; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G15140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G15140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationChr5:15916700..15918124
RNA-Seq ExpressionCSPI05G15140
SyntenyCSPI05G15140
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040609.1 DNA polymerase epsilon catalytic subunit A-like [Cucumis melo var. makuwa]3.9e-12057.96Show/hide
Query:  AVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW-------------------------------------------
        A DAL ++    E H + A  ++D++ +  EV++DEELQ II +LK DPEG     W                                           
Subjt:  AVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW-------------------------------------------

Query:  ------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIK
               W+GMK+DVKKYVE CEVCQR KTE+L+PAGLLQPLP+  LILEDWTMDFIEGLPKAGG +SIMVVVDRLSK+ HF+ LKHPF AKQ+AE  ++
Subjt:  ------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIK

Query:  RVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVF
         ++SKH IP  ++T+RDK+ LS+FWK LFT MGT LKRSTAFHPQTDG+ ERVNR LET+LRCFC EQ  KW+KCI WAELWYNTTFH+ +KTTPFQ V+
Subjt:  RVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVF

Query:  RRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKEVRN
         R PPP++ YG+ K+ NNS ++LL ERDL+I+ALKENL++ QNRMKKQADLH+REL F+V DEVYL LR YRQRSLA+K   N
Subjt:  RRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKEVRN

KAA0066550.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.3e-12659.64Show/hide
Query:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW---------------------------------
        ILYQPGLQNKA DAL R+    E H + A  ++D++ +  EV++DEELQ II +LK DPEG     W                                 
Subjt:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW---------------------------------

Query:  ----------------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI
                         W+GMK+DVKKYVE CEVCQR KTE+L+PAGLLQPLP+  LILEDWTMDFIEGLPKAGG++SIMVVVDRLSK+ HF+ LKHPF 
Subjt:  ----------------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI

Query:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS
        AKQ+AE  ++ ++SKH I   ++T+RDK+ LS+FWK LFT MGT LKRSTAFHPQTDG+ ERVNR LET+LRCFC EQ  KW+KCI WAELWYNTTFH+S
Subjt:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS

Query:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKK
        +KTTPFQ V+ R PPP++ YG+ K+ NNS ++LL ERDL+I+ALKENL++AQNRMKKQADLH++EL F+V DEVYL LR YRQRSLA+K
Subjt:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKK

KAE8637598.1 hypothetical protein CSA_022681 [Cucumis sativus]1.8e-12057.44Show/hide
Query:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW---------------------------------
        ILYQPGLQNK  DAL R  HS+EL+ MT   IVD+E I KEV+ D+ELQKII  LK + +   +  W                                 
Subjt:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW---------------------------------

Query:  ----------------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI
                        FW GMK+D+K+YVE C+ CQR K E+  PAG+LQP+PI + ILEDWTMDFIEGLP AGG+N IMVVVDRLSK  +F+PLKHP+ 
Subjt:  ----------------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI

Query:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS
        AKQ+A + +++VVSKH IP+ +IT+RDKI LSNFWK LFT MGT+LKRSTAFHPQTDG+ ERVNR LET+LRCFC EQ  KW K I WAELWYNTTFH+S
Subjt:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS

Query:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKE
        +KTTP+Q+VF R PPP++SYG +++ NN  + +L ERDL +NAL+ENL +AQNRMKK AD ++REL F++ DEVYL LR YRQRSLA+K+
Subjt:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKE

TYJ98047.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]1.4e-12559.13Show/hide
Query:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW---------------------------------
        ILYQPGLQNKA DAL R+    E H + A  ++D++ +  EV++DEELQ II +LK DPEG     W                                 
Subjt:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW---------------------------------

Query:  ----------------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI
                         W+GMK+DVKKYVE CEVCQR KTE+L+PAGLLQPLP+  LILEDWTMDFI+GLPKAGG+++IMVVVDRLSK+ HF+ LKHPF 
Subjt:  ----------------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI

Query:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS
        AKQ+AE  ++ ++SKH I   ++T+RDK+ LS+FWK LFT MGT LKRSTAFHPQTDG+ ERVNR LET+LRCFC EQ  KW+KCI WAELWYNTTFH+ 
Subjt:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS

Query:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKK
        +KTTPFQ V+ R PPP++ YG+ K+ NNS ++LL ERDL+I+ALKENL++AQNRMKKQADLH+REL F+V DEVYL LR YRQRSLA+K
Subjt:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKK

TYK05651.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.0e-12057.96Show/hide
Query:  AVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW-------------------------------------------
        A DAL ++    E H + A  ++D++ +  EV++DEELQ II +LK DPEG     W                                           
Subjt:  AVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW-------------------------------------------

Query:  ------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIK
               W+GMK+DVKKYVE CEVCQR KTE+L+PAGLLQPLP+  LILEDWTMDFIEGLPKAGG++SIMVVVDRLSK+ HF+ LKHPF AKQ+AE  ++
Subjt:  ------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIK

Query:  RVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVF
         ++SKH IP  ++T+RDK+ LS+FWK LFT MGT LKRSTAFHPQTDG+ ERVNR LET+LRCFC EQ  KW+KCI WAELWYNTTFH+ +KTTPFQ V+
Subjt:  RVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVF

Query:  RRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKEVRN
         R PPP++ YG+ K+ NNS ++LL ERDL+I+ALKENL++ QNRMKKQADLH+REL F+V DEVYL LR YRQRSLA+K   N
Subjt:  RRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKEVRN

TrEMBL top hitse value%identityAlignment
A0A5A7TH70 DNA polymerase epsilon catalytic subunit1.9e-12057.96Show/hide
Query:  AVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW-------------------------------------------
        A DAL ++    E H + A  ++D++ +  EV++DEELQ II +LK DPEG     W                                           
Subjt:  AVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW-------------------------------------------

Query:  ------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIK
               W+GMK+DVKKYVE CEVCQR KTE+L+PAGLLQPLP+  LILEDWTMDFIEGLPKAGG +SIMVVVDRLSK+ HF+ LKHPF AKQ+AE  ++
Subjt:  ------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIK

Query:  RVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVF
         ++SKH IP  ++T+RDK+ LS+FWK LFT MGT LKRSTAFHPQTDG+ ERVNR LET+LRCFC EQ  KW+KCI WAELWYNTTFH+ +KTTPFQ V+
Subjt:  RVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVF

Query:  RRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKEVRN
         R PPP++ YG+ K+ NNS ++LL ERDL+I+ALKENL++ QNRMKKQADLH+REL F+V DEVYL LR YRQRSLA+K   N
Subjt:  RRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKEVRN

A0A5A7VHA7 Ty3/gypsy retrotransposon protein6.1e-12759.64Show/hide
Query:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW---------------------------------
        ILYQPGLQNKA DAL R+    E H + A  ++D++ +  EV++DEELQ II +LK DPEG     W                                 
Subjt:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW---------------------------------

Query:  ----------------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI
                         W+GMK+DVKKYVE CEVCQR KTE+L+PAGLLQPLP+  LILEDWTMDFIEGLPKAGG++SIMVVVDRLSK+ HF+ LKHPF 
Subjt:  ----------------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI

Query:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS
        AKQ+AE  ++ ++SKH I   ++T+RDK+ LS+FWK LFT MGT LKRSTAFHPQTDG+ ERVNR LET+LRCFC EQ  KW+KCI WAELWYNTTFH+S
Subjt:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS

Query:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKK
        +KTTPFQ V+ R PPP++ YG+ K+ NNS ++LL ERDL+I+ALKENL++AQNRMKKQADLH++EL F+V DEVYL LR YRQRSLA+K
Subjt:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKK

A0A5D3BFZ9 Transposon Tf2-6 polyprotein6.7e-12659.13Show/hide
Query:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW---------------------------------
        ILYQPGLQNKA DAL R+    E H + A  ++D++ +  EV++DEELQ II +LK DPEG     W                                 
Subjt:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW---------------------------------

Query:  ----------------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI
                         W+GMK+DVKKYVE CEVCQR KTE+L+PAGLLQPLP+  LILEDWTMDFI+GLPKAGG+++IMVVVDRLSK+ HF+ LKHPF 
Subjt:  ----------------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI

Query:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS
        AKQ+AE  ++ ++SKH I   ++T+RDK+ LS+FWK LFT MGT LKRSTAFHPQTDG+ ERVNR LET+LRCFC EQ  KW+KCI WAELWYNTTFH+ 
Subjt:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS

Query:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKK
        +KTTPFQ V+ R PPP++ YG+ K+ NNS ++LL ERDL+I+ALKENL++AQNRMKKQADLH+REL F+V DEVYL LR YRQRSLA+K
Subjt:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKK

A0A5D3C142 Retrotransposable element Tf25.0e-12157.96Show/hide
Query:  AVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW-------------------------------------------
        A DAL ++    E H + A  ++D++ +  EV++DEELQ II +LK DPEG     W                                           
Subjt:  AVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDPEGNPRTFW-------------------------------------------

Query:  ------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIK
               W+GMK+DVKKYVE CEVCQR KTE+L+PAGLLQPLP+  LILEDWTMDFIEGLPKAGG++SIMVVVDRLSK+ HF+ LKHPF AKQ+AE  ++
Subjt:  ------FWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIK

Query:  RVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVF
         ++SKH IP  ++T+RDK+ LS+FWK LFT MGT LKRSTAFHPQTDG+ ERVNR LET+LRCFC EQ  KW+KCI WAELWYNTTFH+ +KTTPFQ V+
Subjt:  RVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVF

Query:  RRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKEVRN
         R PPP++ YG+ K+ NNS ++LL ERDL+I+ALKENL++ QNRMKKQADLH+REL F+V DEVYL LR YRQRSLA+K   N
Subjt:  RRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKEVRN

A0A5D3E325 Ty3/gypsy retrotransposon protein4.0e-11857.84Show/hide
Query:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDP-----------------------------------------
        ILYQPGLQNKA DAL R+ HSIEL  ++   IVD+E + KEV++DEELQ +I  L+ +P                                         
Subjt:  ILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVETIMKEVDEDEELQKIIVVLKLDP-----------------------------------------

Query:  --EGNPRTF------WFWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI
           G  RT+       FW GMK D+KKYVE CE+CQR K+E+  PAG+LQPLPI + ILEDWTMDFIEGLPKAGG N IMVVVDRLSK  +FV +KHPF 
Subjt:  --EGNPRTF------WFWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFI

Query:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS
        AKQ+A   I ++V +H IP+ +I++RDKI +SNFWK LF  M T+LKRSTAFHPQTDG+ ERVN+ LET+LRCFC EQ  KW++ I WAELWYNTTFHSS
Subjt:  AKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSS

Query:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKK
        ++TTPFQ V+ R PPP+ISYG++KT N+  + LL ERDL I+ALKENL +AQNRMKK AD  +REL F+V DEVYL LR YRQRSLA+K
Subjt:  SKTTPFQAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKK

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.5e-3734.14Show/hide
Query:  WVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIKRVVSKHR
        W G++  +++YV++C  CQ  K+ +  P G LQP+P  E   E  +MDFI  LP++ G+N++ VVVDR SK+   VP      A+Q A +  +RV++   
Subjt:  WVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIKRVVSKHR

Query:  IPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVFRRFPPPI
         P+ +I + D I  S  WK        V+K S  + PQTDG+ ER N+++E  LRC C      W   I   +  YN   HS+++ TPF+ V R    P 
Subjt:  IPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVFRRFPPPI

Query:  ISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQREL
        +S  E  + ++  D+   E   +   +KE+L     +MKK  D+  +E+
Subjt:  ISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQREL

P0CT35 Transposon Tf2-2 polyprotein1.5e-3734.14Show/hide
Query:  WVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIKRVVSKHR
        W G++  +++YV++C  CQ  K+ +  P G LQP+P  E   E  +MDFI  LP++ G+N++ VVVDR SK+   VP      A+Q A +  +RV++   
Subjt:  WVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIKRVVSKHR

Query:  IPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVFRRFPPPI
         P+ +I + D I  S  WK        V+K S  + PQTDG+ ER N+++E  LRC C      W   I   +  YN   HS+++ TPF+ V R    P 
Subjt:  IPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVFRRFPPPI

Query:  ISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQREL
        +S  E  + ++  D+   E   +   +KE+L     +MKK  D+  +E+
Subjt:  ISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQREL

P0CT36 Transposon Tf2-3 polyprotein1.5e-3734.14Show/hide
Query:  WVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIKRVVSKHR
        W G++  +++YV++C  CQ  K+ +  P G LQP+P  E   E  +MDFI  LP++ G+N++ VVVDR SK+   VP      A+Q A +  +RV++   
Subjt:  WVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIKRVVSKHR

Query:  IPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVFRRFPPPI
         P+ +I + D I  S  WK        V+K S  + PQTDG+ ER N+++E  LRC C      W   I   +  YN   HS+++ TPF+ V R    P 
Subjt:  IPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVFRRFPPPI

Query:  ISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQREL
        +S  E  + ++  D+   E   +   +KE+L     +MKK  D+  +E+
Subjt:  ISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQREL

P0CT41 Transposon Tf2-12 polyprotein1.5e-3734.14Show/hide
Query:  WVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIKRVVSKHR
        W G++  +++YV++C  CQ  K+ +  P G LQP+P  E   E  +MDFI  LP++ G+N++ VVVDR SK+   VP      A+Q A +  +RV++   
Subjt:  WVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIKRVVSKHR

Query:  IPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVFRRFPPPI
         P+ +I + D I  S  WK        V+K S  + PQTDG+ ER N+++E  LRC C      W   I   +  YN   HS+++ TPF+ V R    P 
Subjt:  IPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVFRRFPPPI

Query:  ISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQREL
        +S  E  + ++  D+   E   +   +KE+L     +MKK  D+  +E+
Subjt:  ISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQREL

Q9UR07 Transposon Tf2-11 polyprotein1.5e-3734.14Show/hide
Query:  WVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIKRVVSKHR
        W G++  +++YV++C  CQ  K+ +  P G LQP+P  E   E  +MDFI  LP++ G+N++ VVVDR SK+   VP      A+Q A +  +RV++   
Subjt:  WVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLKHPFIAKQMAEVVIKRVVSKHR

Query:  IPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVFRRFPPPI
         P+ +I + D I  S  WK        V+K S  + PQTDG+ ER N+++E  LRC C      W   I   +  YN   HS+++ TPF+ V R    P 
Subjt:  IPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPFQAVFRRFPPPI

Query:  ISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQREL
        +S  E  + ++  D+   E   +   +KE+L     +MKK  D+  +E+
Subjt:  ISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQREL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGAGTAGCTCATCTATCTTATAAGAAGTGTGAGTCTCCTTGGTTTTTTCAATATGTGACTCTTAACATTTCAACAGGAACTCATGGTAGTGGTTTTATCAGTGC
AGAAGTGGAGGCACTATCTATTGGGAAGGAAATTTACACTAATCTCTTATCAGAAGGCACCCAAATTCCTAATAGAAAAACAGAAAGTGCAACCCTCATACTAGAAATGA
TATTGTACCAACCCGGACTTCAAAACAAAGCAGTCGATGCATTATATCGAATTCCCCATTCGATTGAACTCCATGTAATGACGGCTCCAGAAATCGTGGATGTGGAAACA
ATAATGAAAGAAGTTGACGAGGACGAGGAACTACAGAAAATCATAGTTGTACTTAAGTTAGATCCGGAGGGAAACCCAAGGACATTCTGGTTTTGGGTGGGGATGAAATC
AGATGTAAAAAAGTATGTTGAGAGCTGTGAGGTTTGTCAAAGGACCAAAACTGAATCTCTTTCACCAGCTGGATTACTTCAACCCCTACCCATACTGGAATTGATTTTAG
AAGATTGGACCATGGACTTCATAGAGGGCCTACCCAAGGCCGGGGGTTTTAACTCTATCATGGTGGTGGTGGATAGGTTGAGTAAGATTGGCCATTTCGTCCCTCTCAAG
CATCCTTTTATAGCTAAACAAATGGCAGAGGTAGTCATCAAAAGGGTTGTGAGTAAACACAGGATACCAGAATTACTCATTACCAATAGGGATAAAATAATTTTGAGTAA
CTTTTGGAAGGCTTTGTTCACGGGAATGGGGACTGTGTTGAAGAGAAGCACCGCATTTCATCCACAAACCGACGGGAAAGCCGAACGAGTTAATAGATCTTTGGAAACTT
TTCTGAGGTGTTTTTGCATTGAACAACTAGGAAAATGGTACAAGTGTATTCTGTGGGCAGAACTTTGGTACAACACCACTTTTCATAGTTCCTCAAAAACAACACCATTC
CAAGCTGTCTTTAGGAGATTTCCACCACCGATCATCTCATATGGAGAGAGGAAAACAGTGAATAACAGTGCTGATAAATTGTTGATGGAGAGAGATTTAATAATCAATGC
ATTGAAAGAAAACTTGGTAGTGGCTCAGAATAGGATGAAAAAGCAAGCTGATTTACATCAGAGAGAACTTATTTTCCAAGTAGAGGATGAAGTATACTTGAATTTAAGGC
AGTATAGACAGAGATCTTTAGCAAAAAAAGAAGTGAGAAACTTTCACCTAAATTCTATGGACCTTACCGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGAGTAGCTCATCTATCTTATAAGAAGTGTGAGTCTCCTTGGTTTTTTCAATATGTGACTCTTAACATTTCAACAGGAACTCATGGTAGTGGTTTTATCAGTGC
AGAAGTGGAGGCACTATCTATTGGGAAGGAAATTTACACTAATCTCTTATCAGAAGGCACCCAAATTCCTAATAGAAAAACAGAAAGTGCAACCCTCATACTAGAAATGA
TATTGTACCAACCCGGACTTCAAAACAAAGCAGTCGATGCATTATATCGAATTCCCCATTCGATTGAACTCCATGTAATGACGGCTCCAGAAATCGTGGATGTGGAAACA
ATAATGAAAGAAGTTGACGAGGACGAGGAACTACAGAAAATCATAGTTGTACTTAAGTTAGATCCGGAGGGAAACCCAAGGACATTCTGGTTTTGGGTGGGGATGAAATC
AGATGTAAAAAAGTATGTTGAGAGCTGTGAGGTTTGTCAAAGGACCAAAACTGAATCTCTTTCACCAGCTGGATTACTTCAACCCCTACCCATACTGGAATTGATTTTAG
AAGATTGGACCATGGACTTCATAGAGGGCCTACCCAAGGCCGGGGGTTTTAACTCTATCATGGTGGTGGTGGATAGGTTGAGTAAGATTGGCCATTTCGTCCCTCTCAAG
CATCCTTTTATAGCTAAACAAATGGCAGAGGTAGTCATCAAAAGGGTTGTGAGTAAACACAGGATACCAGAATTACTCATTACCAATAGGGATAAAATAATTTTGAGTAA
CTTTTGGAAGGCTTTGTTCACGGGAATGGGGACTGTGTTGAAGAGAAGCACCGCATTTCATCCACAAACCGACGGGAAAGCCGAACGAGTTAATAGATCTTTGGAAACTT
TTCTGAGGTGTTTTTGCATTGAACAACTAGGAAAATGGTACAAGTGTATTCTGTGGGCAGAACTTTGGTACAACACCACTTTTCATAGTTCCTCAAAAACAACACCATTC
CAAGCTGTCTTTAGGAGATTTCCACCACCGATCATCTCATATGGAGAGAGGAAAACAGTGAATAACAGTGCTGATAAATTGTTGATGGAGAGAGATTTAATAATCAATGC
ATTGAAAGAAAACTTGGTAGTGGCTCAGAATAGGATGAAAAAGCAAGCTGATTTACATCAGAGAGAACTTATTTTCCAAGTAGAGGATGAAGTATACTTGAATTTAAGGC
AGTATAGACAGAGATCTTTAGCAAAAAAAGAAGTGAGAAACTTTCACCTAAATTCTATGGACCTTACCGAGTAA
Protein sequenceShow/hide protein sequence
MRGVAHLSYKKCESPWFFQYVTLNISTGTHGSGFISAEVEALSIGKEIYTNLLSEGTQIPNRKTESATLILEMILYQPGLQNKAVDALYRIPHSIELHVMTAPEIVDVET
IMKEVDEDEELQKIIVVLKLDPEGNPRTFWFWVGMKSDVKKYVESCEVCQRTKTESLSPAGLLQPLPILELILEDWTMDFIEGLPKAGGFNSIMVVVDRLSKIGHFVPLK
HPFIAKQMAEVVIKRVVSKHRIPELLITNRDKIILSNFWKALFTGMGTVLKRSTAFHPQTDGKAERVNRSLETFLRCFCIEQLGKWYKCILWAELWYNTTFHSSSKTTPF
QAVFRRFPPPIISYGERKTVNNSADKLLMERDLIINALKENLVVAQNRMKKQADLHQRELIFQVEDEVYLNLRQYRQRSLAKKEVRNFHLNSMDLTE