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CSPI05G15000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G15000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionpolcalcin Ole e 3
Genome locationChr5:15789063..15789317
RNA-Seq ExpressionCSPI05G15000
SyntenyCSPI05G15000
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140303.1 polcalcin Ole e 3 [Cucumis sativus]2.4e-3798.81Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_016902555.1 PREDICTED: polcalcin Ole e 3 [Cucumis melo]5.3e-3797.62Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKISS+ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_022141635.1 polcalcin Bet v 4 [Momordica charantia]1.6e-3696.43Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQD+ ERDRIFKRFDANGDGKIS+AELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_031392869.1 polcalcin Ole e 3 [Punica granatum]2.5e-3491.67Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQ+ AER+RIFKRFDANGDGKISSAELG+ALKTLGSVTA+EVQRMMAEIDTDGDGFIS+EEFTDFARANRGL+KDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_038875780.1 polcalcin Ole e 3 [Benincasa hispida]1.2e-3696.43Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKIS++ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

TrEMBL top hitse value%identityAlignment
A0A0A0KQB8 Uncharacterized protein1.2e-3798.81Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A1S4E3J8 polcalcin Ole e 32.6e-3797.62Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKISS+ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A2I0KIR2 polcalcin Ole e 31.2e-3491.67Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQ+ AER+RIFKRFDANGDGKISSAELG+ALKTLGSVTA+EVQRMMAEIDTDGDGFIS+EEFTDFARANRGL+KDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A5A7V407 Polcalcin Ole e 32.6e-3797.62Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKISS+ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A6J1CIN1 polcalcin Bet v 47.5e-3796.43Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQD+ ERDRIFKRFDANGDGKIS+AELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 36.8e-3586.9Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQ+ AE +RIFKRFDANGDGKISS+ELGE LKTLGSVT +E+QRMMAEIDTDGDGFIS+EEFT FARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

O81701 Polcalcin Aln g 42.9e-3384.71Show/hide
Query:  MADD-PQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADD PQDQAE +RIFK FDANGDGKIS++ELG+ALKTLGSVT DEV+ MMAEIDTDGDGFIS++EFT+FARANRGLVKDVAKIF
Subjt:  MADD-PQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Q39419 Polcalcin Bet v 41.2e-3485.88Show/hide
Query:  MADD-PQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADD PQD+AER+RIFKRFDANGDGKIS+AELGEALKTLGS+T DEV+ MMAEIDTDGDGFIS++EFTDF RANRGL+KDVAKIF
Subjt:  MADD-PQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Q84V36 Polcalcin Che a 31.3e-3385.37Show/hide
Query:  DDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        D PQD A+R+RIFKRFD NGDGKISS+ELG+ALKTLGSVT DEV+RMMAEIDTDGDGFIS++EFTDFARANRGLVKDV+KIF
Subjt:  DDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Q8VWY6 Polcalcin Nic t 19.8e-3482.14Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MA+DPQD A+R+RIFKRFD NGDGKISSAELGE LK LGSVT++EVQ MMAE+DTDGDGFISYEEF +FARANRGL+KDVAK+F
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein1.6e-1043.66Show/hide
Query:  DPQDQAERDRIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARAN
        D  +  E  ++F +FD+NGDGKIS  ELG   K +G S T  E+ R++ E+DTD DG+I+ +EF+   R++
Subjt:  DPQDQAERDRIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARAN

AT1G24620.1 EF hand calcium-binding protein family5.4e-1150Show/hide
Query:  ERDRIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTD
        E + +FK+FD NGDGKISS ELG  + +LG  V  +E+++ + EID  GDG+I++EEF +
Subjt:  ERDRIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTD

AT1G73630.1 EF hand calcium-binding protein family9.8e-1346.67Show/hide
Query:  PQDQAERDRIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVK
        P    E  ++F +FDANGDGKIS +ELG   K++G S T +E+ R++ EID D DGFI+ EEF    R++   V+
Subjt:  PQDQAERDRIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVK

AT3G03430.1 Calcium-binding EF-hand family protein8.0e-3176.54Show/hide
Query:  DPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        D  ++AE DRIFK+FDANGDGKIS+AELG+ALK LGSVT ++++RMMAEIDTDGDG+ISY+EF DFA ANRGL+KDVAKIF
Subjt:  DPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

AT5G17480.1 pollen calcium-binding protein 15.5e-3282.72Show/hide
Query:  DPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        D  ++AE DRIFK+FDANGDGKIS+AEL EALKTLGSVTAD+V+RMMAEIDTDGDG ISY+EFTDFA ANRGL+KDVAKIF
Subjt:  DPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATGATCCTCAAGACCAAGCTGAACGTGACCGCATTTTCAAGCGCTTTGACGCCAATGGCGACGGTAAGATCTCTTCCGCTGAGCTTGGGGAAGCCTTGAAGAC
CCTCGGCTCCGTCACCGCCGACGAAGTACAACGGATGATGGCTGAGATCGACACTGACGGTGATGGCTTCATTTCGTACGAAGAGTTCACAGATTTCGCTCGTGCTAACC
GTGGATTAGTCAAGGATGTTGCTAAGATATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATGATCCTCAAGACCAAGCTGAACGTGACCGCATTTTCAAGCGCTTTGACGCCAATGGCGACGGTAAGATCTCTTCCGCTGAGCTTGGGGAAGCCTTGAAGAC
CCTCGGCTCCGTCACCGCCGACGAAGTACAACGGATGATGGCTGAGATCGACACTGACGGTGATGGCTTCATTTCGTACGAAGAGTTCACAGATTTCGCTCGTGCTAACC
GTGGATTAGTCAAGGATGTTGCTAAGATATTCTAA
Protein sequenceShow/hide protein sequence
MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF