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CSPI05G14110 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G14110
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr5:14338918..14339544
RNA-Seq ExpressionCSPI05G14110
SyntenyCSPI05G14110
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025314 - Domain of unknown function DUF4219


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022931810.1 uncharacterized protein LOC111438099 [Cucurbita moschata]5.4e-9178.47Show/hide
Query:  MANL-LANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFN
        MANL + NG  EGQSTSRPPYFDG+NY  WKARMKIYLQS+DY LWL V+ GPY+P+K V+N++ PKLE E+DE++MKKCS NA AINCLYCALS DEFN
Subjt:  MANL-LANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFN

Query:  RISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLT
        R+ MCSSA EIW TLE+THEGTNQVKE+KISM VHNYELFKM+ NE I DMFTRFTNI+NALK LGKVY+TSENVRKILRSLPK+WEAKVTAIQEAKDLT
Subjt:  RISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLT

Query:  KHPLEELIG
        K PL+EL+G
Subjt:  KHPLEELIG

XP_022971787.1 uncharacterized protein LOC111470465, partial [Cucurbita maxima]2.1e-9077.99Show/hide
Query:  MANL-LANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFN
        MANL + NG  EGQSTSRPPYFDG+NY  WKARMKIYLQS+D+ LWL V+ GPY+P+K V+N++ PKLE E+DE++MKKCS NA AINCLYCALS DEFN
Subjt:  MANL-LANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFN

Query:  RISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLT
        R+ MCSSA EIW TLE+THEGTNQVKE+KISM VHNYELFKM+ NE I DMFTRFTNI+NALK LGKVY+TSENVRKILRSLPK+WEAKVTAIQEAKDLT
Subjt:  RISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLT

Query:  KHPLEELIG
        K PL+EL+G
Subjt:  KHPLEELIG

XP_031739764.1 uncharacterized protein LOC116403291 [Cucumis sativus]9.0e-9499.43Show/hide
Query:  MKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNRISMCSSAQEIWNTLEITHEGTNQVKESKISMF
        MKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNRISMCSSAQEIWNTLEITHEGTNQVKESKISMF
Subjt:  MKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNRISMCSSAQEIWNTLEITHEGTNQVKESKISMF

Query:  VHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTKHPLEELIG
        VHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTK PLEELIG
Subjt:  VHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTKHPLEELIG

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]3.5e-11499.52Show/hide
Query:  MANLLANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNR
        MANLLANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNR
Subjt:  MANLLANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNR

Query:  ISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTK
        ISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTK
Subjt:  ISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTK

Query:  HPLEELIG
         PLEELIG
Subjt:  HPLEELIG

XP_038895919.1 uncharacterized protein LOC120084093 [Benincasa hispida]1.1e-8071.63Show/hide
Query:  MANLLANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNR
        MA    NG  EGQST+RPP FDG+NYA+WK RM+IYL SIDYNLW IV  GP +P K VDN D PK E++ ++ + KK S NAKA+NCL+C L  +EFN+
Subjt:  MANLLANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNR

Query:  ISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTK
        IS C+SA+EIW+ L++THEGTNQVKESKISM VHNY+LFKMDANETI++MFTRFTNI+N LKGLGK YTTSENVRKILRSLPK+WEAKVT IQEAKDL+K
Subjt:  ISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTK

Query:  HPLEELIG
         PLEEL+G
Subjt:  HPLEELIG

TrEMBL top hitse value%identityAlignment
A0A1Q3B3K5 DUF4219 domain-containing protein/UBN2 domain-containing protein7.2e-6559.13Show/hide
Query:  MANLLANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNR
        MAN L  G+ EG S +RPP+FDG NY++WK RM I+LQS+DY LW I+  GP +P + +D V +PK E EY++N+ +    N+KA + L+CA+  +EFNR
Subjt:  MANLLANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNR

Query:  ISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTK
        IS C SA+E+W+ LE+T+EGTNQVKESKISM VH YELF M  +E I+DMFTRFT I N+LK LGK Y+  E VRKILR LPK W  KVTAI+EAKDL+ 
Subjt:  ISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTK

Query:  HPLEELIG
         PLE+L+G
Subjt:  HPLEELIG

A0A1Q3D8T7 Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein1.4e-6357.79Show/hide
Query:  VEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNRISMCSSAQE
        +EG S +RPP+FDG+NY++WK RM I+LQS+DY LW I+  GP +P + ++ V +PK E EY+ N+ +    N+KA + L+CA+  +EFNRIS C SA+E
Subjt:  VEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNRISMCSSAQE

Query:  IWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTKHPLEELIG
        +W+ LE+T+EGTNQVKESKISM VH YELF M  +E I+DMFTRFT I+N+LK LGK Y+  E VRK+LR LP++W  KVTAI+EAKDL+  PLE+L+G
Subjt:  IWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTKHPLEELIG

A0A2N9ECJ4 CCHC-type domain-containing protein1.8e-6358.17Show/hide
Query:  MANLLANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNR
        MAN     ++EGQST RPP F GS+Y YWK RM +Y++  DY++W I+A GP++P K V+     KLE E++E ++K    N KA++ LYCAL   E+NR
Subjt:  MANLLANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNR

Query:  ISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTK
        +S C SA+EIW+ LE+T+EGTNQVKESK++M VH YELF M  +E I++M TRFTNI+N LK LGK+YT  ENVRKILRSLPK WEAK+TAI EA+DL  
Subjt:  ISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTK

Query:  HPLEELIG
          LEEL G
Subjt:  HPLEELIG

A0A6J1F0H1 uncharacterized protein LOC1114380992.6e-9178.47Show/hide
Query:  MANL-LANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFN
        MANL + NG  EGQSTSRPPYFDG+NY  WKARMKIYLQS+DY LWL V+ GPY+P+K V+N++ PKLE E+DE++MKKCS NA AINCLYCALS DEFN
Subjt:  MANL-LANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFN

Query:  RISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLT
        R+ MCSSA EIW TLE+THEGTNQVKE+KISM VHNYELFKM+ NE I DMFTRFTNI+NALK LGKVY+TSENVRKILRSLPK+WEAKVTAIQEAKDLT
Subjt:  RISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLT

Query:  KHPLEELIG
        K PL+EL+G
Subjt:  KHPLEELIG

A0A6J1I2X4 uncharacterized protein LOC1114704651.0e-9077.99Show/hide
Query:  MANL-LANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFN
        MANL + NG  EGQSTSRPPYFDG+NY  WKARMKIYLQS+D+ LWL V+ GPY+P+K V+N++ PKLE E+DE++MKKCS NA AINCLYCALS DEFN
Subjt:  MANL-LANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFN

Query:  RISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLT
        R+ MCSSA EIW TLE+THEGTNQVKE+KISM VHNYELFKM+ NE I DMFTRFTNI+NALK LGKVY+TSENVRKILRSLPK+WEAKVTAIQEAKDLT
Subjt:  RISMCSSAQEIWNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLT

Query:  KHPLEELIG
        K PL+EL+G
Subjt:  KHPLEELIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACCTATTGGCAAATGGTATTGTTGAAGGTCAATCTACTTCTAGACCTCCTTATTTTGATGGTTCAAATTATGCATATTGGAAAGCTAGAATGAAAATTTATTT
GCAATCTATTGACTATAATTTGTGGTTAATTGTTGCTAAAGGTCCTTATGTACCCATGAAAAATGTTGATAATGTTGATACGCCTAAATTAGAAGAAGAGTATGATGAAA
ATGAAATGAAAAAGTGTTCATTTAATGCTAAGGCTATTAATTGTTTGTATTGTGCCTTGAGTAAAGATGAATTTAATAGAATATCCATGTGTTCTTCCGCTCAAGAAATT
TGGAATACTCTTGAAATTACTCATGAAGGAACAAATCAAGTTAAAGAGTCTAAAATTAGCATGTTTGTTCATAATTATGAATTGTTTAAGATGGATGCTAATGAGACTAT
CACCGATATGTTTACTAGATTTACTAACATCATAAATGCTTTGAAGGGTCTTGGTAAAGTTTATACAACTTCCGAAAATGTTAGAAAAATTCTAAGGTCTCTACCTAAGA
CTTGGGAAGCTAAGGTAACGGCGATTCAAGAAGCAAAGGATCTCACCAAACATCCACTAGAGGAGCTTATTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACCTATTGGCAAATGGTATTGTTGAAGGTCAATCTACTTCTAGACCTCCTTATTTTGATGGTTCAAATTATGCATATTGGAAAGCTAGAATGAAAATTTATTT
GCAATCTATTGACTATAATTTGTGGTTAATTGTTGCTAAAGGTCCTTATGTACCCATGAAAAATGTTGATAATGTTGATACGCCTAAATTAGAAGAAGAGTATGATGAAA
ATGAAATGAAAAAGTGTTCATTTAATGCTAAGGCTATTAATTGTTTGTATTGTGCCTTGAGTAAAGATGAATTTAATAGAATATCCATGTGTTCTTCCGCTCAAGAAATT
TGGAATACTCTTGAAATTACTCATGAAGGAACAAATCAAGTTAAAGAGTCTAAAATTAGCATGTTTGTTCATAATTATGAATTGTTTAAGATGGATGCTAATGAGACTAT
CACCGATATGTTTACTAGATTTACTAACATCATAAATGCTTTGAAGGGTCTTGGTAAAGTTTATACAACTTCCGAAAATGTTAGAAAAATTCTAAGGTCTCTACCTAAGA
CTTGGGAAGCTAAGGTAACGGCGATTCAAGAAGCAAAGGATCTCACCAAACATCCACTAGAGGAGCTTATTGGCTGA
Protein sequenceShow/hide protein sequence
MANLLANGIVEGQSTSRPPYFDGSNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEEEYDENEMKKCSFNAKAINCLYCALSKDEFNRISMCSSAQEI
WNTLEITHEGTNQVKESKISMFVHNYELFKMDANETITDMFTRFTNIINALKGLGKVYTTSENVRKILRSLPKTWEAKVTAIQEAKDLTKHPLEELIG