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CSPI05G15530 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G15530
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein SIS2
Genome locationChr5:16535834..16538079
RNA-Seq ExpressionCSPI05G15530
SyntenyCSPI05G15530
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050184.1 protein SIS2 [Cucumis melo var. makuwa]3.9e-5070.06Show/hide
Query:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------
        MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE        
Subjt:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------

Query:  -----------------------------------LALNQAIMEEDEDY-KDGSEISFEEKPTVPRTRNRPKREAEV
                                           LALNQAIMEEDEDY KDG+EISFEEKPT+PRTRNRPKREAEV
Subjt:  -----------------------------------LALNQAIMEEDEDY-KDGSEISFEEKPTVPRTRNRPKREAEV

XP_004140287.1 uncharacterized protein LOC101209610 [Cucumis sativus]6.8e-6399.25Show/hide
Query:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYKDGSEISFEEKPTVPRTRNRPKREAEV
        EEDEDY+DGSEISFEEKPTVPRTRNRPKREAEV
Subjt:  EEDEDYKDGSEISFEEKPTVPRTRNRPKREAEV

XP_008465810.1 PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo]2.1e-5692.54Show/hide
Query:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDY-KDGSEISFEEKPTVPRTRNRPKREAEV
        EEDEDY KDG+EISFEEKPT+PRTRNRPKREAEV
Subjt:  EEDEDY-KDGSEISFEEKPTVPRTRNRPKREAEV

XP_023525740.1 uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]5.3e-4782.09Show/hide
Query:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYKDG-SEISFEEKPTVPRTRNRPKREAEV
        EEDE+ KDG SEISFEEKP +PRTRNRPKREAEV
Subjt:  EEDEDYKDG-SEISFEEKPTVPRTRNRPKREAEV

XP_038875344.1 uncharacterized protein LOC120067823 [Benincasa hispida]1.9e-4985.82Show/hide
Query:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MA+ LISTRPFPFS+L +APPR FFRPS FSP V F   PS SR LRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYK-DGSEISFEEKPTVPRTRNRPKREAEV
        EEDE+ K DGSEISFEEKP +PRTRNRPKREAEV
Subjt:  EEDEDYK-DGSEISFEEKPTVPRTRNRPKREAEV

TrEMBL top hitse value%identityAlignment
A0A0A0KTR1 Uncharacterized protein3.3e-6399.25Show/hide
Query:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYKDGSEISFEEKPTVPRTRNRPKREAEV
        EEDEDY+DGSEISFEEKPTVPRTRNRPKREAEV
Subjt:  EEDEDYKDGSEISFEEKPTVPRTRNRPKREAEV

A0A1S3CQ37 uncharacterized protein LOC1035034021.0e-5692.54Show/hide
Query:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDY-KDGSEISFEEKPTVPRTRNRPKREAEV
        EEDEDY KDG+EISFEEKPT+PRTRNRPKREAEV
Subjt:  EEDEDY-KDGSEISFEEKPTVPRTRNRPKREAEV

A0A5D3BGL2 Protein SIS21.9e-5070.06Show/hide
Query:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------
        MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE        
Subjt:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------

Query:  -----------------------------------LALNQAIMEEDEDY-KDGSEISFEEKPTVPRTRNRPKREAEV
                                           LALNQAIMEEDEDY KDG+EISFEEKPT+PRTRNRPKREAEV
Subjt:  -----------------------------------LALNQAIMEEDEDY-KDGSEISFEEKPTVPRTRNRPKREAEV

A0A6J1HEK5 uncharacterized protein LOC1114623103.7e-4681.2Show/hide
Query:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYKDG-SEISFEEKPTVPRTRNRPKREAE
        EEDE+ KDG SEI FEEKP +PRTRNRPKREAE
Subjt:  EEDEDYKDG-SEISFEEKPTVPRTRNRPKREAE

A0A6J1JTZ0 uncharacterized protein LOC1114874916.9e-4581.82Show/hide
Query:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPF   PL P R FFRPS  SP VRF  +PS +RTLRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYKDG-SEISFEEKPTVPRTRNRPKREA
        EEDE+ KDG SEISFEEKP +PRTRNRPKREA
Subjt:  EEDEDYKDG-SEISFEEKPTVPRTRNRPKREA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1538.7e-1642.42Show/hide
Query:  FSTLPLAPPRPFFRPS----IFSPPVRFFANPSP-----SRTLR--VVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIME
        F ++P+ P +  F  S    + SPP   F +        +R +R   V TRAG STSSY+ AF+IP +LI  TV T++KI D LD+ FLE++ALNQAI  
Subjt:  FSTLPLAPPRPFFRPS----IFSPPVRFFANPSP-----SRTLR--VVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIME

Query:  EDEDYKDGSEISFE---EKPTVPRTRNRPKRE
         ++      +IS +   ++P + RTRNRPKRE
Subjt:  EDEDYKDGSEISFE---EKPTVPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGGTTCCTTATCTCCACCCGACCCTTTCCCTTTTCCACTCTCCCCCTTGCTCCCCCACGGCCATTCTTCAGACCCTCCATTTTTTCCCCGCCGGTCAGATTCTT
CGCCAACCCATCGCCCTCCAGGACCTTACGAGTCGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCA
CTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACAAAGATGGTTCA
GAAATATCTTTTGAAGAAAAACCAACTGTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAA
mRNA sequenceShow/hide mRNA sequence
AATTGCGTAGATAGTAAGGATTGGGAAGCACTAGCAACCGAAACAACCAAGGAGCCAAGTAATAGCATCGTAGTTTGCTTACATTAATTTTGAAAAATACATAAACTTCA
CATTTGTTTCAAATGGGTAATTGTGAAGAGGTCCATTGAATTGGAGTTGGGCCATCCATTATCATCACACCCATTTACATAACAAACAACTTCAAGCCTTCAACAATGTC
CATTCCAATTCCATACACTTCCAATAGGCAATAGCCATGGCCAGGTTCCTTATCTCCACCCGACCCTTTCCCTTTTCCACTCTCCCCCTTGCTCCCCCACGGCCATTCTT
CAGACCCTCCATTTTTTCCCCGCCGGTCAGATTCTTCGCCAACCCATCGCCCTCCAGGACCTTACGAGTCGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCT
TCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCC
ATCATGGAGGAAGATGAGGATTACAAAGATGGTTCAGAAATATCTTTTGAAGAAAAACCAACTGTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAAAT
AAACTGCTTACTTCTTTTTTAGAGGTGTTTATATGATCGAATCAGGTGGCTAAGAAATGGTTCAAGGAACTAAGAAACTTCCATGTATATTGTATGTAATTTTTCCCCCT
TAATAATGATTAGTTAAAAGTTGGTCGGAATGCTGATTAGCTTAGATATGTAATTATGTTATTGCATATTCTTCAAACTGAAATATCTGTGTAATGGCCTTGATTATGTT
CATCATTCAGTAAAAATATCATTAATGGTTCAAATTCAGTTCTTAAATCTTTAAT
Protein sequenceShow/hide protein sequence
MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYKDGS
EISFEEKPTVPRTRNRPKREAEV