| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU26739.1 hypothetical protein TSUD_317370 [Trifolium subterraneum] | 1.1e-78 | 63.75 | Show/hide |
Query: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
+ + AAL N +VHQMDVKT LNGDLE+EIY +Q GF++ GQE KVCKLDKSL LK KQWHEKFDNL++S GF++NESDKCIYYK + +CTI+CL
Subjt: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
Query: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
YVDD LI GSNL+ VN+VKS+L +FDMKDLGEA+VILGIK T+SE GI LDQS Y+EKILKKY YF+ KP CTPY+ VKL KN DSV Q+EYASII
Subjt: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
Query: ------------------EVYSDADWNFLSDDSNATSGYV
E YSD+DWN LSDDS ATSG++
Subjt: ------------------EVYSDADWNFLSDDSNATSGYV
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| KAA0036533.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 1.1e-76 | 56.94 | Show/hide |
Query: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
+ + LNN L+HQMDVKT LNGDLE+EIY +Q GFIV+ QE KVCKLDKSL LKQ K+WH+KFDNL+MSKGFKVNES+KCIYYK + LC I+CL
Subjt: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
Query: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
YVDD LI GSNL+++NDVKSML A+FDMKDLGEA+VIL IKIT++E GIFLDQS YIEKILKKYNYF+SK TPY+ VKL KN +DSVNQSEYASII
Subjt: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
Query: -----------------------------------------------------------EVYSDADWNFLSDDSNATSGYV
E Y+DADWN LSD+S ATSGY+
Subjt: -----------------------------------------------------------EVYSDADWNFLSDDSNATSGYV
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| KAA0060459.1 hypothetical protein E6C27_scaffold22G002870 [Cucumis melo var. makuwa] | 1.8e-76 | 60.3 | Show/hide |
Query: MDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCLYVDDKLICGSNLNV
MDVKT LNGDLE+EIY +Q GFIV QE KVCKLDKSL LKQ KQWHEKFDNL+MSKGFKVNESDKCIYYK E LC I+CLYVDD LI GSNL+V
Subjt: MDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCLYVDDKLICGSNLNV
Query: VNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII---------------
+NDVKSML +FDMKDLGEA+VILGIKIT++E GIFLDQS YIEK LKKYNYF+SKPTCTPY+ VKL KN DSVNQ+EYASII
Subjt: VNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII---------------
Query: ---------------------------------------------EVYSDADWNFLSDDSNATSGYV
E YSDADWN L DDS ATSGY+
Subjt: ---------------------------------------------EVYSDADWNFLSDDSNATSGYV
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| RZC16339.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja] | 3.7e-77 | 60.64 | Show/hide |
Query: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
+ + A +++ +VHQMDVKT LNG+LE+EIY +Q GF++ GQE KVCKLDKSL LKQ KQWHEKFDNLI+S GFKVNESDKCIYYK N +CTI+C+
Subjt: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
Query: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
YVDD LI GSN++VVN+VKS+LC +FDMKDLGEA+VILGIKIT+S+ GI LDQS YIEKILKKY+YF+ KP TPY+L VKL KN + + Q+EYASII
Subjt: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
Query: ---------------------------EVYSDADWNFLSDDSNATSGYV
E Y+DADWN LSDDS AT+ Y+
Subjt: ---------------------------EVYSDADWNFLSDDSNATSGYV
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| TYK11906.1 putative Polyprotein [Cucumis melo var. makuwa] | 3.3e-78 | 77.39 | Show/hide |
Query: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
+ + AALNN L+HQMDVKT LN DLE+EIY KQ GFIV GQE KVCKLDKSL LKQ SKQWHEKFDNL MSKGFKVNESDKCIYYK E LC I+CL
Subjt: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
Query: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII
YVDD LI GSNL+VVNDVKSM A+ DMKDLGEANVILGIKIT++E GIFLDQS YIEKILKKYNYF+SKP TPY+ VKL KN DSVNQ+EYASII
Subjt: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z6N5E8 Reverse transcriptase Ty1/copia-type domain-containing protein | 5.5e-79 | 63.75 | Show/hide |
Query: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
+ + AAL N +VHQMDVKT LNGDLE+EIY +Q GF++ GQE KVCKLDKSL LK KQWHEKFDNL++S GF++NESDKCIYYK + +CTI+CL
Subjt: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
Query: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
YVDD LI GSNL+ VN+VKS+L +FDMKDLGEA+VILGIK T+SE GI LDQS Y+EKILKKY YF+ KP CTPY+ VKL KN DSV Q+EYASII
Subjt: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
Query: ------------------EVYSDADWNFLSDDSNATSGYV
E YSD+DWN LSDDS ATSG++
Subjt: ------------------EVYSDADWNFLSDDSNATSGYV
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| A0A445KZI1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-77 | 60.64 | Show/hide |
Query: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
+ + A +++ +VHQMDVKT LNG+LE+EIY +Q GF++ GQE KVCKLDKSL LKQ KQWHEKFDNLI+S GFKVNESDKCIYYK N +CTI+C+
Subjt: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
Query: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
YVDD LI GSN++VVN+VKS+LC +FDMKDLGEA+VILGIKIT+S+ GI LDQS YIEKILKKY+YF+ KP TPY+L VKL KN + + Q+EYASII
Subjt: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
Query: ---------------------------EVYSDADWNFLSDDSNATSGYV
E Y+DADWN LSDDS AT+ Y+
Subjt: ---------------------------EVYSDADWNFLSDDSNATSGYV
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| A0A5A7T0X0 Retrotransposon protein, putative, Ty1-copia subclass | 5.2e-77 | 56.94 | Show/hide |
Query: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
+ + LNN L+HQMDVKT LNGDLE+EIY +Q GFIV+ QE KVCKLDKSL LKQ K+WH+KFDNL+MSKGFKVNES+KCIYYK + LC I+CL
Subjt: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
Query: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
YVDD LI GSNL+++NDVKSML A+FDMKDLGEA+VIL IKIT++E GIFLDQS YIEKILKKYNYF+SK TPY+ VKL KN +DSVNQSEYASII
Subjt: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII-
Query: -----------------------------------------------------------EVYSDADWNFLSDDSNATSGYV
E Y+DADWN LSD+S ATSGY+
Subjt: -----------------------------------------------------------EVYSDADWNFLSDDSNATSGYV
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| A0A5D3CNA1 Putative Polyprotein | 1.6e-78 | 77.39 | Show/hide |
Query: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
+ + AALNN L+HQMDVKT LN DLE+EIY KQ GFIV GQE KVCKLDKSL LKQ SKQWHEKFDNL MSKGFKVNESDKCIYYK E LC I+CL
Subjt: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCL
Query: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII
YVDD LI GSNL+VVNDVKSM A+ DMKDLGEANVILGIKIT++E GIFLDQS YIEKILKKYNYF+SKP TPY+ VKL KN DSVNQ+EYASII
Subjt: YVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII
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| A0A5D3D4T4 Reverse transcriptase Ty1/copia-type domain-containing protein | 8.8e-77 | 60.3 | Show/hide |
Query: MDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCLYVDDKLICGSNLNV
MDVKT LNGDLE+EIY +Q GFIV QE KVCKLDKSL LKQ KQWHEKFDNL+MSKGFKVNESDKCIYYK E LC I+CLYVDD LI GSNL+V
Subjt: MDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCLYVDDKLICGSNLNV
Query: VNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII---------------
+NDVKSML +FDMKDLGEA+VILGIKIT++E GIFLDQS YIEK LKKYNYF+SKPTCTPY+ VKL KN DSVNQ+EYASII
Subjt: VNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNITDSVNQSEYASII---------------
Query: ---------------------------------------------EVYSDADWNFLSDDSNATSGYV
E YSDADWN L DDS ATSGY+
Subjt: ---------------------------------------------EVYSDADWNFLSDDSNATSGYV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.2e-23 | 37.28 | Show/hide |
Query: NFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGL--CTILCLYVDDKL
N VHQMDVKT LNG L++EIY + G VCKL+K++ LKQ ++ W E F+ + F + D+CIY + + + LYVDD +
Subjt: NFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGL--CTILCLYVDDKL
Query: ICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTP
I ++ +N+ K L F M DL E +GI+I E I+L QS+Y++KIL K+N TP
Subjt: ICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-35 | 43.39 | Show/hide |
Query: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYK-FENGLCTILC
+ + AA + V Q+DVKT L+GDLE+EIY +Q GF V G++ VCKL+KSL LKQ +QW+ KFD+ + S+ + SD C+Y+K F IL
Subjt: MFATAALNNFLVHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYK-FENGLCTILC
Query: LYVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIG--IFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNI
LYVDD LI G + ++ +K L FDMKDLG A ILG+KI + ++L Q YIE++L+++N +KP TP ++KL K +
Subjt: LYVDDKLICGSNLNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIG--IFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKLLKNI
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| P25600 Putative transposon Ty5-1 protein YCL074W | 6.0e-14 | 32.1 | Show/hide |
Query: MDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCLYVDDKLICGSNLNV
MDV T LN +++ IY KQ GF+ V +L + LKQ W+E +N + GF +E + +Y++ + + +YVDD L+ + +
Subjt: MDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCLYVDDKLICGSNLNV
Query: VNDVKSMLCADFDMKDLGEANVILGIKITQSEIG-IFLDQSSYIEKILKKYNYFESKPTCTP
+ VK L + MKDLG+ + LG+ I QS G I L YI K + K T TP
Subjt: VNDVKSMLCADFDMKDLGEANVILGIKITQSEIG-IFLDQSSYIEKILKKYNYFESKPTCTP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.1e-19 | 31.22 | Show/hide |
Query: VHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCLYVDDKLICGSN
+ Q+DV L G L ++Y Q GFI + + VCKL K+L LKQ + W+ + N +++ GF + SD ++ + +YVDD LI G++
Subjt: VHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCLYVDDKLICGSN
Query: LNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKL-LKNITDSVNQSEYASII
++++ L F +KD E + LGI+ + G+ L Q YI +L + N +KP TP KL L + T + +EY I+
Subjt: LNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKL-LKNITDSVNQSEYASII
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.4e-16 | 28.04 | Show/hide |
Query: VHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCLYVDDKLICGSN
+ Q+DV L G L E+Y Q GF+ + + VC+L K++ LKQ + W+ + +++ GF + SD ++ + +YVDD LI G++
Subjt: VHQMDVKTMLLNGDLEKEIYKKQSGGFIVRGQEFKVCKLDKSLCRLKQPSKQWHEKFDNLIMSKGFKVNESDKCIYYKFENGLCTILCLYVDDKLICGSN
Query: LNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKL-LKNITDSVNQSEYASII
++ L F +K+ + + LGI+ + G+ L Q Y +L + N +KP TP KL L + T + +EY I+
Subjt: LNVVNDVKSMLCADFDMKDLGEANVILGIKITQSEIGIFLDQSSYIEKILKKYNYFESKPTCTPYNLYVKL-LKNITDSVNQSEYASII
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