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CSPI05G14400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G14400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontransmembrane protein 50A
Genome locationChr5:14829716..14830390
RNA-Seq ExpressionCSPI05G14400
SyntenyCSPI05G14400
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007919 - Uncharacterised protein family UPF0220


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067394.1 transmembrane protein 50A [Cucumis melo var. makuwa]2.3e-36100Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
KGN50994.1 hypothetical protein Csa_008144 [Cucumis sativus]2.3e-36100Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
XP_004140320.1 transmembrane protein 50A [Cucumis sativus]2.3e-36100Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
XP_008460472.1 PREDICTED: transmembrane protein 50A [Cucumis melo]2.3e-36100Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
XP_038874577.1 transmembrane protein 50A [Benincasa hispida]3.1e-3698.65Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
TrEMBL top hitse value%identityAlignment
A0A0A0KQ70 Uncharacterized protein1.1e-36100Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
A0A1S3CCJ8 transmembrane protein 50A1.1e-36100Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
A0A5D3DT37 Transmembrane protein 50A1.1e-36100Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
A0A6J1JKY2 transmembrane protein 50A-like2.5e-3698.65Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
A0A6J1JRP9 transmembrane protein 50A2.5e-3698.65Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVR+EDIDYSPYEEGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G36980.1 unknown protein7.3e-3686.49Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR
        MDLAELW+IFGPG +GAVFG GWWFWVDAVVCSS+ V FVHYLPGIFAS  ALMFNCVRKEDIDYSPY+EGEWR
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGCGGAGCTTTGGTCAATTTTCGGCCCAGGCGTTGCCGGAGCTGTGTTTGGCGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCCGT
CTCCTTTGTCCACTACCTCCCAGGTATTTTTGCTTCTTTTGCGGCTTTGATGTTCAATTGCGTTCGAAAAGAAGACATCGATTATTCTCCATACGAGGAGGGGGAATGGA
GGTGA
mRNA sequenceShow/hide mRNA sequence
CGCAATGATATATTTCCCCGAATATCAGAGCTTCGAGGGAAGGTATGGGAGTTATAACATTGAGCTGGAAAAGGGTGTGAGCCTGTGAGGTGTGCGATCATTCAGTTCAC
ACTACCCTCCCCAGATCGACCCGCTTCCAACAACCTGCGTAAGGAGAAAGCAAAAACAAAGAGCCCCACAAATGGATTTGGCGGAGCTTTGGTCAATTTTCGGCCCAGGC
GTTGCCGGAGCTGTGTTTGGCGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCCGTCTCCTTTGTCCACTACCTCCCAGGTATTTTTGCTTCTTT
TGCGGCTTTGATGTTCAATTGCGTTCGAAAAGAAGACATCGATTATTCTCCATACGAGGAGGGGGAATGGAGGTGACAAGTTTATGCTTTATCTACGTAGCTCTCTTCCG
TCTTTGCTTTCTGGATGTTCTATTGTTTAAATCTGTCAGTAAGCATGTTGCGACCCGCTTTGCCTAGTAATTCGTCTAATTGAAAGGAATGTCACAGTGTTCTTCTTCGA
CAAGGTTATGTGGAATGTGATTTAGTACCTTGCTAGGATTATTC
Protein sequenceShow/hide protein sequence
MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWR