; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G16540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G16540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReticulon domain-containing protein
Genome locationChr5:17824814..17828113
RNA-Seq ExpressionCSPI05G16540
SyntenyCSPI05G16540
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003388 - Reticulon
IPR044177 - Reticulon-like protein B22/B23


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020756.1 Reticulon-like protein B22 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-7872.29Show/hide
Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVK--------------------------------------------VVVCLYALSVLGRLVSGVTVAYTGLCMLCI
        LANTIGAAESVLRVAATGHDKRLFVK                                            V+V LYALSVLGRLVSGVTVAYTGLCMLCI
Subjt:  LANTIGAAESVLRVAATGHDKRLFVK--------------------------------------------VVVCLYALSVLGRLVSGVTVAYTGLCMLCI

Query:  YMVLENSESISAAISPILRRGNERTSHQDDI
        YMVLENSESISA ISP LRRGN+  SHQD I
Subjt:  YMVLENSESISAAISPILRRGNERTSHQDDI

XP_008465703.1 PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]5.2e-9397.33Show/hide
Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISP LRRGNERTSHQD I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI

XP_011655303.1 reticulon-like protein B22 [Cucumis sativus]2.3e-96100Show/hide
Query:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA
        MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA
Subjt:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA

Query:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
        WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
Subjt:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI

XP_022952032.1 reticulon-like protein B22 isoform X1 [Cucurbita moschata]9.0e-8589.3Show/hide
Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISP LRRGN+  SHQD I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI

XP_038889154.1 reticulon-like protein B22 [Benincasa hispida]1.0e-8891.44Show/hide
Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        MSQIG R EGLR+T+MA+R+INCKTEVGKPFVALICGSL+YYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSM+AW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISP +RRGN+ TSHQD I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI

TrEMBL top hitse value%identityAlignment
A0A0A0KQM7 Reticulon domain-containing protein1.1e-96100Show/hide
Query:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA
        MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA
Subjt:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA

Query:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
        WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
Subjt:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI

A0A1S3CPH6 reticulon-like protein B22 isoform X22.5e-9397.33Show/hide
Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISP LRRGNERTSHQD I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI

A0A6J1D9M0 reticulon-like protein B221.8e-7882.45Show/hide
Query:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA
        MMSQIG R E    ++MA+R+I+  T++GKP VALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMN+SVPVDPLEWQ+SQDTAN ++A
Subjt:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA

Query:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
        WLANTIGAAESVLRVAATGHDKRLF+KVVVCLYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S ++ P  RRGN+ TSHQD I
Subjt:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI

A0A6J1GJ96 reticulon-like protein B22 isoform X14.3e-8589.3Show/hide
Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISP LRRGN+  SHQD I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI

A0A6J1I734 reticulon-like protein B22 isoform X14.3e-8589.3Show/hide
Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISP LRRGN+  SHQD I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI

SwissProt top hitse value%identityAlignment
P0C941 Reticulon-like protein B231.3e-4971.74Show/hide
Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQ+SQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS
        KVV+CLY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS

Q8GWH5 Reticulon-like protein B227.7e-5567.68Show/hide
Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQ+SQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGN----ERTSHQD
        KVV+CLY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+    + +L+RGN    E+ +H D
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGN----ERTSHQD

Arabidopsis top hitse value%identityAlignment
AT1G16825.1 Reticulon family protein9.0e-5171.74Show/hide
Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQ+SQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS
        KVV+CLY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS

AT1G78895.1 Reticulon family protein5.5e-5667.68Show/hide
Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQ+SQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGN----ERTSHQD
        KVV+CLY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+    + +L+RGN    E+ +H D
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGN----ERTSHQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACGCAAATGGCGAGTCGATCAATCAACTGCAAGACAGAAGTTGGCAAACCCTTTGTTGCTCTCATTTG
CGGTTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCT
TCCGCCATATGAATGTCTCGGTTCCAGTAGACCCTCTTGAGTGGCAAGTATCGCAGGATACTGCTAATAGTATGATCGCTTGGTTAGCCAATACCATTGGTGCGGCTGAG
TCTGTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTTGTTAAGGTTGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCGGGTGTTACAGT
TGCCTATACTGGTTTATGTATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTGCTATTTCTCCTATTCTTAGGAGAGGAAATGAACGTACTTCAC
ATCAAGATGATATCTAA
mRNA sequenceShow/hide mRNA sequence
TCTAATTTGATTTGCCATTTTAAGAAAGGGAAGAAAAGAAAAAAAAAAAAAGAAGAAGAAAAGAAAAACTTAAAAATGGCTTACTGTTTTTGAAGGCAACCAAATAAAAT
AAAAAAATGTATACAGGCGCTACTAAAAAATTAAAGCAAAAAAAAGGAGATGAAATTTAGGTGAGGAAAAGATATAGAAAATTAAAGAAAAGAAAAGGTGGAAGGAAAGA
CTGGGCGTTATGGGTTTGACGAATCATAGAGTTTGATATTTGGCGAAGCGTAGAGGGAGCGGAGAATGATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACG
CAAATGGCGAGTCGATCAATCAACTGCAAGACAGAAGTTGGCAAACCCTTTGTTGCTCTCATTTGCGGTTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCT
TCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGGTTCCAGTAGACCCTCTTGAGTGGC
AAGTATCGCAGGATACTGCTAATAGTATGATCGCTTGGTTAGCCAATACCATTGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTT
GTTAAGGTTGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCGGGTGTTACAGTTGCCTATACTGGTTTATGTATGTTGTGTATATACATGGTGTTGGA
GAATTCTGAGTCAATAAGTGCTGCTATTTCTCCTATTCTTAGGAGAGGAAATGAACGTACTTCACATCAAGATGATATCTAATCTTCACTGGCTGTTACCCTGTTTTTCT
TTTCTTTTTTTTACTGTAGATGAATTCATCTGTGTGAATATTATGGTAACAGAATCTGTTTAGGCGGAATGGAGTAATAAATTTATTTGATGGAAATAGAATTTTAGGAG
CCATTGTTGATTACTGATTGACCATTGTGGGTATCTTTTTTTTCTTTTTTTGTGAAGTTGAAGTGAGTTGTTGTATGGTAAAGAAAATATTTGCCAGAACAGTCACTTGG
GTTAATGCAATATTTGTACCAAGAAGGGATGATTAGAAGCAAGTTTGGTTTGATTCTACAATCTCACCTGAATAGGATTTGTTAGGTTATACTTCTACGTCCTTCAATTC
TAAAGTTTGGTTTGGTTTGGTTGTTTGG
Protein sequenceShow/hide protein sequence
MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAE
SVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI