CuGenDBv2

Gene ID	CSPI05G15700
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Genome location	Chr5:16735269..16742806
RNA-Seq Expression	CSPI05G15700
Synteny	CSPI05G15700
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0016363 - nuclear matrix (cellular component) GO:0032040 - small-subunit processome (cellular component) GO:0034457 - Mpp10 complex (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0030515 - snoRNA binding (molecular function) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	IPR007109 - Brix domain IPR044281 - U3 snoRNP protein/Ribosome production factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579112.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-124

81.02

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELED+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL--ILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISE
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISF     ++E   G +S+ L  I  R +L L       ++    +   +   Y K  K R F+ +
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL--ILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISE

XP_004143747.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucumis sativus]

2.9e-125

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKK MGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL
        RTANILKHLFPVPKPDTKRVVTFANQSDYISF     ++E   G +S+ L
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL

XP_008465711.1 PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Cucumis melo]

1.0e-125

94.4

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL
        RTANILKHLFPVPKPDTKRVVTFANQSDYISF     ++E   G +S+ L
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL

XP_022993779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima]

2.5e-124

81.02

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELED+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL--ILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISE
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISF     ++E   G +S+ L  I  R +L L       ++    +   +   Y K  K R F+ +
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL--ILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISE

XP_038907229.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Benincasa hispida]

1.0e-125

94.4

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL
        RTANILKHLFPVPKPDTKRVVTFANQSDYISF     ++E   G +S+ L
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRT4 Brix domain-containing protein

2.4e-125

99.57

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKK MGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF
        RTANILKHLFPVPKPDTKRVVTFANQSDYISF
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF

A0A1S3CPI1 U3 small nucleolar ribonucleoprotein protein IMP4

4.9e-126

94.4

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL
        RTANILKHLFPVPKPDTKRVVTFANQSDYISF     ++E   G +S+ L
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL

A0A5D3BJ53 U3 small nucleolar ribonucleoprotein IMP4

4.9e-126

94.4

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL
        RTANILKHLFPVPKPDTKRVVTFANQSDYISF     ++E   G +S+ L
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL

A0A6J1FFE4 U3 small nucleolar ribonucleoprotein protein IMP4

1.6e-124

81.02

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELED+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL--ILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISE
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISF     ++E   G +S+ L  I  R +L L       ++    +   +   Y K  K R F+ +
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL--ILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISE

A0A6J1K117 U3 small nucleolar ribonucleoprotein protein IMP4

1.2e-124

81.02

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELED+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL--ILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISE
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISF     ++E   G +S+ L  I  R +L L       ++    +   +   Y K  K R F+ +
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL--ILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISE

SwissProt top hits

e value

%identity

Alignment

Q0VD01 U3 small nucleolar ribonucleoprotein protein IMP4

2.1e-70

57.76

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  ER   E+K K+R ALEE +  PTELR E  AL+  +E +D        H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GT  EA PH+I++ F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF
        R ++IL++LFPVPK D++RV+TFANQ DYISF
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF

Q5PQR5 U3 small nucleolar ribonucleoprotein protein IMP4

4.8e-70

57.33

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE +  PTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF
        R ++IL++LFPVPK D+ RV+TFANQ DYISF
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF

Q5R947 U3 small nucleolar ribonucleoprotein protein IMP4

8.1e-70

57.33

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE +  PTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF
        R ++IL++LFPVPK D+ RV+TFANQ DYISF
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF

Q8VHZ7 U3 small nucleolar ribonucleoprotein protein IMP4

4.8e-70

57.33

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE +  PTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF
        R ++IL++LFPVPK D+ RV+TFANQ DYISF
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF

Q96G21 U3 small nucleolar ribonucleoprotein protein IMP4

8.1e-70

57.33

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE +  PTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF
        R ++IL++LFPVPK D+ RV+TFANQ DYISF
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISF

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

4.0e-104

66.1

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF
        M RR +RL++EY+YRKSLEG ER +YE+KR IREAL+EGKP PTELRN EA LR+EI+LED+ TAVPR+HIDDEYANA+E DPKIL+TTSR+PSAPL +F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE
         KELK VFPN+QR+NRG QVISEIIET R+H+FTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRH+I DKK++G MPE YPH+I NNFTT++G+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL--ILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISE
        R  NILKH+FP PK D KR+VTF+NQSDYISF       +G  G +S+ L  I  R +L L       +E N      +   Y    K R FI E
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFSVGKGLFEGSRGRESLYL--ILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISE

AT4G01560.1 Ribosomal RNA processing Brix domain protein

1.6e-25

35.18

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Query:  RREYLYRKSLEGKERLLYEKKRKIR-------EALEEGKPFPTEL---------RNEEAALRKEIELEDELTAVPRTHIDDEYAN---ASEVDPKILITT
        +R  +Y K    K+    EK++KIR        ALE G+  P ++          ++E   R +   ++EL A     ID +  N     E+ PK+L+TT
Subjt:  RREYLYRKSLEGKERLLYEKKRKIR-------EALEEGKPFPTEL---------RNEEAALRKEIELEDELTAVPRTHIDDEYAN---ASEVDPKILITT

Query:  SRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHI
         R  S        EL  V PN+    RG   + +I+E     +FT +I+VH +R  PD L+I  LP GPTA+F L N+V R +I++    G      P +
Subjt:  SRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHI

Query:  ILNNFTTKLGERTANILKHLFPVPKPD--TKRVVTFANQSDYISFSVGKGLFE
        +LNNFTT+LG R     + LFP P P+   +RVVTF NQ D+I F   + +FE
Subjt:  ILNNFTTKLGERTANILKHLFPVPKPD--TKRVVTFANQSDYISFSVGKGLFE

Sequences

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CDS sequence

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ATGTTGCGAAGAAACATTCGGCTGAGGAGGGAGTATTTGTACAGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTATATGAGAAAAAGCGGAAGATTAGAGAAGCCTTGGA
AGAGGGAAAACCCTTTCCTACTGAACTTCGAAATGAGGAGGCAGCACTTCGTAAAGAAATTGAACTTGAGGATGAACTCACAGCAGTTCCAAGGACACACATTGATGATG
AGTATGCAAATGCTTCAGAAGTTGATCCTAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAACTAAAAATTGTTTTTCCCAAT
GCACAACGAATGAATCGTGGTGGTCAGGTTATCTCAGAGATTATAGAGACCTGCCGTGCTCATGAATTTACAGATGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGA
TGGTTTAATTATCAGCCATCTTCCATTTGGTCCAACTGCCTATTTTGGATTGTTGAATGTGGTTACAAGACATGAAATCAGGGACAAAAAGGCTATGGGAACAATGCCTG
AGGCCTATCCGCACATAATTTTGAACAATTTTACCACGAAGTTGGGTGAAAGGACGGCCAATATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTG
GTTACTTTTGCTAATCAGTCTGACTATATTTCATTCAGTGTGGGTAAGGGACTGTTTGAAGGCAGCCGCGGACGCGAGTCACTCTACCTGATTTTGGGAAGAAGAAAGTT
AAGCTTAGCCATAGACTATTTTCAGGTGCTAGAGAATAACAGAGGTAGATTTGCTATTATTTCACTTGAATATTTTAAAGGTAGAAAATTGAGAATTTTCATTTCGGAAG
GTAGCAGAGGAAGTGGTTGGCGCTCATTAGCAAAGGAGATCTCGGCGTTCCTTCTAGGTGCAAATTTAGGTTCTCAGAAGGCTAGCAATGAATCCCAAATTCAAAGGACT
CAATCAGGAAAGAAAAAGAGGGCTCTTAGGCTTGGATTGTCAAAGGATTTGTGGCTTAGTTTTAGAGGCGAAGGAGTTGATTCGACTCGAGTCATTGCTTCAAAATCAAG
ATTTTTTGTTTCAACTTGGGATTTTCGTGTTATTGAAGGGCAGAGAAAGCAGGAATTTAGGGGAGGTTCAGTCACGGCGTTAGACGTCCCTCCCTTTTTTGAGAACAAAG
GAGATAATCCTTCCCTAGTGTCTTGGTGTGGGGGTCGTGCCATGAGGATGTGTATCCACTGGAGTCCAACTGGGCTTAAGGAAGTGAGTTTCAGGGCGGAGGTCAAAGAA
GATGGTTTTATTTTGGTGGGATGCATTGTCAACCATTGGGACTTCTTCTTTCTGGTGAGATTTCTCGTCGACCTAGGAGAAGAAGAAAAAGAAAGTCAGATTAGGTCAGA
GGATGAAAAAGAAGGAGAAAGAACATCACGTGAAGATTTTGATTCAGTGGAGTGTGATGGGCTGGTGGATAAGAACGCTCACAGGGGATTTGAGAAAGGAAAGGTAAAGC
CCATTGATTTTGTTGAGTTGGGAGGTGGGAAAGATATGTGA

mRNA sequence

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TGGTTGTCAAGTTAGCTGAAACTGTCCTTCCCTCAACGATCGTAAGCCCTTCTTCTTCCCTAAAACCCTATACACCAGCAGCCACTTGAGCCCTGCTCCGCCACTGCACG
CTGTATTCTCAGCCTTCCGCCGTCACTCCCTCTCATACTCTCTCGCCTCCTCGAGCAAACACATCCACTCATCTTTCTTCTCTTTTTCTCCGAAACAGTATTCATCCCCT
AACCCGTGCCGTTGTTGAGATAGCGCTTCCGCCGCTCATTTTTCAGACTCTCGGTTGGGGTTTGGCTAATAGTTCAAAGCAATGTTGCGAAGAAACATTCGGCTGAGGAG
GGAGTATTTGTACAGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTATATGAGAAAAAGCGGAAGATTAGAGAAGCCTTGGAAGAGGGAAAACCCTTTCCTACTGAACTTC
GAAATGAGGAGGCAGCACTTCGTAAAGAAATTGAACTTGAGGATGAACTCACAGCAGTTCCAAGGACACACATTGATGATGAGTATGCAAATGCTTCAGAAGTTGATCCT
AAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAACTAAAAATTGTTTTTCCCAATGCACAACGAATGAATCGTGGTGGTCAGGT
TATCTCAGAGATTATAGAGACCTGCCGTGCTCATGAATTTACAGATGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTATCAGCCATCTTCCATTTG
GTCCAACTGCCTATTTTGGATTGTTGAATGTGGTTACAAGACATGAAATCAGGGACAAAAAGGCTATGGGAACAATGCCTGAGGCCTATCCGCACATAATTTTGAACAAT
TTTACCACGAAGTTGGGTGAAAGGACGGCCAATATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTGGTTACTTTTGCTAATCAGTCTGACTATAT
TTCATTCAGTGTGGGTAAGGGACTGTTTGAAGGCAGCCGCGGACGCGAGTCACTCTACCTGATTTTGGGAAGAAGAAAGTTAAGCTTAGCCATAGACTATTTTCAGGTGC
TAGAGAATAACAGAGGTAGATTTGCTATTATTTCACTTGAATATTTTAAAGGTAGAAAATTGAGAATTTTCATTTCGGAAGGTAGCAGAGGAAGTGGTTGGCGCTCATTA
GCAAAGGAGATCTCGGCGTTCCTTCTAGGTGCAAATTTAGGTTCTCAGAAGGCTAGCAATGAATCCCAAATTCAAAGGACTCAATCAGGAAAGAAAAAGAGGGCTCTTAG
GCTTGGATTGTCAAAGGATTTGTGGCTTAGTTTTAGAGGCGAAGGAGTTGATTCGACTCGAGTCATTGCTTCAAAATCAAGATTTTTTGTTTCAACTTGGGATTTTCGTG
TTATTGAAGGGCAGAGAAAGCAGGAATTTAGGGGAGGTTCAGTCACGGCGTTAGACGTCCCTCCCTTTTTTGAGAACAAAGGAGATAATCCTTCCCTAGTGTCTTGGTGT
GGGGGTCGTGCCATGAGGATGTGTATCCACTGGAGTCCAACTGGGCTTAAGGAAGTGAGTTTCAGGGCGGAGGTCAAAGAAGATGGTTTTATTTTGGTGGGATGCATTGT
CAACCATTGGGACTTCTTCTTTCTGGTGAGATTTCTCGTCGACCTAGGAGAAGAAGAAAAAGAAAGTCAGATTAGGTCAGAGGATGAAAAAGAAGGAGAAAGAACATCAC
GTGAAGATTTTGATTCAGTGGAGTGTGATGGGCTGGTGGATAAGAACGCTCACAGGGGATTTGAGAAAGGAAAGGTAAAGCCCATTGATTTTGTTGAGTTGGGAGGTGGG
AAAGATATGTGA

Protein sequence

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MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPN
AQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV
VTFANQSDYISFSVGKGLFEGSRGRESLYLILGRRKLSLAIDYFQVLENNRGRFAIISLEYFKGRKLRIFISEGSRGSGWRSLAKEISAFLLGANLGSQKASNESQIQRT
QSGKKKRALRLGLSKDLWLSFRGEGVDSTRVIASKSRFFVSTWDFRVIEGQRKQEFRGGSVTALDVPPFFENKGDNPSLVSWCGGRAMRMCIHWSPTGLKEVSFRAEVKE
DGFILVGCIVNHWDFFFLVRFLVDLGEEEKESQIRSEDEKEGERTSREDFDSVECDGLVDKNAHRGFEKGKVKPIDFVELGGGKDM

CSPI05G15700 (gene) of Cucumber (PI 183967) v1 genome