| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 0.0e+00 | 88.5 | Show/hide |
Query: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
MTKRSFTGKGLRAK PLEL+HSDLCGPMNVKARGGYEYFISFIDD+SRYGH+YL+HHKS S EKFKEYKAEVENE+GKTIK LRSDRGGEYMD +F+DYL
Subjt: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
IE GIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMS++Q+ DSFWGYALETA +ILNNVPSKSV ETPYELWKGRK SLR+FRIWGCPAHVLVQNPKKL
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
Query: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQP
E RSKLC F+GYPKESRGGLFY PQENK+FVSTNATFLEEDH R+HQPRSK+VLKE+ K+A DKPSSSTKVVDK S QSH SQ+LR PRRSGRVVHQP
Subjt: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQP
Query: DRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVD
+RYLGL+ETQ++IPDDG+EDPLTYKQAM DVDRDQWIKAM+LEMESMYFNSVWTLVD P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVD
Subjt: DRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVD
Query: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEP
YEETFSPVAMLKSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI QDQEQKVCKL+KSIYGLKQASRSWNIRFDTAIKSYGFEQN+DEP
Subjt: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEP
Query: CVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHL
CVYKK+VNS++AFL+LYVDDILLIGNDV YLTD+KKWL QFQMKDLG+AQY+LGIQIVRNRKNKTLAMSQASYIDK+LSRYKMQNSKKG LP+R+GIHL
Subjt: CVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHL
Query: SKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKDARK
SKEQCPKTPQEVEDMRNIPY+SAVGSLMYAMLCTRPDICYSVG+VSRYQSNPGRDHWTAVKNILKYLRRT++YML+YG KDLILTGYTDSDFQ+DKDARK
Subjt: SKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKDARK
Query: STSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
STSGSVFTLNGGAVVWRS+KQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAV NS+ R SH +G+
Subjt: STSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 83.75 | Show/hide |
Query: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
MTKR FTGKG RAK PLELIHSDLCGPMNVKARGG+EYFISFIDDYSRYG++YL+ HKS +LEKFKEYK EVEN L K IKILRSDRGGEYMDLRF+DY+
Subjt: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV NPKKL
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
Query: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
E RS+LC F+GYPKE+RGGLF+DPQEN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR PRRSGRVV
Subjt: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
Query: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQRE
Subjt: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
Query: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKSYGF+QN+
Subjt: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
Query: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
DEPCVYKK+ +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+AQYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G
Subjt: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
Query: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
+HLSKEQ PKTPQEVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK +LKYLRRT+DYML+YG KDLILTGYTDSDFQTDKD
Subjt: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
Query: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
+RKSTSGSVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRKFL DLEVVPNM+LPITLYCDNSGAV NS+ R SH +G+
Subjt: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
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| KAA0033121.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 81.01 | Show/hide |
Query: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
MTKR FTGKG RAK PLELIHSDLCGPMNVKARGG+EYFISFIDDYSRYG++YL+ HKS +LEKFKEYK EVEN L K IKILRSDRGGEYMDLRF+DY+
Subjt: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
IE+GIQ QLSAP TPQQNGV ERRNRT+LDMVRSMMS++Q+ SFWGYA+ETA +ILNNV SKSVSETP+ELW+GRK SL HF+I GCPAHVLV NPKKL
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
Query: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
E RS+LC F+GYPKE+RGGLF+DPQ+N++ VSTNATFLEEDH+RDH+P++KLVL E S +D+ S++ V++T SGQSHPSQ LR PRRSGR+V
Subjt: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
Query: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
QP+RYLGL ETQVVIPDDG+EDPL+Y QAM DVD+DQW+KAMDLEMESMYFN +W LVD P VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQRE
Subjt: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
Query: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
GVDYEETFSPVAMLKSIRILLSIATFYDYEIW+MDV TAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKSYGFEQN+
Subjt: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
Query: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
DEPCVYKK+ + FLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+AQYVLGIQI+R+RKNKTLA+SQA+YIDKML RY MQNSKKGLLP+R+G
Subjt: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
Query: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
+HLSKEQCPKTPQEVEDMR IPYASAVGSLMY + CTR +ICY+V +VSRYQSN G DHWTAVK ILKYLRRT+DYML+YG KDLILTGYTDSDFQT+KD
Subjt: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
Query: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISH
+RKSTS SVFTLNGGA+VWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRKFL DLEVVPNM+LPITLYCDNSGAV NS+ R + H
Subjt: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISH
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 82.37 | Show/hide |
Query: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
MTKR FTGKG RAK PLELIHSDLCGPMNVKARG +EYFISFIDDYSRYG++YL+ HKS +LEKFKEYK EVEN L K IKI RSDRGGEYMDL F+DY+
Subjt: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV NPKKL
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
Query: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
E RS+LC F+GYPKE+RGGLF+DP+EN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR PRRSGRVV
Subjt: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
Query: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYT++E
Subjt: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
Query: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
GVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKSYGF+QN+
Subjt: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
Query: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
DEPCVYKK+ +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+ QYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G
Subjt: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
Query: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
+HLSKEQ PKTPQEVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK ILKYLRRT+DYML+YG KDLILTGYT+SDFQTDKD
Subjt: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
Query: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
+RKSTS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWL+KFL DLEVVPNM+LPITLYCDNSGAV NS+ R SH +G+
Subjt: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 83.75 | Show/hide |
Query: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
MTKR FTGKG RAK PLELIHSDLCGPMNVKARGG+EYFISFIDDYSRYG++YL+ HKS +LEKFKEYK EVEN L K IKILRSDRGGEYMDLRF+DY+
Subjt: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV NPKKL
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
Query: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
E RS+LC F+GYPKE+RGGLF+DPQEN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR PRRSGRVV
Subjt: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
Query: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQRE
Subjt: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
Query: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKSYGF+QN+
Subjt: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
Query: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
DEPCVYKK+ +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+AQYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G
Subjt: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
Query: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
+HLSKEQ PKTPQEVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK +LKYLRRT+DYML+YG KDLILTGYTDSDFQTDKD
Subjt: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
Query: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
+RKSTSGSVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRKFL DLEVVPNM+LPITLYCDNSGAV NS+ R SH +G+
Subjt: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7T2V9 Gag/pol protein | 0.0e+00 | 82.37 | Show/hide |
Query: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
MTKR FTGKG RAK PLELIHSDLCGPMNVKARG +EYFISFIDDYSRYG++YL+ HKS +LEKFKEYK EVEN L K IKI RSDRGGEYMDL F+DY+
Subjt: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV NPKKL
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
Query: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
E RS+LC F+GYPKE+RGGLF+DP+EN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR PRRSGRVV
Subjt: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
Query: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYT++E
Subjt: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
Query: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
GVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKSYGF+QN+
Subjt: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
Query: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
DEPCVYKK+ +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+ QYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G
Subjt: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
Query: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
+HLSKEQ PKTPQEVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK ILKYLRRT+DYML+YG KDLILTGYT+SDFQTDKD
Subjt: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
Query: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
+RKSTS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWL+KFL DLEVVPNM+LPITLYCDNSGAV NS+ R SH +G+
Subjt: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
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| A0A5A7TZD0 Gag/pol protein | 0.0e+00 | 83.75 | Show/hide |
Query: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
MTKR FTGKG RAK PLELIHSDLCGPMNVKARGG+EYFISFIDDYSRYG++YL+ HKS +LEKFKEYK EVEN L K IKILRSDRGGEYMDLRF+DY+
Subjt: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV NPKKL
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
Query: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
E RS+LC F+GYPKE+RGGLF+DPQEN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR PRRSGRVV
Subjt: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
Query: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQRE
Subjt: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
Query: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKSYGF+QN+
Subjt: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
Query: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
DEPCVYKK+ +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+AQYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G
Subjt: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
Query: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
+HLSKEQ PKTPQEVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK +LKYLRRT+DYML+YG KDLILTGYTDSDFQTDKD
Subjt: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
Query: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
+RKSTSGSVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRKFL DLEVVPNM+LPITLYCDNSGAV NS+ R SH +G+
Subjt: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
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| A0A5A7UYE8 Gag/pol protein | 0.0e+00 | 83.75 | Show/hide |
Query: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
MTKR FTGKG RAK PLELIHSDLCGPMNVKARGG+EYFISFIDDYSRYG++YL+ HKS +LEKFKEYK EVEN L K IKILRSDRGGEYMDLRF+DY+
Subjt: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV NPKKL
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
Query: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
E RS+LC F+GYPKE+RGGLF+DPQEN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR PRRSGRVV
Subjt: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
Query: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQRE
Subjt: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
Query: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKSYGF+QN+
Subjt: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
Query: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
DEPCVYKK+ +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+AQYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G
Subjt: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
Query: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
+HLSKEQ PKTPQEVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK +LKYLRRT+DYML+YG KDLILTGYTDSDFQTDKD
Subjt: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
Query: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
+RKSTSGSVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRKFL DLEVVPNM+LPITLYCDNSGAV NS+ R SH +G+
Subjt: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
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| A0A5D3CZY3 Gag/pol protein | 0.0e+00 | 81.01 | Show/hide |
Query: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
MTKR FTGKG RAK PLELIHSDLCGPMNVKARGG+EYFISFIDDYSRYG++YL+ HKS +LEKFKEYK EVEN L K IKILRSDRGGEYMDLRF+DY+
Subjt: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
IE+GIQ QLSAP TPQQNGV ERRNRT+LDMVRSMMS++Q+ SFWGYA+ETA +ILNNV SKSVSETP+ELW+GRK SL HF+I GCPAHVLV NPKKL
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
Query: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
E RS+LC F+GYPKE+RGGLF+DPQ+N++ VSTNATFLEEDH+RDH+P++KLVL E S +D+ S++ V++T SGQSHPSQ LR PRRSGR+V
Subjt: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVV
Query: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
QP+RYLGL ETQVVIPDDG+EDPL+Y QAM DVD+DQW+KAMDLEMESMYFN +W LVD P VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQRE
Subjt: HQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQRE
Query: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
GVDYEETFSPVAMLKSIRILLSIATFYDYEIW+MDV TAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKSYGFEQN+
Subjt: GVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNI
Query: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
DEPCVYKK+ + FLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+AQYVLGIQI+R+RKNKTLA+SQA+YIDKML RY MQNSKKGLLP+R+G
Subjt: DEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYG
Query: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
+HLSKEQCPKTPQEVEDMR IPYASAVGSLMY + CTR +ICY+V +VSRYQSN G DHWTAVK ILKYLRRT+DYML+YG KDLILTGYTDSDFQT+KD
Subjt: IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKD
Query: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISH
+RKSTS SVFTLNGGA+VWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRKFL DLEVVPNM+LPITLYCDNSGAV NS+ R + H
Subjt: ARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISH
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| E2GK51 Gag/pol protein (Fragment) | 0.0e+00 | 88.5 | Show/hide |
Query: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
MTKRSFTGKGLRAK PLEL+HSDLCGPMNVKARGGYEYFISFIDD+SRYGH+YL+HHKS S EKFKEYKAEVENE+GKTIK LRSDRGGEYMD +F+DYL
Subjt: MTKRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
IE GIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMS++Q+ DSFWGYALETA +ILNNVPSKSV ETPYELWKGRK SLR+FRIWGCPAHVLVQNPKKL
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKL
Query: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQP
E RSKLC F+GYPKESRGGLFY PQENK+FVSTNATFLEEDH R+HQPRSK+VLKE+ K+A DKPSSSTKVVDK S QSH SQ+LR PRRSGRVVHQP
Subjt: EHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQP
Query: DRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVD
+RYLGL+ETQ++IPDDG+EDPLTYKQAM DVDRDQWIKAM+LEMESMYFNSVWTLVD P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVD
Subjt: DRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVD
Query: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEP
YEETFSPVAMLKSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI QDQEQKVCKL+KSIYGLKQASRSWNIRFDTAIKSYGFEQN+DEP
Subjt: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEP
Query: CVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHL
CVYKK+VNS++AFL+LYVDDILLIGNDV YLTD+KKWL QFQMKDLG+AQY+LGIQIVRNRKNKTLAMSQASYIDK+LSRYKMQNSKKG LP+R+GIHL
Subjt: CVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHL
Query: SKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKDARK
SKEQCPKTPQEVEDMRNIPY+SAVGSLMYAMLCTRPDICYSVG+VSRYQSNPGRDHWTAVKNILKYLRRT++YML+YG KDLILTGYTDSDFQ+DKDARK
Subjt: SKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKDARK
Query: STSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
STSGSVFTLNGGAVVWRS+KQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAV NS+ R SH +G+
Subjt: STSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISHPKGQ
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 3.0e-116 | 30.51 | Show/hide |
Query: KGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPS
K PL ++HSD+CGP+ YF+ F+D ++ Y YLI +KS+ F+++ A+ E + L D G EY+ R + ++ GI L+ P
Subjt: KGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPS
Query: TPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSV---SETPYELWKGRKGSLRHFRIWGCPAHVLVQNPK-KLEHRSKLCFF
TPQ NGVSER RT+ + R+M+S +++ SFWG A+ TA Y++N +PS+++ S+TPYE+W +K L+H R++G +V ++N + K + +S F
Subjt: TPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSV---SETPYELWKGRKGSLRHFRIWGCPAHVLVQNPK-KLEHRSKLCFF
Query: IGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDK--PSSSTKVV------------------DKTRKSGQSHPS-----
+GY E G +D K V+ + E + + + + V + SK + +K P+ S K++ D ++ P+
Subjt: IGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDK--PSSSTKVV------------------DKTRKSGQSHPS-----
Query: ---------------QQLREPRRSGRVV------HQPDRYLG------------LIETQVVIPDDGIEDP---------------------LTYKQ----
Q L++ + S + + D +L ET + + GI++P ++Y +
Subjt: ---------------QQLREPRRSGRVV------HQPDRYLG------------LIETQVVIPDDGIEDP---------------------LTYKQ----
Query: ----------AMKDV-----------DRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETF
DV D+ W +A++ E+ + N+ WT+ +P + + +W++ K + G +KARLVA+G+TQ+ +DYEETF
Subjt: ----------AMKDV-----------DRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETF
Query: SPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVY--
+PVA + S R +LS+ Y+ ++ QMDVKTAFLNG L+E IYM P+G VCKL K+IYGLKQA+R W F+ A+K F + + C+Y
Subjt: SPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVY--
Query: -KKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLP----YRYGI
K +N I +++LYVDD+++ D+ + + K++L +F+M DL + ++ +GI+I + + +SQ++Y+ K+LS++ M+N P Y +
Subjt: -KKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLP----YRYGI
Query: HLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLI----LTGYTDSDFQT
S E C N P S +G LMY MLCTRPD+ +V ++SRY S + W +K +L+YL+ T D L++ K+L + GY DSD+
Subjt: HLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLI----LTGYTDSDFQT
Query: DKDARKSTSGSVFTL-NGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRN
+ RKST+G +F + + + W + +Q +A S+ EAEY+A EA +EA+WL+ LT + + + PI +Y DN G + + N
Subjt: DKDARKSTSGSVFTL-NGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRN
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.0e-178 | 41.69 | Show/hide |
Query: SFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENG
SF R L+L++SD+CGPM +++ GG +YF++FIDD SR +Y++ K + F+++ A VE E G+ +K LRSD GGEY F +Y +G
Subjt: SFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENG
Query: IQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCP--AHVLVQNPKKLE
I+ + + P TPQ NGV+ER NRT+++ VRSM+ +++ SFWG A++TA Y++N PS ++ E P +W ++ S H +++GC AHV + KL+
Subjt: IQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCP--AHVLVQNPKKLE
Query: HRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI------SKSAIDKPSSSTKVVDKTRKSGQ---------------
+S C FIGY E G +DP + K+ S + F E +R S+ V I S + P+S+ D+ + G+
Subjt: HRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI------SKSAIDKPSSSTKVVDKTRKSGQ---------------
Query: ----SHPSQ---QLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKR
HP+Q Q + RRS R + RY V+I DD +P + K+ + +++Q +KAM EMES+ N + LV+ P +P+ CKW++K
Subjt: ----SHPSQ---QLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKR
Query: KRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGL
K+D K+ +KARLV KG+ Q++G+D++E FSPV + SIR +LS+A D E+ Q+DVKTAFL+G+LEE IYM QPEGF ++ VCKL KS+YGL
Subjt: KRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGL
Query: KQASRSWNIRFDTAIKSYGFEQNIDEPCVY-KKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQA
KQA R W ++FD+ +KS + + +PCVY K+ + L+LYVDD+L++G D G + +K L+ F MKDLG AQ +LG++IVR R ++ L +SQ
Subjt: KQASRSWNIRFDTAIKSYGFEQNIDEPCVY-KKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQA
Query: SYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKD
YI+++L R+ M+N+K P + LSK+ CP T +E +M +PY+SAVGSLMYAM+CTRPDI ++VG+VSR+ NPG++HW AVK IL+YLR T
Subjt: SYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKD
Query: YMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGA
L +G D IL GYTD+D D D RKS++G +FT +GGA+ W+S Q C+A ST EAEY+AA E KE +WL++FL +L + ++ +YCD+ A
Subjt: YMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGA
Query: VENSRN
++ S+N
Subjt: VENSRN
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.7e-34 | 32.8 | Show/hide |
Query: MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGY
MDV TAFLN ++E IY+ QP GF+ + V +L +YGLKQA WN + +K GF ++ E +Y + + ++ +YVDD+L+
Subjt: MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGY
Query: LTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYA
+K+ L + MKDLG LG+ I N + +S YI K S ++ K P + SK T ++D+ PY S VG L++
Subjt: LTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYA
Query: MLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGT-KDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIK-QTCIADST
RPDI Y V ++SR+ P H + + +L+YL T+ L Y + L LT Y D+ D ST G V L G V W S K + I +
Subjt: MLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGT-KDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIK-QTCIADST
Query: MEAEYVAACEAAKE
EAEY+ A E E
Subjt: MEAEYVAACEAAKE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.7e-98 | 28.54 | Show/hide |
Query: KRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIE
K F+ + + PLE I+SD+ + + Y Y++ F+D ++RY +Y + KS E F +K +EN I SD GGE++ L +Y +
Subjt: KRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIE
Query: NGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ--NPKK
+GI S P TP+ NG+SER++R +++ +++S + + ++W YA A Y++N +P+ + E+P++ G + R++GC + ++ N K
Subjt: NGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ--NPKK
Query: LEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE-----------DHIRDHQPRSKLVL----------------------------------
L+ +S+ C F+GY L Q +++++S + F E +++ + S V
Subjt: LEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE-----------DHIRDHQPRSKLVL----------------------------------
Query: ---KEISKSAIDKPSSST----------------KVVDKTRKSGQSHPS-----------------QQLREPRRSGR---------------------VV
++S S +D SS+ T+ Q+H S Q L P +S ++
Subjt: ---KEISKSAIDKPSSST----------------KVVDKTRKSGQSHPS-----------------QQLREPRRSGR---------------------VV
Query: HQPDRYLGLIETQVVIP----------DDGI----------------EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQPNDVKPIGCKWI
H P ++ P GI +P T QA+KD ++W AM E+ + N W LV P+ V +GC+WI
Subjt: HQPDRYLGLIETQVVIP----------DDGI----------------EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQPNDVKPIGCKWI
Query: YKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSI
+ +K + G + +KARLVAKGY QR G+DY ETFSPV SIRI+L +A + I Q+DV AFL G L + +YMSQP GFI++D+ VCKL+K++
Subjt: YKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSI
Query: YGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMS
YGLKQA R+W + + + GF ++ + ++ I ++++YVDDIL+ GND L + L+ +F +KD + Y LGI+ R L +S
Subjt: YGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMS
Query: QASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT
Q YI +L+R M +K P LS K E Y VGSL Y + TRPDI Y+V +S++ P +H A+K IL+YL T
Subjt: QASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT
Query: KDY-MLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDN
++ + + L L Y+D+D+ DKD ST+G + L + W S KQ + S+ EAEY + + E W+ LT+L + + P +YCDN
Subjt: KDY-MLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDN
Query: SGAVENSRNIRIADQISH
GA N ++ H
Subjt: SGAVENSRNIRIADQISH
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.9e-104 | 29.58 | Show/hide |
Query: KRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIE
K F+ + + PLE I+SD+ + + Y Y++ F+D ++RY +Y + KS + F +K+ VEN I L SD GGE++ L RDYL +
Subjt: KRSFTGKGLRAKGPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIE
Query: NGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ--NPKK
+GI S P TP+ NG+SER++R +++M +++S + + ++W YA A Y++N +P+ + ++P++ G+ + +++GC + ++ N K
Subjt: NGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ--NPKK
Query: LEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE---------------------------------------------DHIRDHQPR-----
LE +SK C F+GY L +++ S + F E H+ D PR
Subjt: LEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE---------------------------------------------DHIRDHQPR-----
Query: SKLVLKEIS-----KSAIDKPSSSTKVV---DKTRKSGQSHPSQQ-------LREPRRSGRVVHQPDRYLGLIETQVVIP--------------------
S L ++S S+I PSSS + + + Q H +Q L P + + P++ L ++ + P
Subjt: SKLVLKEIS-----KSAIDKPSSSTKVV---DKTRKSGQSHPSQQ-------LREPRRSGRVVHQPDRYLGLIETQVVIP--------------------
Query: --------------------------------DDGI----------------EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQPNDVKPI
DGI +P T QAMKD D+W +AM E+ + N W LV P V +
Subjt: --------------------------------DDGI----------------EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQPNDVKPI
Query: GCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCK
GC+WI+ +K + G + +KARLVAKGY QR G+DY ETFSPV SIRI+L +A + I Q+DV AFL G L + +YMSQP GF+++D+ VC+
Subjt: GCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCK
Query: LKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNK
L+K+IYGLKQA R+W + T + + GF +I + ++ I ++++YVDDIL+ GND L L+ +F +K+ D Y LGI+ R +
Subjt: LKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNK
Query: TLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILK
L +SQ Y +L+R M +K P L+ K P E Y VGSL Y + TRPD+ Y+V +S+Y P DHW A+K +L+
Subjt: TLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILK
Query: YLRRTKDY-MLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPIT
YL T D+ + + L L Y+D+D+ D D ST+G + L + W S KQ + S+ EAEY + + E W+ LT+L + + P
Subjt: YLRRTKDY-MLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPIT
Query: LYCDNSGAVENSRNIRIADQISH
+YCDN GA N ++ H
Subjt: LYCDNSGAVENSRNIRIADQISH
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.5e-78 | 34.39 | Show/hide |
Query: EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL
++P TY +A + + W AMD E+ +M W + P + KPIGCKW+YK K + G ++ +KARLVAKGYTQ+EG+D+ ETFSPV L S++++L
Subjt: EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL
Query: SIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQE----QKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKKVVNSIIAFL
+I+ Y++ + Q+D+ AFLNG+L+E IYM P G+ + + VC LKKSIYGLKQASR W ++F + +GF Q+ + + K+ ++ +
Subjt: SIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQE----QKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKKVVNSIIAFL
Query: VLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVED
++YVDDI++ N+ + ++K L F+++DLG +Y LG++I R+ + + Q Y +L + K +P + S + + D
Subjt: VLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVED
Query: MRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTK-DLILTGYTDSDFQTDKDARKSTSGSVFTLNGGA
+ Y +G LMY + TR DI ++V +S++ P H AV IL Y++ T L Y ++ ++ L ++D+ FQ+ KD R+ST+G L
Subjt: MRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTK-DLILTGYTDSDFQTDKDARKSTSGSVFTLNGGA
Query: VVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISH
+ W+S KQ ++ S+ EAEY A A E +WL +F +L++ + P L+CDN+ A+ + N ++ H
Subjt: VVWRSIKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVENSRNIRIADQISH
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 2.4e-04 | 34.72 | Show/hide |
Query: TRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMY-GTKDLILTGYTDSDFQTDKDARKSTSG
TRPD+ ++V +S++ S AV +L Y++ T L Y T DL L + DSD+ + D R+S +G
Subjt: TRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMY-GTKDLILTGYTDSDFQTDKDARKSTSG
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 1.9e-04 | 31.71 | Show/hide |
Query: NRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
NRT+++ VRSM+ + +F A TA +I+N PS +++ P E+W + + R +GC A++ + KL+ R+K
Subjt: NRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.1e-20 | 31.78 | Show/hide |
Query: FLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK--KGLLPYRYGIHLSKEQCPKTPQ
+L+LYVDDILL G+ L + L+ F MKDLG Y LGIQI + L +SQ Y +++L+ M + K LP + +S + P
Subjt: FLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK--KGLLPYRYGIHLSKEQCPKTPQ
Query: EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDY-MLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTL
+ D R+I VG+L Y L TRPDI Y+V +V + P + +K +L+Y++ T + + ++ L + + DSD+ R+ST+G L
Subjt: EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDY-MLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTL
Query: NGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVW
+ W + +Q ++ S+ E EY A A E W
Subjt: NGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEAVW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.3e-15 | 38.83 | Show/hide |
Query: EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL
++P + A+KD W +AM E++++ N W LV P + +GCKW++K K G + KARLVAKG+ Q EG+ + ET+SPV +IR +L
Subjt: EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL
Query: SIA
++A
Subjt: SIA
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