-2745.74Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-----IDRSTRYGGGRGGGRGRGGSYGRF----
        RS G V WFS  KG+GFI PDD  ++LFVHQ+SI S+GFR+L  G++VE+ I    D + KA++VT      +++      G GG     G  G      
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-----IDRSTRYGGGRGGGRGRGGSYGRF----

Query:  --GGGGRGFGRGRWNEGPTGGGRGG--GECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES
          G GG+ FG G       GG R G  GECY CG +GH ARDC R +GG  SG         GGGGGGR CY+CG+ GHLA+DC+  S
Subjt:  --GGGGRGFGRGRWNEGPTGGGRGG--GECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES

AT2G21060.1 glycine-rich protein 2B6.1e-3651.1Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYG--------GGRGGGRGRGGSYGRFG
        R  GTV+WF  QKGFGFI P D  DDLFVHQ+SIRSEGFR+L   ++VEF ++ D   R KA++V+  D +   G        GGRGG  G GG  G  G
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYG--------GGRGGGRGRGGSYGRFG

Query:  GGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNG---GAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDC
        GG  G G G    G  GGG G   C+ CG  GH+AR+C +G G   G   G RY  G G GGGGGG  CY+CG++GH ARDC
Subjt:  GGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNG---GAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDC

AT4G36020.1 cold shock domain protein 12.8e-2544.81Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-------IDRSTRYGGGRGGGRGRG-GSYGRFG
        RSTG V WF+A KG+GFI PDD + +LFVHQ+SI SEG+R+L  G  VEF I    D + KAV+VT         + ++R  G R GG G G  + G  G
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-------IDRSTRYGGGRGGGRGRG-GSYGRFG

Query:  GGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES
           +  G G    G     RGG  CYNCG  GH ARDC     G   G            GG  GCY CGD GH+ARDC  +S
Subjt:  GGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES

AT4G38680.1 glycine rich protein 21.4e-4051.26Show/hide
Query:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRST--------------RYGGGRGGGRGRG
        +R  G+V+WF  QKGFGFI PDD  DDLFVHQ+SIRSEGFR+L   + VEF ++ D + R KA+DV+  D +                +GGGRGGGRG G
Subjt:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRST--------------RYGGGRGGGRGRG

Query:  GSYGRFGGGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGG-APSGRRYDGGRGYGGGGGGRG------------CYNCGDTGHLARDC
        G Y   GGGG G+G      G  GGGRGG +CY CG  GH+ARDC  G GG    G  Y GG GYGGGGGG G            CY+CG++GH ARDC
Subjt:  GSYGRFGGGGRGFGRGRWNEGPTGGGRGGGECYNCGRMGHLARDCYRGNGG-APSGRRYDGGRGYGGGGGGRG------------CYNCGDTGHLARDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGCTGAAGAGATCGACCGGTACTGTAAGGTGGTTTAGTGCACAGAAGGGGTTTGGCTTCATAGCTCCAGATGATGCTACCGATGATCTTTTCGTCCACCAAAC
CTCCATTCGTTCAGAAGGATTCCGGACTCTTTTCGATGGTCAAACTGTTGAGTTTACCATCGATTATGATCAAGATCAACGCGCCAAGGCCGTCGACGTCACTGTAATTG
ATAGATCTACCAGATATGGAGGAGGCCGCGGGGGTGGGAGAGGTAGAGGTGGTTCTTATGGAAGATTCGGTGGTGGTGGACGTGGTTTTGGCAGAGGAAGATGGAACGAA
GGTCCAACCGGTGGTGGTCGTGGCGGTGGGGAGTGCTACAATTGTGGCCGGATGGGTCATTTGGCGAGGGATTGTTACAGGGGTAATGGCGGTGCTCCTTCCGGCCGTAG
ATACGACGGTGGTCGAGGTTATGGTGGAGGTGGAGGCGGCAGAGGTTGTTATAATTGTGGAGATACAGGACATTTGGCTAGGGATTGTCAAAACGAAAGCAAATGA
mRNA sequenceShow/hide mRNA sequence
CTTTTCCCCCGAATCTCTCTATCCGAGAGACATCCACTTTCGAAAAGTGAATCAATACTCAAATAAAGGGGAGGAAAAATCAATTGTCCGCCATTGGTTCCTTCTGTGAA
TGACATGCAGCTTATTCATCTAGATATACATTGCTACAAGCTTTTCAATTGTCCTTTCTTTCCCTTTTCTTTCTTTTACACTTTTTCCTTTTCATGGCTGAGCTGAAGAG
ATCGACCGGTACTGTAAGGTGGTTTAGTGCACAGAAGGGGTTTGGCTTCATAGCTCCAGATGATGCTACCGATGATCTTTTCGTCCACCAAACCTCCATTCGTTCAGAAG
GATTCCGGACTCTTTTCGATGGTCAAACTGTTGAGTTTACCATCGATTATGATCAAGATCAACGCGCCAAGGCCGTCGACGTCACTGTAATTGATAGATCTACCAGATAT
GGAGGAGGCCGCGGGGGTGGGAGAGGTAGAGGTGGTTCTTATGGAAGATTCGGTGGTGGTGGACGTGGTTTTGGCAGAGGAAGATGGAACGAAGGTCCAACCGGTGGTGG
TCGTGGCGGTGGGGAGTGCTACAATTGTGGCCGGATGGGTCATTTGGCGAGGGATTGTTACAGGGGTAATGGCGGTGCTCCTTCCGGCCGTAGATACGACGGTGGTCGAG
GTTATGGTGGAGGTGGAGGCGGCAGAGGTTGTTATAATTGTGGAGATACAGGACATTTGGCTAGGGATTGTCAAAACGAAAGCAAATGAAGAATGTTGGTTTTCCTTTAA
GCGGTACACATTATACTTTTTCTGAAAATTATTTTGGTTGGGCTGTTAATTTTTTTATGCGAAATCTGGGATTTTTTAGTGTGTCAGTGACTTCAAGTCTGCAATTGAGG
GAACGAGGATCTGGTGGCAATAAATCTTAAGGCTTCAGTTCGTCTATATTTCTCCTTTTGGGTCTTCCATAATTTGATGTTTATAATTAGATGATGAAACCAATTGTTTG
TATATGCTATACCTTTCTGGCATTTCTAATTCATTCTTTCTTTGCTTGTTTTATAGAATCATAATATGATATTTGTAATCTGTCAAAGGTATACGTTCATACCATTTTTT
ATTTCTTGTATACGTTTCACTTTTGTCTATTACTGTAATGGTTGTATTTTTTCGCCCCCATTATTGATTTCTTGGTGCTTTACTGGGATTCTTTGCTTCGAAACTTCAAT
CATTGGTGTTGAATTGGCAATGGAAGTAATTGTCCTGCACTATGTACTATATTTTTGCCTGTGTTTTCCCCGGAATCTGAATGAAACCAGAGCTCTTAATAATACTTTAG
ATATCTTTGAAGTTTCTCACAGAGG
Protein sequenceShow/hide protein sequence
MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGGRGFGRGRWNE
GPTGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK