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CSPI05G15400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G15400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGag-pol polyprotein
Genome locationChr5:16341710..16342502
RNA-Seq ExpressionCSPI05G15400
SyntenyCSPI05G15400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036856.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.1e-3348.86Show/hide
Query:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL
        M LI +  LS+TI +V PFYP+LIR  I +LP++++D SS DY  VH+ G +   SP++IN F+G + +++   +  ST  L SEL+  +L+ WP+  I 
Subjt:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL

Query:  IASLSDKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSD
           LS K+DA  FIYN LLRHV +F VK+ IAL  FFS+LL+HLN  + +  DAP   P+TL+LSY+LFQ SHV D
Subjt:  IASLSDKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSD

KAA0066488.1 uncharacterized protein E6C27_scaffold25G00260 [Cucumis melo var. makuwa]6.6e-3440.23Show/hide
Query:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL
        M  I++ GLS+TI +VGPF+P+LIR  + +LP+D +D S  DYQ VH+ G +   +P+VIN FLG   +++  L+  S   L SEL+ G+L+ WP+  I 
Subjt:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL

Query:  IASLS-------------------------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLS
         A+LS                                     D++DA VFIYN LLRHV +F VK+ IAL  FFS LL+HLN  I + SDAP   P+TLS
Subjt:  IASLS-------------------------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLS

Query:  LSYKLFQRSHVSDGVY-TSQPRHPTNPCATEVSGSSMGPGMASGDISRVLNSLFAEHINLL
        LSY+LFQ +HVSD  +     R P     T    ++ G  +     SR+LN+L AE  +L+
Subjt:  LSYKLFQRSHVSDGVY-TSQPRHPTNPCATEVSGSSMGPGMASGDISRVLNSLFAEHINLL

XP_008456217.1 PREDICTED: uncharacterized protein LOC103496220 [Cucumis melo]4.2e-3643.8Show/hide
Query:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL
        M LI + GLS+TI +VGPFYP+LIR  + +LP+D +D SS +YQ +H+ G +   SP+VIN FLG + +++   +  ST  L  EL+E +L+ WP+  I 
Subjt:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL

Query:  IASLS-------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSDGVYTS
         A+LS                   D++DA  FIYN LLRHV +F VK+ IAL  F S LL+HLN  I + SDAP   P+TLSLSY+LFQ SHV D  +  
Subjt:  IASLS-------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSDGVYTS

Query:  QP-RHPTNPCATEVSGSSMGPGMASGDISRVLNSLFAEHINL
         P R P     T+   ++ G  +     SR+LNSL AE  +L
Subjt:  QP-RHPTNPCATEVSGSSMGPGMASGDISRVLNSLFAEHINL

XP_008460260.1 PREDICTED: uncharacterized protein LOC103499138 [Cucumis melo]5.1e-3442.5Show/hide
Query:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL
        M LI++ GLS+TI +VG FYP+LIR  + +LP+D +D SS DYQ VH+ G +   +P+VIN FLG + +++   +  S   L  EL+ G+L+ WP   I 
Subjt:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL

Query:  IASLS-----------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSDGVYTSQP
          +LS                 D++DA  FIYN LLRHV +F VK+ IAL  FFS LL+HLN  I + SDAP   P+TLSLSY+LFQ  HV D  +   P
Subjt:  IASLS-----------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSDGVYTSQP

Query:  RHPTNPC-ATEVSGSSMGPGMASGDISRVLNSLFAEHINL
           +     T+   ++ G  +     SR+LNSL AE  +L
Subjt:  RHPTNPC-ATEVSGSSMGPGMASGDISRVLNSLFAEHINL

XP_016903164.1 PREDICTED: uncharacterized protein LOC107992057 [Cucumis melo]8.7e-3440.15Show/hide
Query:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL
        M LI + GLS+TI NVGPFYP+LIR  I +LP+D +D SS D+Q +H+ G +   SP+VIN FLG     +   T  S   L   L+ G+L+ WP+  IL
Subjt:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL

Query:  IASLS-------------------------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLS
        + +LS                                     D +D   FIYN LLRHV +F VKI IAL  FFS LL+H N ++  +S+AP   P+TLS
Subjt:  IASLS-------------------------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLS

Query:  LSYKLFQRSHVSDGVYTSQP-RHP----TNPCATEVSGSSMGPGMASGDISRVLNSLFAE------HINLLAVR
        LSY+LFQ SHV D V+   P R P    TN    +V G  +   +A    S+++NSL  E       INLL+ R
Subjt:  LSYKLFQRSHVSDGVYTSQP-RHP----TNPCATEVSGSSMGPGMASGDISRVLNSLFAE------HINLLAVR

TrEMBL top hitse value%identityAlignment
A0A1S3C400 uncharacterized protein LOC1034962202.0e-3643.8Show/hide
Query:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL
        M LI + GLS+TI +VGPFYP+LIR  + +LP+D +D SS +YQ +H+ G +   SP+VIN FLG + +++   +  ST  L  EL+E +L+ WP+  I 
Subjt:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL

Query:  IASLS-------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSDGVYTS
         A+LS                   D++DA  FIYN LLRHV +F VK+ IAL  F S LL+HLN  I + SDAP   P+TLSLSY+LFQ SHV D  +  
Subjt:  IASLS-------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSDGVYTS

Query:  QP-RHPTNPCATEVSGSSMGPGMASGDISRVLNSLFAEHINL
         P R P     T+   ++ G  +     SR+LNSL AE  +L
Subjt:  QP-RHPTNPCATEVSGSSMGPGMASGDISRVLNSLFAEHINL

A0A1S3CC38 uncharacterized protein LOC1034991382.5e-3442.5Show/hide
Query:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL
        M LI++ GLS+TI +VG FYP+LIR  + +LP+D +D SS DYQ VH+ G +   +P+VIN FLG + +++   +  S   L  EL+ G+L+ WP   I 
Subjt:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL

Query:  IASLS-----------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSDGVYTSQP
          +LS                 D++DA  FIYN LLRHV +F VK+ IAL  FFS LL+HLN  I + SDAP   P+TLSLSY+LFQ  HV D  +   P
Subjt:  IASLS-----------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSDGVYTSQP

Query:  RHPTNPC-ATEVSGSSMGPGMASGDISRVLNSLFAEHINL
           +     T+   ++ G  +     SR+LNSL AE  +L
Subjt:  RHPTNPC-ATEVSGSSMGPGMASGDISRVLNSLFAEHINL

A0A1S4E4L2 uncharacterized protein LOC1079920574.2e-3440.15Show/hide
Query:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL
        M LI + GLS+TI NVGPFYP+LIR  I +LP+D +D SS D+Q +H+ G +   SP+VIN FLG     +   T  S   L   L+ G+L+ WP+  IL
Subjt:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL

Query:  IASLS-------------------------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLS
        + +LS                                     D +D   FIYN LLRHV +F VKI IAL  FFS LL+H N ++  +S+AP   P+TLS
Subjt:  IASLS-------------------------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLS

Query:  LSYKLFQRSHVSDGVYTSQP-RHP----TNPCATEVSGSSMGPGMASGDISRVLNSLFAE------HINLLAVR
        LSY+LFQ SHV D V+   P R P    TN    +V G  +   +A    S+++NSL  E       INLL+ R
Subjt:  LSYKLFQRSHVSDGVYTSQP-RHP----TNPCATEVSGSSMGPGMASGDISRVLNSLFAE------HINLLAVR

A0A5A7VFI0 Uncharacterized protein3.2e-3440.23Show/hide
Query:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL
        M  I++ GLS+TI +VGPF+P+LIR  + +LP+D +D S  DYQ VH+ G +   +P+VIN FLG   +++  L+  S   L SEL+ G+L+ WP+  I 
Subjt:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL

Query:  IASLS-------------------------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLS
         A+LS                                     D++DA VFIYN LLRHV +F VK+ IAL  FFS LL+HLN  I + SDAP   P+TLS
Subjt:  IASLS-------------------------------------DKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLS

Query:  LSYKLFQRSHVSDGVY-TSQPRHPTNPCATEVSGSSMGPGMASGDISRVLNSLFAEHINLL
        LSY+LFQ +HVSD  +     R P     T    ++ G  +     SR+LN+L AE  +L+
Subjt:  LSYKLFQRSHVSDGVY-TSQPRHPTNPCATEVSGSSMGPGMASGDISRVLNSLFAEHINLL

A0A5D3B7L1 Gag-pol polyprotein5.5e-3448.86Show/hide
Query:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL
        M LI +  LS+TI +V PFYP+LIR  I +LP++++D SS DY  VH+ G +   SP++IN F+G + +++   +  ST  L SEL+  +L+ WP+  I 
Subjt:  MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSIL

Query:  IASLSDKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSD
           LS K+DA  FIYN LLRHV +F VK+ IAL  FFS+LL+HLN  + +  DAP   P+TL+LSY+LFQ SHV D
Subjt:  IASLSDKIDAEVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGATCAGTCGATTTGGTCTCTCTCGCACAATCTTGAATGTTGGTCCATTCTATCCTAGACTTATTCGGGGAGTCATTGCCAGTCTGCCTTCAGACATTGATGA
TCAGAGTAGCATTGACTATCAATATGTTCATGTGTGCGGTCGTCGGATTGTATTTTCCCCCTCAGTAATCAATGCATTTCTTGGTCTCTTAACAACGTTGGATCCTTATC
TGACCCATCTTTCCACTACAACTTTGACATCTGAATTAACCGAAGGTTCACTTACTATTTGGCCCATGACGAGTATCCTTATTGCCTCCTTAAGTGACAAAATTGATGCT
GAGGTGTTCATATACAACATACTTCTCCGACATGTTGCTACCTTTGTCGTCAAGATTCTGATTGCCTTGCTTTGGTTCTTCTCCAATCTGCTCATCCATTTGAATCCTGA
TATCCCAAGTGACTCTGATGCTCCTCGCCTGTGCCCTCGAACATTGTCACTGAGCTATAAACTGTTTCAACGCTCACATGTGTCAGATGGTGTGTATACTAGTCAGCCTC
GTCACCCAACTAATCCCTGTGCAACTGAAGTTTCTGGCTCTTCTATGGGTCCTGGAATGGCTTCTGGTGATATTTCACGAGTTCTGAACTCATTGTTTGCTGAGCACATC
AATTTACTTGCTGTGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGATCAGTCGATTTGGTCTCTCTCGCACAATCTTGAATGTTGGTCCATTCTATCCTAGACTTATTCGGGGAGTCATTGCCAGTCTGCCTTCAGACATTGATGA
TCAGAGTAGCATTGACTATCAATATGTTCATGTGTGCGGTCGTCGGATTGTATTTTCCCCCTCAGTAATCAATGCATTTCTTGGTCTCTTAACAACGTTGGATCCTTATC
TGACCCATCTTTCCACTACAACTTTGACATCTGAATTAACCGAAGGTTCACTTACTATTTGGCCCATGACGAGTATCCTTATTGCCTCCTTAAGTGACAAAATTGATGCT
GAGGTGTTCATATACAACATACTTCTCCGACATGTTGCTACCTTTGTCGTCAAGATTCTGATTGCCTTGCTTTGGTTCTTCTCCAATCTGCTCATCCATTTGAATCCTGA
TATCCCAAGTGACTCTGATGCTCCTCGCCTGTGCCCTCGAACATTGTCACTGAGCTATAAACTGTTTCAACGCTCACATGTGTCAGATGGTGTGTATACTAGTCAGCCTC
GTCACCCAACTAATCCCTGTGCAACTGAAGTTTCTGGCTCTTCTATGGGTCCTGGAATGGCTTCTGGTGATATTTCACGAGTTCTGAACTCATTGTTTGCTGAGCACATC
AATTTACTTGCTGTGAGATAG
Protein sequenceShow/hide protein sequence
MELISRFGLSRTILNVGPFYPRLIRGVIASLPSDIDDQSSIDYQYVHVCGRRIVFSPSVINAFLGLLTTLDPYLTHLSTTTLTSELTEGSLTIWPMTSILIASLSDKIDA
EVFIYNILLRHVATFVVKILIALLWFFSNLLIHLNPDIPSDSDAPRLCPRTLSLSYKLFQRSHVSDGVYTSQPRHPTNPCATEVSGSSMGPGMASGDISRVLNSLFAEHI
NLLAVR