CuGenDBv2

Gene ID	CSPI05G15270
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transcription repressor KAN1
Genome location	Chr5:16141263..16143281
RNA-Seq Expression	CSPI05G15270
Synteny	CSPI05G15270
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0010158 - abaxial cell fate specification (biological process) GO:0005634 - nucleus (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domains	IPR006447 - Myb domain, plants IPR009057 - Homeobox-like domain superfamily IPR017930 - Myb domain IPR044847 - Transcription repressor KANADI

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8648440.1 hypothetical protein Csa_008163 [Cucumis sativus]

6.5e-34

100

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

XP_011655242.2 probable transcription factor KAN2 isoform X1 [Cucumis sativus]

6.5e-34

100

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

XP_031741144.1 probable transcription factor KAN2 isoform X2 [Cucumis sativus]

3.2e-33

100

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASP
        MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASP
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASP

XP_031741145.1 probable transcription factor KAN2 isoform X3 [Cucumis sativus]

3.2e-33

100

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASP
        MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASP
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASP

XP_038875583.1 transcription repressor KAN1 [Benincasa hispida]

9.4e-33

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        +A+GRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTT+KPAASPG
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTP4 SANT domain-containing protein

6.4e-35

100

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPGN
        MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPGN
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPGN

A0A1S3CJ01 probable transcription factor KAN2

1.0e-32

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        +ARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHK T+KPAASPG
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

A0A6J1CIH2 probable transcription factor KAN2

2.5e-31

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        +ARGR  RAPRMRWT+SLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTT+KPA SPG
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

A0A6J1E434 transcription repressor KAN1-like isoform X3

3.6e-30

93.33

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHK-TTEKPAASP
        MARGR  RAPRMRWTS+LHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHK TT+KPAASP
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHK-TTEKPAASP

A0A6J1E4U1 transcription repressor KAN1-like isoform X1

3.6e-30

93.33

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHK-TTEKPAASP
        MARGR  RAPRMRWTS+LHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHK TT+KPAASP
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHK-TTEKPAASP

SwissProt top hits

e value

%identity

Alignment

Q0J235 Probable transcription factor RL9

7.8e-30

88.73

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Query:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        RSMRAPRMRWTS+LHA+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  K+T+KPAAS G
Subjt:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

Q93WJ9 Transcription repressor KAN1

6.0e-30

89.04

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAAS
        M   RSMRAPRMRWTSSLHA+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  KTT KPAAS
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAAS

Q941I2 Probable transcription factor KAN3

4.7e-27

80.28

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Query:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        R +RAPRMRWT++LHA FVHAV+LLGGHERATPKSVLELMDV+DLTLAHVKSHLQM+R  K+TEKP  S G
Subjt:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

Q9C616 Probable transcription factor KAN2

5.0e-29

87.32

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Query:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        RSMRAPRMRWT++LHA+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  KTT+K AAS G
Subjt:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

Q9FJV5 Probable transcription factor KAN4

8.9e-26

81.69

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Query:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        RS+RAPRMRWTS+LHA FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSHLQM+R  K T+K   SPG
Subjt:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

Arabidopsis top hits

e value

%identity

Alignment

AT1G32240.1 Homeodomain-like superfamily protein

3.6e-30

87.32

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Query:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        RSMRAPRMRWT++LHA+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  KTT+K AAS G
Subjt:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

AT4G17695.1 Homeodomain-like superfamily protein

3.4e-28

80.28

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Query:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        R +RAPRMRWT++LHA FVHAV+LLGGHERATPKSVLELMDV+DLTLAHVKSHLQM+R  K+TEKP  S G
Subjt:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

AT5G16560.1 Homeodomain-like superfamily protein

4.2e-31

89.04

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Query:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAAS
        M   RSMRAPRMRWTSSLHA+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  KTT KPAAS
Subjt:  MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAAS

AT5G42630.1 Homeodomain-like superfamily protein

6.3e-27

81.69

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Query:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        RS+RAPRMRWTS+LHA FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSHLQM+R  K T+K   SPG
Subjt:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

AT5G42630.2 Homeodomain-like superfamily protein

6.3e-27

81.69

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Query:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG
        RS+RAPRMRWTS+LHA FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSHLQM+R  K T+K   SPG
Subjt:  RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPG

Sequences

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CDS sequence

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ATGGCGAGAGGACGATCCATGAGGGCACCGAGAATGCGGTGGACGAGCAGCCTCCATGCTCAGTTTGTTCATGCTGTTGAGCTTCTTGGCGGCCATGAAAGAGCTACGCC
TAAATCAGTTCTAGAGCTCATGGATGTGAAGGATCTAACATTGGCTCACGTCAAAAGCCATTTACAGATGTTTCGGGCACATAAGACGACCGAAAAGCCTGCAGCTTCTC
CAGGTAATTAA

mRNA sequence

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Protein sequence

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MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTEKPAASPGN

CSPI05G15270 (gene) of Cucumber (PI 183967) v1 genome