| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG8480261.1 hypothetical protein CXB51_024850 [Gossypium anomalum] | 7.4e-63 | 34.2 | Show/hide |
Query: KALLGQQKTHKDKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSSHKENHSGDGLFVKDALASTLDQANHVNPLGK-----
K +L + + + E+ +LL SL +Y ++ + Y R+S+ D + +L + + H K + G+GL V+ D G+
Subjt: KALLGQQKTHKDKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSSHKENHSGDGLFVKDALASTLDQANHVNPLGK-----
Query: -------HDWVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQ
+W+LDSGCT+HM+P R WF TY +S V MGNN IAG+GT+ +K+ DG V+ L +VR+VP LK NLISL LDS G Y + GV +
Subjt: -------HDWVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQ
Query: VFMGSKLVLVGE-KVNDLFIIKGVEMIEEANTVLSLNLTEADI---WHKRLSHISQKGLEALSKQDILP-QDICSKL---------QSKKTKLHQSTTHN
+ GS +V+ G+ K L++++G + +A V S +L++ DI WH RL H+S+ G+ LSK+ +L Q IC KL + K+ + + +
Subjt: VFMGSKLVLVGE-KVNDLFIIKGVEMIEEANTVLSLNLTEADI---WHKRLSHISQKGLEALSKQDILP-QDICSKL---------QSKKTKLHQSTTHN
Query: KRNPGLHPFGSMGSASTPSLSSS--------------------------------------RESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNA
K G + PS + + GI R+ TV +TPQQNGVAER+NRTIME+VRC+LSNA
Subjt: KRNPGLHPFGSMGSASTPSLSSS--------------------------------------RESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNA
Query: ILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGYADQNKG
L + FW E A+ + +NRSP ++ TP+E WS +P + +DLK+FGC YA N G
Subjt: ILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGYADQNKG
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| RVW99173.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.6e-62 | 35.09 | Show/hide |
Query: LGDENEAFVLLNSLSEAYKEVKNALKYGRDSI-----KTDVIISALRTRELEIHSSHKENHSGDGLFVKD-------ALASTLDQANHVNPLGKHD----
+ DE++A +LL SL Y +K+A+ YGRDS+ K S +T++ + HKE H F KD + T+++ + L +D
Subjt: LGDENEAFVLLNSLSEAYKEVKNALKYGRDSI-----KTDVIISALRTRELEIHSSHKENHSGDGLFVKD-------ALASTLDQANHVNPLGKHD----
Query: -----------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGV
W+LDSGC++HM P +AWF ++E V +GNN I G GTV +K DG ++L +VR++P LK NLISLGMLD G +K +
Subjt: -----------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGV
Query: FQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLEALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM
+V GS V+ N L+ + G +I++A+TVL ++ +WH+RL H+S KGL+ L KQ +L + L + + T K +H +
Subjt: FQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLEALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM
Query: ---------GSASTPSL------------------------SSSRESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYT
G + PS+ S ++ GI H+TV YTPQQNG+AER+NRTI+ER+RC+LS++ L + FW E A VV+
Subjt: ---------GSASTPSL------------------------SSSRESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYT
Query: LNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGY
+NRSP ++L F TP+EKW+ + LKVFGC Y
Subjt: LNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGY
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.6e-62 | 32 | Show/hide |
Query: DKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSS---------------------------------------HKENHSGD
+K+ DEN+A +LLNSL E Y+EVK A+KYGRDS+ +++ AL+TR LEI HKE H
Subjt: DKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSS---------------------------------------HKENHSGD
Query: GLFVKDALASTLDQANHVNPLGKHD----------------------------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTM
+ + ++ +AN + + W++DSGCT+HMTP R + ++++ V +G+N ++ G G+V +
Subjt: GLFVKDALASTLDQANHVNPLGKHD----------------------------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTM
Query: KLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEAD-IWHKRLSHISQKGL
DG V++L NVR+VP LK NLISLG LD GC K + GV +V GS + L G + L++++G + A + S +T+ +WHKRL+H+S++GL
Subjt: KLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEAD-IWHKRLSHISQKGL
Query: EALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM---------GSASTPSLSSSR------------------------------------
+ALS+Q +L +L + + +T K G H + G S+ SR
Subjt: EALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM---------GSASTPSLSSSR------------------------------------
Query: ----------------------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEK
GITRH TVTYTPQQNG+AER NRTIMER RCLL+NA L KFW E A Y +NRSP T+L TP+E
Subjt: ----------------------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEK
Query: WSKHPPSLNDLKVFGCVGYADQNKG
W+ PSL L+VFGC YA G
Subjt: WSKHPPSLNDLKVFGCVGYADQNKG
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| XP_038880322.1 uncharacterized protein LOC120071961 [Benincasa hispida] | 9.3e-74 | 42.89 | Show/hide |
Query: KIKALLGQQKTHKDKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSSHKENHSGDGLFVKDALASTLDQANHVNPLGKHDW
+ K ++ + K+ +K+GDENEAFVLLNSL E YKEVKNALKYGR+S+ D IISALRTRELE+ S KE +G
Subjt: KIKALLGQQKTHKDKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSSHKENHSGDGLFVKDALASTLDQANHVNPLGKHDW
Query: VLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLV
+ WF+TY+++ ESV+MGNN I G+G+ +GK G+ +V SK+VLV
Subjt: VLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLV
Query: GEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLEALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSMGSASTPSLSSSR
GE+VNDL+I++GVEM+ A TV + +LTEAD+WHKRLSHIS+KG + L ++ C ++ + +S K F G + TPSLS SR
Subjt: GEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLEALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSMGSASTPSLSSSR
Query: -----------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDL
E GI+R +TV YTPQQNGVAERLN TIME VRCLLS+AIL E +W E AY+VYTLNR PHTSL LTPEE W+ HPP+L++L
Subjt: -----------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDL
Query: K
K
Subjt: K
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| XP_038904504.1 uncharacterized protein LOC120090876 [Benincasa hispida] | 7.9e-73 | 39.66 | Show/hide |
Query: MAITRVEIEKFDGNGDFVLWKAKIKALLGQQKTHK---------------------------------------DKLGDENEAFVLLNSLSEAYKEVKNA
M++ R E++KFD GDF LWKAKIKA+L QQK + +KLGDENEA+VLLNSL E Y+E+KNA
Subjt: MAITRVEIEKFDGNGDFVLWKAKIKALLGQQKTHK---------------------------------------DKLGDENEAFVLLNSLSEAYKEVKNA
Query: LKYGRDSIKTDVIISALRTRELEIHSSHKENHSGDGLFVKDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIA
LKY RD+I TD IISALRTREL + K+ SG+G
Subjt: LKYGRDSIKTDVIISALRTRELEIHSSHKENHSGDGLFVKDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIA
Query: GIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSH
NVR+VP LK NLISLGMLD++GCEYKG A + +TEAD+WHKRLSH
Subjt: GIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSH
Query: ISQKGLEALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNP------GLHPFGSMGSASTPSLSSSRESGITRHKTVTYTPQQNGVAERLNRTIMERVRC
IS KGLE LSKQ ILP+ ++ K Q TT + GL P S+ +S +E+ ITRH+T+ +T Q+NGVAERLNRTIMERVRC
Subjt: ISQKGLEALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNP------GLHPFGSMGSASTPSLSSSRESGITRHKTVTYTPQQNGVAERLNRTIMERVRC
Query: LLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGYADQNKG
LLS+A L EK+W E A+Y ++TLNR PH+SL LT EEKW+KHPP+L +L+VFGCVGY Q++G
Subjt: LLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGYADQNKG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438IR25 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.0e-63 | 35.09 | Show/hide |
Query: LGDENEAFVLLNSLSEAYKEVKNALKYGRDSI-----KTDVIISALRTRELEIHSSHKENHSGDGLFVKD-------ALASTLDQANHVNPLGKHD----
+ DE++A +LL SL Y +K+A+ YGRDS+ K S +T++ + HKE H F KD + T+++ + L +D
Subjt: LGDENEAFVLLNSLSEAYKEVKNALKYGRDSI-----KTDVIISALRTRELEIHSSHKENHSGDGLFVKD-------ALASTLDQANHVNPLGKHD----
Query: -----------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGV
W+LDSGC++HM P +AWF ++E V +GNN I G GTV +K DG ++L +VR++P LK NLISLGMLD G +K +
Subjt: -----------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGV
Query: FQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLEALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM
+V GS V+ N L+ + G +I++A+TVL ++ +WH+RL H+S KGL+ L KQ +L + L + + T K +H +
Subjt: FQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLEALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM
Query: ---------GSASTPSL------------------------SSSRESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYT
G + PS+ S ++ GI H+TV YTPQQNG+AER+NRTI+ER+RC+LS++ L + FW E A VV+
Subjt: ---------GSASTPSL------------------------SSSRESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYT
Query: LNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGY
+NRSP ++L F TP+EKW+ + LKVFGC Y
Subjt: LNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGY
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| A0A5A7TP18 Putative gag-pol polyprotein | 6.7e-62 | 31.81 | Show/hide |
Query: DKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSS---------------------------------------HKENHSGD
+K+ DEN+A +LLNSL E Y+EVK A+KYGRDS+ +++ AL+TR LEI HKE H
Subjt: DKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSS---------------------------------------HKENHSGD
Query: GLFVKDALASTLDQANHVNPLGKHD----------------------------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTM
+ + ++ +AN + + W++DSGCT+HMTP R + ++++ V +G+N ++ G G+V +
Subjt: GLFVKDALASTLDQANHVNPLGKHD----------------------------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTM
Query: KLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEAD-IWHKRLSHISQKGL
DG V++L NV +VP LK NLISLG LD GC K + GV +V GS + L G + L++++G + A + S +T+ +WHKRL+H+S++GL
Subjt: KLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEAD-IWHKRLSHISQKGL
Query: EALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM---------GSASTPSLSSSR------------------------------------
+ALS+Q +L +L + + +T K G H + G S+ SR
Subjt: EALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM---------GSASTPSLSSSR------------------------------------
Query: ----------------------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEK
GITRH TVTYTPQQNG+AER NRTIMER RCLL+NA L KFW E A Y +NRSP T+L TP+E
Subjt: ----------------------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEK
Query: WSKHPPSLNDLKVFGCVGYADQNKG
W+ PSL L+VFGC YA G
Subjt: WSKHPPSLNDLKVFGCVGYADQNKG
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| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 6.7e-62 | 31.49 | Show/hide |
Query: DKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSS---------------------------------------HKENHSGD
+K+ DEN+A +LLNSL E Y+EVK A+KYG DS+ +++ AL+TR LEI HKE H
Subjt: DKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSS---------------------------------------HKENHSGD
Query: GLFVKDALASTLDQANHVNPLGKHD----------------------------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTM
+ + ++ +AN + + W++DSGCT+HMTP R + ++++ V +G+N ++ G G+V +
Subjt: GLFVKDALASTLDQANHVNPLGKHD----------------------------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTM
Query: KLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLE
DG V++L NVR+VP LK NLISLG LD GC K + GV +V GS + L G + L++++G + A + +WHKRL+H+S++GL+
Subjt: KLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLE
Query: ALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM---------GSASTPSLSSSR-------------------------------------
ALS+Q +L +L + + +T K G H + G S+ SR
Subjt: ALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM---------GSASTPSLSSSR-------------------------------------
Query: ---------------------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKW
GITRH TVTYTPQQNG+AER NRTIMER RCLL+NA L KFW E A Y +NRSP T+L TP+E W
Subjt: ---------------------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKW
Query: SKHPPSLNDLKVFGCVGYADQNKG
+ PSL L+VFGC YA G
Subjt: SKHPPSLNDLKVFGCVGYADQNKG
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| A0A5A7UB25 Putative gag-pol polyprotein | 8.0e-63 | 32 | Show/hide |
Query: DKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSS---------------------------------------HKENHSGD
+K+ DEN+A +LLNSL E Y+EVK A+KYGRDS+ +++ AL+TR LEI HKE H
Subjt: DKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSS---------------------------------------HKENHSGD
Query: GLFVKDALASTLDQANHVNPLGKHD----------------------------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTM
+ + ++ +AN + + W++DSGCT+HMTP R + ++++ V +G+N ++ G G+V +
Subjt: GLFVKDALASTLDQANHVNPLGKHD----------------------------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTM
Query: KLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEAD-IWHKRLSHISQKGL
DG V++L NVR+VP LK NLISLG LD GC K + GV +V GS + L G + L++++G + A + S +T+ +WHKRL+H+S++GL
Subjt: KLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEAD-IWHKRLSHISQKGL
Query: EALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM---------GSASTPSLSSSR------------------------------------
+ALS+Q +L +L + + +T K G H + G S+ SR
Subjt: EALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM---------GSASTPSLSSSR------------------------------------
Query: ----------------------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEK
GITRH TVTYTPQQNG+AER NRTIMER RCLL+NA L KFW E A Y +NRSP T+L TP+E
Subjt: ----------------------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEK
Query: WSKHPPSLNDLKVFGCVGYADQNKG
W+ PSL L+VFGC YA G
Subjt: WSKHPPSLNDLKVFGCVGYADQNKG
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| A0A5D3DNU1 Putative gag-pol polyprotein | 8.0e-63 | 32 | Show/hide |
Query: DKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSS---------------------------------------HKENHSGD
+K+ DEN+A +LLNSL E Y+EVK A+KYGRDS+ +++ AL+TR LEI HKE H
Subjt: DKLGDENEAFVLLNSLSEAYKEVKNALKYGRDSIKTDVIISALRTRELEIHSS---------------------------------------HKENHSGD
Query: GLFVKDALASTLDQANHVNPLGKHD----------------------------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTM
+ + ++ +AN + + W++DSGCT+HMTP R + ++++ V +G+N ++ G G+V +
Subjt: GLFVKDALASTLDQANHVNPLGKHD----------------------------WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTM
Query: KLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEAD-IWHKRLSHISQKGL
DG V++L NVR+VP LK NLISLG LD GC K + GV +V GS + L G + L++++G + A + S +T+ +WHKRL+H+S++GL
Subjt: KLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEAD-IWHKRLSHISQKGL
Query: EALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM---------GSASTPSLSSSR------------------------------------
+ALS+Q +L +L + + +T K G H + G S+ SR
Subjt: EALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLHPFGSM---------GSASTPSLSSSR------------------------------------
Query: ----------------------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEK
GITRH TVTYTPQQNG+AER NRTIMER RCLL+NA L KFW E A Y +NRSP T+L TP+E
Subjt: ----------------------------ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEK
Query: WSKHPPSLNDLKVFGCVGYADQNKG
W+ PSL L+VFGC YA G
Subjt: WSKHPPSLNDLKVFGCVGYADQNKG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.3e-13 | 43.01 | Show/hide |
Query: ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSL--GFLTPEEKWSKHPPSLNDLKVFGCVGY
+ GI+ H TV +TPQ NGV+ER+ RTI E+ R ++S A L++ FW E Y +NR P +L TP E W P L L+VFG Y
Subjt: ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSL--GFLTPEEKWSKHPPSLNDLKVFGCVGY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.3e-33 | 29.97 | Show/hide |
Query: DWVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLV
+WV+D+ ++H TP R F Y +V MGN + S IAGIG + +K G +L++VRHVP L++NLIS LD G E +++ GS ++
Subjt: DWVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDSLGCEYKGKCGVFQVFMGSKLV
Query: LVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLEALSKQ--------------------------------------DILPQDICS
G L+ E N + + D+WHKR+ H+S+KGL+ L+K+ D++ D+C
Subjt: LVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLEALSKQ--------------------------------------DILPQDICS
Query: KLQ-----------------SKKTKLHQSTTHNKRNPGLHPFGSMGSAST-----------PSLSSSRE-------SGITRHKTVTYTPQQNGVAERLNR
++ S+K ++ T ++ F ++ T +SRE GI KTV TPQ NGVAER+NR
Subjt: KLQ-----------------SKKTKLHQSTTHNKRNPGLHPFGSMGSAST-----------PSLSSSRE-------SGITRHKTVTYTPQQNGVAERLNR
Query: TIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGYA
TI+E+VR +L A L + FW E Y +NRSP L F PE W+ S + LKVFGC +A
Subjt: TIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGYA
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| P92512 Uncharacterized mitochondrial protein AtMg00710 | 5.4e-08 | 36 | Show/hide |
Query: LNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGYADQNKG
+NRTI+E+VR +L L + F + A V+ +N+ P T++ F P+E W + P+ + L+ FGCV Y ++G
Subjt: LNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGYADQNKG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.2e-08 | 35.16 | Show/hide |
Query: ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGY
+ GI+ + +TP+ NG++ER +R I+E LLS+A + + +W A VY +NR P L +P +K P+ + L+VFGC Y
Subjt: ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.7e-09 | 36.26 | Show/hide |
Query: ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGY
+ GI+ + +TP+ NG++ER +R I+E LLS+A + + +W + VY +NR P L +P +K PP+ LKVFGC Y
Subjt: ESGITRHKTVTYTPQQNGVAERLNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT3G21000.1 Gag-Pol-related retrotransposon family protein | 1.7e-04 | 29.49 | Show/hide |
Query: WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDS
W++ +MTP+ +F T + +V + + G G V +++K+G K +RNV VP L N++S G + S
Subjt: WVLDSGCTYHMTPFRAWFNTYREISRESVFMGNNNESNIAGIGTVTMKLKDGTVKLLRNVRHVPHLKINLISLGMLDS
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 1.2e-05 | 29.9 | Show/hide |
Query: GVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLEALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLH
GV +V G + +L G + + L+I++G E+N + E +WH RL+H+SQ+G+E L K+ L S L+ + ++ T + G H
Subjt: GVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLTEADIWHKRLSHISQKGLEALSKQDILPQDICSKLQSKKTKLHQSTTHNKRNPGLH
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 3.8e-09 | 36 | Show/hide |
Query: LNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGYADQNKG
+NRTI+E+VR +L L + F + A V+ +N+ P T++ F P+E W + P+ + L+ FGCV Y ++G
Subjt: LNRTIMERVRCLLSNAILEEKFWVEVAAYVVYTLNRSPHTSLGFLTPEEKWSKHPPSLNDLKVFGCVGYADQNKG
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