; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G14120 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G14120
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationChr5:14346987..14350421
RNA-Seq ExpressionCSPI05G14120
SyntenyCSPI05G14120
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032948.1 zinc finger BED domain-containing protein RICESLEEPER 2 [Cucumis melo var. makuwa]2.0e-7286.06Show/hide
Query:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
        MRLYN YKSQ+D  AFRNDLSGQ VVCEQVESSDSL++LSS TT+ETDA CRVLSRYKR+RQ QNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLN  K
Subjt:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK

Query:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP
        Y ILSKIAQD F VLVSTV S+ AFST GRILDSFRSS+SPKTVE LICTQNWIRGKTTLLDLCP
Subjt:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP

KAA0058814.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.6e-7285.45Show/hide
Query:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
        MRLYN YK+Q+D  AFRNDLSGQ VVCEQVESSDSL++LSS TT+ETDA CRVLSRYKR+RQ QNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLN  K
Subjt:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK

Query:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP
        Y ILSKIAQD F V VSTVAS+ AFST GRILDSFRSS+SPKTVEAL+CTQNWIRGKTTLLDLCP
Subjt:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP

KAA0062374.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]6.9e-7386.67Show/hide
Query:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
        M LYN YKSQ+D  AFRNDLSGQ VVCEQVESSDSL++LSS TT+ETDA CRVLSRYKR+RQ QNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLN  K
Subjt:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK

Query:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP
        Y ILSKIAQD FVV VSTVAS+ AFST GRILDSFRSS+SPKTVEALICTQNWIRGKTTLLDLCP
Subjt:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP

KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]3.4e-7286.67Show/hide
Query:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
        MRLYN YKSQ  D AFRNDLSGQ VVCEQVESSDSL++LSS TT+ETDA CRVLSRYKR+RQ QNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLN  K
Subjt:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK

Query:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP
        Y ILSKIAQD F V VSTVAS+ AFST GRILDSFRSS+SPKTVEALICTQNWIRGKTTLLDLCP
Subjt:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP

KAE8648396.1 hypothetical protein Csa_008568 [Cucumis sativus]1.2e-8093.94Show/hide
Query:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
        MRLYNFYKSQVDDS FRNDL GQDVVCEQVESSD+LRLLSSR TVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
Subjt:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK

Query:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP
        YRILSKIA DSFVVLVST ASK AFST GRILDSFRSS+SPKTVEALICTQNWI GKTTLLDLCP
Subjt:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP

TrEMBL top hitse value%identityAlignment
A0A5A7SQX7 Zinc finger BED domain-containing protein RICESLEEPER 29.7e-7386.06Show/hide
Query:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
        MRLYN YKSQ+D  AFRNDLSGQ VVCEQVESSDSL++LSS TT+ETDA CRVLSRYKR+RQ QNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLN  K
Subjt:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK

Query:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP
        Y ILSKIAQD F VLVSTV S+ AFST GRILDSFRSS+SPKTVE LICTQNWIRGKTTLLDLCP
Subjt:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP

A0A5A7UUF4 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.3e-7285.45Show/hide
Query:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
        MRLYN YK+Q+D  AFRNDLSGQ VVCEQVESSDSL++LSS TT+ETDA CRVLSRYKR+RQ QNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLN  K
Subjt:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK

Query:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP
        Y ILSKIAQD F V VSTVAS+ AFST GRILDSFRSS+SPKTVEAL+CTQNWIRGKTTLLDLCP
Subjt:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP

A0A5A7V549 Zinc finger BED domain-containing protein RICESLEEPER 2-like3.3e-7386.67Show/hide
Query:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
        M LYN YKSQ+D  AFRNDLSGQ VVCEQVESSDSL++LSS TT+ETDA CRVLSRYKR+RQ QNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLN  K
Subjt:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK

Query:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP
        Y ILSKIAQD FVV VSTVAS+ AFST GRILDSFRSS+SPKTVEALICTQNWIRGKTTLLDLCP
Subjt:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP

A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.7e-7286.67Show/hide
Query:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
        MRLYN YKSQ  D AFRNDLSGQ VVCEQVESSDSL++LSS TT+ETDA CRVLSRYKR+RQ QNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLN  K
Subjt:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK

Query:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP
        Y ILSKIAQD F V VSTVAS+ AFST GRILDSFRSS+SPKTVEALICTQNWIRGKTTLLDLCP
Subjt:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP

A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.7e-7286.67Show/hide
Query:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK
        MRLYN YKSQ  D AFRNDLSGQ VVCEQVESSDSL++LSS TT+ETDA CRVLSRYKR+RQ QNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLN  K
Subjt:  MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAK

Query:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP
        Y ILSKIAQD F V VSTVAS+ AFST GRILDSFRSS+SPKTVEALICTQNWIRGKTTLLDLCP
Subjt:  YRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 13.8e-1336.08Show/hide
Query:  QVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASK---FAFSTEGRILDSFRSSISPKTVEALICTQNWIR
        ++  +   ++++++YL +       +FD+L WWKLN  KY  LSK+A+D   + +S V+S    F+  T  R+LD +RSS  P+ VEAL+C ++W++
Subjt:  QVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASK---FAFSTEGRILDSFRSSISPKTVEALICTQNWIR

P03010 Putative AC9 transposase8.6e-1846.43Show/hide
Query:  NDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWI
        N++D+Y+S+P  + + QFD+L+WW+   A+Y IL++IA+D   + VSTVAS+ AFS  GR++D +R+ +  + VEALICT++W+
Subjt:  NDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWI

P08770 Putative AC transposase8.6e-1846.43Show/hide
Query:  NDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWI
        N++D+Y+S+P  + + QFD+L+WW+   A+Y IL++IA+D   + VSTVAS+ AFS  GR++D +R+ +  + VEALICT++W+
Subjt:  NDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWI

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 28.4e-1334.02Show/hide
Query:  QVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASK---FAFSTEGRILDSFRSSISPKTVEALICTQNWIR
        ++  +   ++++++YL +       +FD+L WWKLN  K+  LS++A+D   + +S V+S    F+  T  R+LD +RSS+ P+ VEAL+C ++W++
Subjt:  QVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASK---FAFSTEGRILDSFRSSISPKTVEALICTQNWIR

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER2.0e-1441.86Show/hide
Query:  LRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWI
        L++++D+YL +       +FDVL WWK N  KY  LSK+A+D   + VS  A  + F  E R +D +++S+ P+TVEALIC + W+
Subjt:  LRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWI

Arabidopsis top hitse value%identityAlignment
AT1G18560.1 BED zinc finger ;hAT family dimerisation domain2.2e-0828.04Show/hide
Query:  KRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGK
        +RKR+   +  + +++ +YLS+    +  Q DVL WWK+N  +Y  LS +A+D   V  ++ A +  F  +G  +D  +  +   + +++IC ++WI   
Subjt:  KRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGK

Query:  TTLLDLC
          L   C
Subjt:  TTLLDLC

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain1.4e-1541.86Show/hide
Query:  LRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWI
        L++++D+YL +       +FDVL WWK N  KY  LSK+A+D   + VS  A  + F  E R +D +++S+ P+TVEALIC + W+
Subjt:  LRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQDSFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATTGTACAATTTTTACAAATCTCAAGTTGATGACTCTGCCTTTCGCAATGATTTGAGTGGTCAAGATGTTGTTTGTGAACAAGTAGAATCAAGTGATAGTTTGAG
ACTATTGAGTTCGAGAACTACAGTGGAAACTGACGCGTGTTGTAGAGTATTATCACGCTACAAGAGAAAAAGACAAGTACAAAATACTTTAGAATTGAGGAATGATGTTG
ATCGGTATTTATCTGACCCTTGTGAGGAGTTAAATGATCAGTTTGATGTTCTAACTTGGTGGAAATTGAATGGGGCTAAATACCGAATTCTATCAAAAATTGCTCAAGAT
AGTTTTGTCGTTCTGGTGTCTACTGTGGCTTCTAAATTTGCATTCAGTACTGAAGGAAGGATTTTGGATTCTTTTAGGAGTTCCATATCACCTAAAACAGTGGAAGCTTT
GATTTGTACACAAAATTGGATTCGTGGCAAAACAACCTTATTGGATCTTTGTCCATAG
mRNA sequenceShow/hide mRNA sequence
GGTTAAAGCTCTTGTAAGATTGAAGCTTATTTGATGCGATTGTACAATTTTTACAAATCTCAAGTTGATGACTCTGCCTTTCGCAATGATTTGAGTGGTCAAGATGTTGT
TTGTGAACAAGTAGAATCAAGTGATAGTTTGAGACTATTGAGTTCGAGAACTACAGTGGAAACTGACGCGTGTTGTAGAGTATTATCACGCTACAAGAGAAAAAGACAAG
TACAAAATACTTTAGAATTGAGGAATGATGTTGATCGGTATTTATCTGACCCTTGTGAGGAGTTAAATGATCAGTTTGATGTTCTAACTTGGTGGAAATTGAATGGGGCT
AAATACCGAATTCTATCAAAAATTGCTCAAGATAGTTTTGTCGTTCTGGTGTCTACTGTGGCTTCTAAATTTGCATTCAGTACTGAAGGAAGGATTTTGGATTCTTTTAG
GAGTTCCATATCACCTAAAACAGTGGAAGCTTTGATTTGTACACAAAATTGGATTCGTGGCAAAACAACCTTATTGGATCTTTGTCCATAGCCCAGAGGAATGGAAATTT
GTGAAAAAATTGAGAACGATAGTATCAAGTCTTCCGTCACGTCACAAACATGATCTATGGGTTGGGAAGTTTTATGGAATTAGGTGTTAAGGCCAAGTAGAGAAGAAGTG
AAGGG
Protein sequenceShow/hide protein sequence
MRLYNFYKSQVDDSAFRNDLSGQDVVCEQVESSDSLRLLSSRTTVETDACCRVLSRYKRKRQVQNTLELRNDVDRYLSDPCEELNDQFDVLTWWKLNGAKYRILSKIAQD
SFVVLVSTVASKFAFSTEGRILDSFRSSISPKTVEALICTQNWIRGKTTLLDLCP