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CSPI05G14840 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G14840
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr5:15497259..15497819
RNA-Seq ExpressionCSPI05G14840
SyntenyCSPI05G14840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011658449.1 uncharacterized protein LOC105436008 [Cucumis sativus]3.6e-7082.08Show/hide
Query:  MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSER
        MAS+SQQTKENG M I YPML PHNYT+WTIK EAILD Q VWEAIEP RG EVDVKKDKKA  YILQCILEDVLLQ+AKKK+AKEIWD+LKTRYLGSER
Subjt:  MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSER

Query:  VKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK
        VKMARV  LKSEFNVL+MKETETIDEFAGKIS L SKFTTL VALEDSSLVKKL+DSVP+KYL IV  +  F+
Subjt:  VKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK

XP_031737549.1 uncharacterized protein LOC116402439 [Cucumis sativus]2.8e-7890.17Show/hide
Query:  MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSER
        MASISQQTKENGGM ILY MLTPHNYTVWTIKAEAILDAQGV EAIEPARGAEVDVKKDKKAR+YILQCI EDVLLQ+AKKKTAKEIWDSLKTRYLGSER
Subjt:  MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSER

Query:  VKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK
        VKMARVQTLKSEF+VL+MKETETIDEFAGKISGL SKFTTL VALEDSSLVKKL+DSVP+KYLPIV G+  F+
Subjt:  VKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK

XP_031741709.1 uncharacterized protein LOC116403904 [Cucumis sativus]4.0e-6986.25Show/hide
Query:  MLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF
        M ILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPA+GAEVDVKKDKK  AYILQCI EDVLLQ+AKKKTAKEIWDSLKTRYLGSE+VKMARVQTLKSEF
Subjt:  MLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF

Query:  NVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK
        NVL+MKETET+DEF+GKISGL SKFTTL VALEDSSLVKKL+D VP+KYL IV  +  F+
Subjt:  NVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK

XP_031741713.1 uncharacterized protein LOC116403908 [Cucumis sativus]5.1e-7289.38Show/hide
Query:  MLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF
        M ILYPMLTPHNYTVWTIKAEAIL+AQGVWEAIEPARGAEVDVKKDKKARAYILQCI EDVLLQ+AKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF
Subjt:  MLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF

Query:  NVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK
        NVL+MKE ETIDEF GKISGL SKFTTL VALEDSSLV KL+DSVP+KYLPIV G+  F+
Subjt:  NVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK

XP_031745073.1 uncharacterized protein LOC116405251 [Cucumis sativus]2.1e-7889.6Show/hide
Query:  MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSER
        M S SQQTKENGGM ILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKA AYILQCI EDVLLQ+AKKKTAKEIWDSLKTRYLGSER
Subjt:  MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSER

Query:  VKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK
        VKMARVQTLK EFNVL+MKETE IDEFAGKISGL SKFTTL VAL+DSSLVKKL+DSVP+KYLPIVAG+  F+
Subjt:  VKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK

TrEMBL top hitse value%identityAlignment
A0A251VAV7 Putative zinc finger, CCHC-type4.2e-4857.89Show/hide
Query:  ASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERV
        A+ S   KE   + +  P LT  NYT W IK EA++DAQG+WE++EP   A +D KK+K ARA+I Q I EDVLLQVAKKKTAKEIW+SLKTRY+G+ERV
Subjt:  ASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERV

Query:  KMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF
        + AR+ TL SEF  L+ K+ E+ID+FAGK+SGLGSK+ +L   LED  LV+KL+D+VP++YL +VA M  +
Subjt:  KMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF

A0A5A7SWG6 Uncharacterized protein1.6e-5282.09Show/hide
Query:  AEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLV
        A+V+ KKDK ARAYILQCI +DVLLQ+AKKKTAKEIWDSLK +YLGSERVKMARVQTLK EF+VLQMKETETIDEFAGKISGL SKF+TL VALEDSSLV
Subjt:  AEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLV

Query:  KKLIDSVPEKYLPIVAGMSNFKISKPCHLKKQLD
        KKL+DSVP KYLPI+AG+   KIS PCHLKK+ D
Subjt:  KKLIDSVPEKYLPIVAGMSNFKISKPCHLKKQLD

A0A5N6M0G6 Uncharacterized protein1.2e-4756.98Show/hide
Query:  MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSER
        +A+ SQ  KE G + +  P LT  NYT W IK EA++DAQG+WE +EP  GA VD +K+K ARA+I Q I EDVL+QVAKKKTA EIW+SLK RY+G++R
Subjt:  MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSER

Query:  VKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF
        V+ AR+ TLK+EF +L+MKE E+IDEFAGK+S + +K+ +L   LED  LV KL+DSVPEK+L +VA +  +
Subjt:  VKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF

A0A5N6NYJ8 CCHC-type domain-containing protein7.2e-4855.81Show/hide
Query:  MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSER
        +A+ S   K+   + +  P LT  NYT W IK EA++DAQG+WE+IEP  GA VD KK+K +RA+I Q I EDVLLQVAKKKTAKEIWDSLK RY+G++R
Subjt:  MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSER

Query:  VKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF
        V+ AR+ TLK+EF +L+MKE E++DEFAGK++G+ +K+ +L   ++D  LV+KL+DSVP+KYL +VA +  +
Subjt:  VKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF

Q0JH75 Os01g0879800 protein1.6e-4757.14Show/hide
Query:  SQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMA
        + ++   G + + YP+LT  NY+ W IK EA ++AQG+W+AIEPA    VD+KKDK+ARA +   + EDVL Q+AKKKTAKE+W+SLKTR+LG ERVK A
Subjt:  SQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMA

Query:  RVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF
        RVQTLKS+F  L MK+TE+IDEFAGKISGL +K + L V ++D   VKKL+DSVP+K+L ++A +  F
Subjt:  RVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48720.1 unknown protein2.8e-0432.53Show/hide
Query:  PMLTPHNYTVWTIKAEAILDAQGVWEAIEPA---------------RGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKE
        P+LT  NY  W+++ +AIL A  VWE +E                  G     K+DKKA   I Q + ED   +V +  +AK+
Subjt:  PMLTPHNYTVWTIKAEAILDAQGVWEAIEPA---------------RGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCATCTCGCAGCAAACAAAGGAGAATGGTGGAATGCTGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGCAATCCT
CGATGCCCAAGGAGTTTGGGAAGCAATAGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGCGTGCATACATTCTCCAATGCATCCTGGAAGATG
TTCTTCTACAAGTCGCTAAGAAGAAGACCGCAAAGGAAATATGGGATAGTCTCAAGACAAGGTACTTGGGCAGTGAGCGAGTGAAGATGGCGAGAGTTCAAACCTTGAAA
AGTGAGTTTAATGTTCTTCAGATGAAGGAAACCGAGACGATCGATGAGTTTGCAGGAAAAATCAGCGGATTAGGAAGCAAGTTCACCACCCTCGAAGTTGCACTTGAGGA
TTCATCATTAGTCAAGAAGCTCATCGATTCCGTCCCCGAAAAATATCTTCCCATTGTCGCCGGAATGAGCAATTTCAAGATCTCGAAACCATGCCATTTGAAGAAGCAAT
TGGACAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCATCTCGCAGCAAACAAAGGAGAATGGTGGAATGCTGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGCAATCCT
CGATGCCCAAGGAGTTTGGGAAGCAATAGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGCGTGCATACATTCTCCAATGCATCCTGGAAGATG
TTCTTCTACAAGTCGCTAAGAAGAAGACCGCAAAGGAAATATGGGATAGTCTCAAGACAAGGTACTTGGGCAGTGAGCGAGTGAAGATGGCGAGAGTTCAAACCTTGAAA
AGTGAGTTTAATGTTCTTCAGATGAAGGAAACCGAGACGATCGATGAGTTTGCAGGAAAAATCAGCGGATTAGGAAGCAAGTTCACCACCCTCGAAGTTGCACTTGAGGA
TTCATCATTAGTCAAGAAGCTCATCGATTCCGTCCCCGAAAAATATCTTCCCATTGTCGCCGGAATGAGCAATTTCAAGATCTCGAAACCATGCCATTTGAAGAAGCAAT
TGGACAGATGA
Protein sequenceShow/hide protein sequence
MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLK
SEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFKISKPCHLKKQLDR