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CSPI05G14880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G14880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein P200-like isoform X4
Genome locationChr5:15621686..15622072
RNA-Seq ExpressionCSPI05G14880
SyntenyCSPI05G14880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055115.1 putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa]5.1e-2369.91Show/hide
Query:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS
        SQ +I NAIVQ EEALVEIT TSSNNN VQS          LANQFPR  IEA S VKEQ  S+LMDN DA EEEDEKEQNKA CI     QIVEKND+S
Subjt:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS

Query:  LRQLKKMFKEEFQ
        LRQLKKMFKE+ Q
Subjt:  LRQLKKMFKEEFQ

MBC9849949.1 hypothetical protein [Adiantum capillus-veneris]4.0e-2064.17Show/hide
Query:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKND-M
        SQ EI NAIVQ EEALVEIT TSSNNN VQS          LANQFPR  IEA S V+EQ+IS+LMDN DAEEEE EKEQNKA  I     Q+V KND  
Subjt:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKND-M

Query:  SLRQLKKMFKEEFQ--HKNL
        SLRQL+K+FKE+ Q  HK +
Subjt:  SLRQLKKMFKEEFQ--HKNL

XP_008467303.1 PREDICTED: probable beta-tubulin polyglutamylase [Cucumis melo]1.3e-2370.8Show/hide
Query:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS
        SQ +I NAIVQ EEALVEIT TSSNNN VQS          LANQFPR  IEA S VKEQ IS+LMDN DA EEEDEKEQNKA CI     QIVEKND+S
Subjt:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS

Query:  LRQLKKMFKEEFQ
        LRQLKKMFKE+ Q
Subjt:  LRQLKKMFKEEFQ

XP_038906922.1 interaptin-like isoform X1 [Benincasa hispida]9.9e-2769.91Show/hide
Query:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS
        SQ +I N  VQ EEALVEI PTSSNNN VQS+ SF A+QL LA QFPR  +   S V+EQ+I +LMDNSDAEEEED KEQ KANCI   E+QIVE NDMS
Subjt:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS

Query:  LRQLKKMFKEEFQ
        LRQLKKMFKE+ Q
Subjt:  LRQLKKMFKEEFQ

XP_038906923.1 interaptin-like isoform X2 [Benincasa hispida]9.9e-2769.91Show/hide
Query:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS
        SQ +I N  VQ EEALVEI PTSSNNN VQS+ SF A+QL LA QFPR  +   S V+EQ+I +LMDNSDAEEEED KEQ KANCI   E+QIVE NDMS
Subjt:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS

Query:  LRQLKKMFKEEFQ
        LRQLKKMFKE+ Q
Subjt:  LRQLKKMFKEEFQ

TrEMBL top hitse value%identityAlignment
A0A0A0KL59 Uncharacterized protein7.4e-2063.79Show/hide
Query:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS
        SQ EI NAIVQ EEALVEIT TSSNNN VQS          LANQFPR  IEA S V+EQ+IS+LMDN DAEEEE EKEQN          Q V KND S
Subjt:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS

Query:  LRQLKKMFKEEFQHKN
        LRQLKK+FKE+ Q  N
Subjt:  LRQLKKMFKEEFQHKN

A0A1S3CT90 probable beta-tubulin polyglutamylase6.5e-2470.8Show/hide
Query:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS
        SQ +I NAIVQ EEALVEIT TSSNNN VQS          LANQFPR  IEA S VKEQ IS+LMDN DA EEEDEKEQNKA CI     QIVEKND+S
Subjt:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS

Query:  LRQLKKMFKEEFQ
        LRQLKKMFKE+ Q
Subjt:  LRQLKKMFKEEFQ

A0A5A7UN97 Putative beta-tubulin polyglutamylase2.5e-2369.91Show/hide
Query:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS
        SQ +I NAIVQ EEALVEIT TSSNNN VQS          LANQFPR  IEA S VKEQ  S+LMDN DA EEEDEKEQNKA CI     QIVEKND+S
Subjt:  SQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMS

Query:  LRQLKKMFKEEFQ
        LRQLKKMFKE+ Q
Subjt:  LRQLKKMFKEEFQ

A0A6J1EKY6 uncharacterized protein LOC111435613 isoform X31.2e-1755.56Show/hide
Query:  TLRSQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPR-QIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEK
        T  S  +I N I+Q EEAL+E++  SSNNN +QS+ S  A QL LANQFPR  ++E  S  KEQ+  +LMDNSDAEEE        ANC    ++Q VEK
Subjt:  TLRSQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPR-QIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEK

Query:  NDMSLRQLKKMFKEEFQ
        NDMSLRQL+KMFKE+ Q
Subjt:  NDMSLRQLKKMFKEEFQ

A0A6J1ELB4 uncharacterized protein LOC111435613 isoform X21.2e-1755.56Show/hide
Query:  TLRSQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPR-QIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEK
        T  S  +I N I+Q EEAL+E++  SSNNN +QS+ S  A QL LANQFPR  ++E  S  KEQ+  +LMDNSDAEEE        ANC    ++Q VEK
Subjt:  TLRSQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPR-QIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEK

Query:  NDMSLRQLKKMFKEEFQ
        NDMSLRQL+KMFKE+ Q
Subjt:  NDMSLRQLKKMFKEEFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCAATTACTTTACGATCACAATCTGAAATCTCAAATGCCATTGTTCAATCTGAGGAAGCTTTGGTGGAAATCACTCCCACATCCTCCAACAACAATAGAGTTCA
ATCAGTGTCCTCTTTTCCAGCGGAGCAATTGTTATTGGCAAACCAATTTCCTAGGCAAATAATAGAAGCCATATCTCTAGTTAAAGAACAAAGCATTAGTATGCTAATGG
ACAACTCAGATGCTGAGGAAGAAGAAGATGAAAAGGAACAGAACAAAGCAAATTGCATTGAGAGCCATGAGAGGCAAATTGTAGAGAAAAATGATATGAGCCTAAGGCAA
TTGAAGAAAATGTTCAAGGAAGAGTTCCAACATAAAAATCTCCTCAGTTTTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCAATTACTTTACGATCACAATCTGAAATCTCAAATGCCATTGTTCAATCTGAGGAAGCTTTGGTGGAAATCACTCCCACATCCTCCAACAACAATAGAGTTCA
ATCAGTGTCCTCTTTTCCAGCGGAGCAATTGTTATTGGCAAACCAATTTCCTAGGCAAATAATAGAAGCCATATCTCTAGTTAAAGAACAAAGCATTAGTATGCTAATGG
ACAACTCAGATGCTGAGGAAGAAGAAGATGAAAAGGAACAGAACAAAGCAAATTGCATTGAGAGCCATGAGAGGCAAATTGTAGAGAAAAATGATATGAGCCTAAGGCAA
TTGAAGAAAATGTTCAAGGAAGAGTTCCAACATAAAAATCTCCTCAGTTTTAAGTGA
Protein sequenceShow/hide protein sequence
MIPITLRSQSEISNAIVQSEEALVEITPTSSNNNRVQSVSSFPAEQLLLANQFPRQIIEAISLVKEQSISMLMDNSDAEEEEDEKEQNKANCIESHERQIVEKNDMSLRQ
LKKMFKEEFQHKNLLSFK