| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033501.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 5.3e-78 | 61.99 | Show/hide |
Query: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAH-----FYKNPTGYCSMSRYGLKQSSR
MN ELNSLYK DT KLVEKPHGK IIP KWVFKKKMIG+LNDK L+A +N ++ ++ + F + P G+ + L
Subjt: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAH-----FYKNPTGYCSMSRYGLKQSSR
Query: YWYKHFDDYISLIGFTKSLYDPCVYYKKLTEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQA
Y ISL +DLGA KKI+GIEILRDRN+NELSLTQK YTNKVLCRFNMA+SKVV TPLAQHIKISARDSPKDPTD+QA
Subjt: YWYKHFDDYISLIGFTKSLYDPCVYYKKLTEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQA
Query: MSYVPYSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKL
MSYVPYSNA +LMYLMVCTRPDL +SSSLVS Y+ NPGKI EATKWVFRYLV T+NRGLLYKPP DSKL
Subjt: MSYVPYSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKL
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| KAA0039651.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 1.6e-90 | 67.66 | Show/hide |
Query: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAHFYKNPTGYCSMSRYGLKQSSRYWYKH
MNDELNSLYKNDTW+LVE PHGK IIP KWVFKKKMIG LNDKVKFKARLVAKGF+Q + V + E + P G+
Subjt: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAHFYKNPTGYCSMSRYGLKQSSRYWYKH
Query: FDDYISLIGFTKSLYDPCVYYKKLTEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVP
K+ DLGAAKKI+GIEILRDRN+NELSLTQK YTNKVLCRFN+A+SKVVSTPLAQHIKISARDSPKDPTD+QAMSYVP
Subjt: FDDYISLIGFTKSLYDPCVYYKKLTEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVP
Query: YSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
YSNAT +LMYLMVCTRPDL +SSSLVSRYMGN GKI EATKWVFRYLV T+NRGLLYK PNDSKL+VR
Subjt: YSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
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| KAA0047818.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.2e-75 | 46.86 | Show/hide |
Query: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSP-------------RCE-------------AH
+ +E+NSL+KN+T + +P KGIIP KWV+KKK +G+ N+KVKFK RLVAKGFKQ +G DY EI SP CE H
Subjt: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSP-------------RCE-------------AH
Query: -------FYKNPTGY---------CSM--SRYGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLT-------------------------------
+ + P G+ C + S YGLKQS R W K FDD+I+ IGF +SLYDPCVYYKKLT
Subjt: -------FYKNPTGY---------CSM--SRYGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLT-------------------------------
Query: ------EDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPDL
+DLG+AK+I+G+EI R R+ L L+QK YT KVL +FNMA++K VSTP+ Q K+SA+DSP + T++QAMS VPYSNA +L++LMVCTR DL
Subjt: ------EDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPDL
Query: TYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
Y+SSLVSRYM N G+ EATKWVFRYLV NRGLLY P++ K+ ++
Subjt: TYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
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| KAA0051442.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.0e-85 | 65.79 | Show/hide |
Query: LVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAHFYKNPTGYCSMSRYGLKQ---SSRYWYKHFDDYISLIGFTK
L +KPHGK IIP KWVFKKKMIGDLNDKVKFKARLVAKGFKQ +GVDYNEI P + + + L+Q ++ + + ++ I + +
Subjt: LVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAHFYKNPTGYCSMSRYGLKQ---SSRYWYKHFDDYISLIGFTK
Query: SLYDPCVYYKKL---------TEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSN
+ K++ +DLGAAKKI+GIEILRDRN+NELSLTQK YTNKVLCRFNMA+SKVVSTPLAQHIKISAR SPKDPTD+QAMSYVPYSN
Subjt: SLYDPCVYYKKL---------TEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSN
Query: ATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
AT +LMYLMVCTRPDL +SSSLVSRYMGNP KI EATKWVF YLV T+NRGLLYKPP DSKL+VR
Subjt: ATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
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| TYK27724.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.2e-75 | 68.58 | Show/hide |
Query: CSMSR--YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLTE-------------------------------------DLGAAKKIIGIEILRDR
C ++R YGLKQS R WYK FDDYISLIGF +SLYDPCVYYKKLTE DLGAAKKI+ +EILRDR
Subjt: CSMSR--YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLTE-------------------------------------DLGAAKKIIGIEILRDR
Query: NSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKW
N+NELSL QK YTNKVLCRFNMA+SK V+TPLAQHIKISARDSPKDPTD+QAMSYV YSNAT +LMYLMVCTRPDL +SSS+V+RYMGNPGKI EATKW
Subjt: NSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKW
Query: VFRYLVETKNRGLLYKPPNDSKLQVR
VFRYLV T+NRGLLYKPP D KL+VR
Subjt: VFRYLVETKNRGLLYKPPNDSKLQVR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SVP7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-78 | 61.99 | Show/hide |
Query: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAH-----FYKNPTGYCSMSRYGLKQSSR
MN ELNSLYK DT KLVEKPHGK IIP KWVFKKKMIG+LNDK L+A +N ++ ++ + F + P G+ + L
Subjt: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAH-----FYKNPTGYCSMSRYGLKQSSR
Query: YWYKHFDDYISLIGFTKSLYDPCVYYKKLTEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQA
Y ISL +DLGA KKI+GIEILRDRN+NELSLTQK YTNKVLCRFNMA+SKVV TPLAQHIKISARDSPKDPTD+QA
Subjt: YWYKHFDDYISLIGFTKSLYDPCVYYKKLTEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQA
Query: MSYVPYSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKL
MSYVPYSNA +LMYLMVCTRPDL +SSSLVS Y+ NPGKI EATKWVFRYLV T+NRGLLYKPP DSKL
Subjt: MSYVPYSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKL
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| A0A5A7TXZ9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.5e-75 | 46.86 | Show/hide |
Query: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSP-------------RCE-------------AH
+ +E+NSL+KN+T + +P KGIIP KWV+KKK +G+ N+KVKFK RLVAKGFKQ +G DY EI SP CE H
Subjt: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSP-------------RCE-------------AH
Query: -------FYKNPTGY---------CSM--SRYGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLT-------------------------------
+ + P G+ C + S YGLKQS R W K FDD+I+ IGF +SLYDPCVYYKKLT
Subjt: -------FYKNPTGY---------CSM--SRYGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLT-------------------------------
Query: ------EDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPDL
+DLG+AK+I+G+EI R R+ L L+QK YT KVL +FNMA++K VSTP+ Q K+SA+DSP + T++QAMS VPYSNA +L++LMVCTR DL
Subjt: ------EDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPDL
Query: TYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
Y+SSLVSRYM N G+ EATKWVFRYLV NRGLLY P++ K+ ++
Subjt: TYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
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| A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.7e-86 | 65.79 | Show/hide |
Query: LVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAHFYKNPTGYCSMSRYGLKQ---SSRYWYKHFDDYISLIGFTK
L +KPHGK IIP KWVFKKKMIGDLNDKVKFKARLVAKGFKQ +GVDYNEI P + + + L+Q ++ + + ++ I + +
Subjt: LVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAHFYKNPTGYCSMSRYGLKQ---SSRYWYKHFDDYISLIGFTK
Query: SLYDPCVYYKKL---------TEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSN
+ K++ +DLGAAKKI+GIEILRDRN+NELSLTQK YTNKVLCRFNMA+SKVVSTPLAQHIKISAR SPKDPTD+QAMSYVPYSN
Subjt: SLYDPCVYYKKL---------TEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSN
Query: ATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
AT +LMYLMVCTRPDL +SSSLVSRYMGNP KI EATKWVF YLV T+NRGLLYKPP DSKL+VR
Subjt: ATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
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| A0A5D3BAM8 Retrotransposon protein, putative, Ty1-copia subclass | 7.7e-91 | 67.66 | Show/hide |
Query: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAHFYKNPTGYCSMSRYGLKQSSRYWYKH
MNDELNSLYKNDTW+LVE PHGK IIP KWVFKKKMIG LNDKVKFKARLVAKGF+Q + V + E + P G+
Subjt: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAHFYKNPTGYCSMSRYGLKQSSRYWYKH
Query: FDDYISLIGFTKSLYDPCVYYKKLTEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVP
K+ DLGAAKKI+GIEILRDRN+NELSLTQK YTNKVLCRFN+A+SKVVSTPLAQHIKISARDSPKDPTD+QAMSYVP
Subjt: FDDYISLIGFTKSLYDPCVYYKKLTEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVP
Query: YSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
YSNAT +LMYLMVCTRPDL +SSSLVSRYMGN GKI EATKWVFRYLV T+NRGLLYK PNDSKL+VR
Subjt: YSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKLQVR
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| A0A5D3DW48 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-75 | 68.58 | Show/hide |
Query: CSMSR--YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLTE-------------------------------------DLGAAKKIIGIEILRDR
C ++R YGLKQS R WYK FDDYISLIGF +SLYDPCVYYKKLTE DLGAAKKI+ +EILRDR
Subjt: CSMSR--YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLTE-------------------------------------DLGAAKKIIGIEILRDR
Query: NSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKW
N+NELSL QK YTNKVLCRFNMA+SK V+TPLAQHIKISARDSPKDPTD+QAMSYV YSNAT +LMYLMVCTRPDL +SSS+V+RYMGNPGKI EATKW
Subjt: NSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKW
Query: VFRYLVETKNRGLLYKPPNDSKLQVR
VFRYLV T+NRGLLYKPP D KL+VR
Subjt: VFRYLVETKNRGLLYKPPNDSKLQVR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.8e-27 | 26.47 | Show/hide |
Query: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAHFYK-----------------------
+N ELN+ N+TW + ++P K I+ +WVF K +L + +++KARLVA+GF Q +DY E +P ++
Subjt: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAHFYK-----------------------
Query: ------------------NPTGYCSMSR--YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYY------------------------------------
N C +++ YGLKQ++R W++ F+ + F S D C+Y
Subjt: ------------------NPTGYCSMSR--YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYY------------------------------------
Query: --KKLTEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPDL
K DL K IGI I + +++ L+Q Y K+L +FNM + VSTPL I +S +D P + LMY+M+CTRPDL
Subjt: --KKLTEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPDL
Query: TYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYK
T + +++SRY + K V RYL T + L++K
Subjt: TYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-52 | 37.27 | Show/hide |
Query: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRC-----------------------------
M +E+ SL KN T+KLVE P GK + KWVFK K GD V++KARLV KGF+Q KG+D++EI SP
Subjt: MNDELNSLYKNDTWKLVEKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRC-----------------------------
Query: -----EAHFYKNPTGY---------CSMSR--YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLTE-----------------------------
E + + P G+ C +++ YGLKQ+ R WY FD ++ + K+ DPCVY+K+ +E
Subjt: -----EAHFYKNPTGY---------CSMSR--YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLTE-----------------------------
Query: --------DLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPD
DLG A++I+G++I+R+R S +L L+Q+ Y +VL RFNM ++K VSTPLA H+K+S + P +K M+ VPYS+A +LMY MVCTRPD
Subjt: --------DLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPKDPTDKQAMSYVPYSNATSNLMYLMVCTRPD
Query: LTYSSSLVSRYMGNPGKIQCEATKWVFRYL
+ ++ +VSR++ NPGK EA KW+ RYL
Subjt: LTYSSSLVSRYMGNPGKIQCEATKWVFRYL
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.3e-10 | 24.2 | Show/hide |
Query: YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLTE------------------------------------DLGAAKKIIGIEILRDRNSNELSLT
YGLKQ+ W +H ++ + IGF + + +Y++ ++ DLG K +G+ I + N +++L+
Subjt: YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKKLTE------------------------------------DLGAAKKIIGIEILRDRNSNELSLT
Query: QKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSP--KDPTDKQAMSYVPYSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLV
+ Y K + + K+ TPL + SP KD T PY + L++ RPD++Y SL+SR++ P I E+ + V RYL
Subjt: QKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSP--KDPTDKQAMSYVPYSNATSNLMYLMVCTRPDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLV
Query: ETKNRGLLYKPPNDSKLQV
T++ L Y+ + L V
Subjt: ETKNRGLLYKPPNDSKLQV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.3e-22 | 27.43 | Show/hide |
Query: MNDELNSLYKNDTWKLVEKPHGK-GIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAH-------------------------
M E+N+ N TW LV P I+ +W+F KK D ++KARLVAKG+ Q G+DY E SP ++
Subjt: MNDELNSLYKNDTWKLVEKPHGK-GIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAH-------------------------
Query: ---------FYKNPTGYCSMSR-----------YGLKQSSRYWYKHFDDYISLIGFTKSL----------------------------YDPCVYYKKL--
+ P G+ R YGLKQ+ R WY +Y+ IGF S+ DP + + L
Subjt: ---------FYKNPTGYCSMSR-----------YGLKQSSRYWYKHFDDYISLIGFTKSL----------------------------YDPCVYYKKL--
Query: ------TEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPK--DPTDKQAMSYVPYSNATSNLMYLMVCTR
+D +GIE R L L+Q+ Y +L R NM ++K V+TP+A K+S K DPT+ Y +L YL TR
Subjt: ------TEDLGAAKKIIGIEILRDRNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPK--DPTDKQAMSYVPYSNATSNLMYLMVCTR
Query: PDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKL
PD++Y+ + +S++M P + +A K + RYL T N G+ K N L
Subjt: PDLTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.9e-22 | 27.3 | Show/hide |
Query: MNDELNSLYKNDTWKLV-EKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAH-------------------------
M E+N+ N TW LV P I+ +W+F KK D ++KARLVAKG+ Q G+DY E SP ++
Subjt: MNDELNSLYKNDTWKLV-EKPHGKGIIPWKWVFKKKMIGDLNDKVKFKARLVAKGFKQNKGVDYNEILSPRCEAH-------------------------
Query: ---------FYKNPTGYCSMSR-----------YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKK------------------------LTEDLGA
+ P G+ R YGLKQ+ R WY Y+ +GF S+ D ++ + L L A
Subjt: ---------FYKNPTGYCSMSR-----------YGLKQSSRYWYKHFDDYISLIGFTKSLYDPCVYYKK------------------------LTEDLGA
Query: AKKIIGIEILRD----------RNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPK--DPTDKQAMSYVPYSNATSNLMYLMVCTRPD
+ ++ D R L L+Q+ YT +L R NM ++K V+TP+A K++ K DPT+ Y +L YL TRPD
Subjt: AKKIIGIEILRD----------RNSNELSLTQKFYTNKVLCRFNMASSKVVSTPLAQHIKISARDSPK--DPTDKQAMSYVPYSNATSNLMYLMVCTRPD
Query: LTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKL
L+Y+ + +S+YM P A K V RYL T + G+ K N L
Subjt: LTYSSSLVSRYMGNPGKIQCEATKWVFRYLVETKNRGLLYKPPNDSKL
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