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CSPI05G16610 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G16610
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPectinesterase
Genome locationChr5:17923301..17923651
RNA-Seq ExpressionCSPI05G16610
SyntenyCSPI05G16610
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
GO:0045330 - aspartyl esterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold
IPR018040 - Pectinesterase, Tyr active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649408.1 hypothetical protein Csa_023566, partial [Cucumis sativus]2.1e-3693.26Show/hide
Query:  FNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLSKLQLS
        FN TVSLDGT NF+KINDAIAAAPNFST RFYIHVKPGTY+EIIEVPYEKTCIALIGDD+STTIIVNNRSNGTGSSTASSATLSKLQLS
Subjt:  FNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLSKLQLS

XP_011654361.2 probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus]7.3e-4589.19Show/hide
Query:  MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGT
        MTI TL+M+F++YLLVVVIVEFSDCFSFN TVSLDGT NF+KINDAIAAAPNFST RFYIHVKPGTY+EIIEVPYEKTCIALIGDD+STTIIVNNRSNGT
Subjt:  MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGT

Query:  GSSTASSATLS
        GSSTASSATL+
Subjt:  GSSTASSATLS

XP_031741746.1 probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus]1.7e-3396.25Show/hide
Query:  VSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS
        +SLDGTGNFVKINDAIAAAPNFST RFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL+
Subjt:  VSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS

XP_031745525.1 probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus]7.3e-4589.19Show/hide
Query:  MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGT
        MTI TL+M+F++YLLVVVIVEFSDCFSFN TVSLDGT NF+KINDAIAAAPNFST RFYIHVKPGTY+EIIEVPYEKTCIALIGDD+STTIIVNNRSNGT
Subjt:  MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGT

Query:  GSSTASSATLS
        GSSTASSATL+
Subjt:  GSSTASSATLS

XP_038889244.1 probable pectinesterase/pectinesterase inhibitor 39 [Benincasa hispida]5.1e-3885.05Show/hide
Query:  MLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASS
        M+FIVYLLVVV VEFSDCFSFN TVSLDGTGNFVK+NDAIAAAPNFST RFYIHVK G YKEI+EVP +KT IALIGDDASTTIIVNNRSN TG +TA++
Subjt:  MLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASS

Query:  ATLSKLQ
        ATLSKLQ
Subjt:  ATLSKLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KNI2 Pectinesterase5.1e-5298.28Show/hide
Query:  MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGT
        MTISTLKMLFIVYLLVVVIVEFSDCF FNFTVSLDGTGNFVKINDAIAAAPNFST RFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGT
Subjt:  MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGT

Query:  GSSTASSATLSKLQLS
        GSSTASSATLSKLQLS
Subjt:  GSSTASSATLSKLQLS

A0A0A0L1M3 Pectinesterase5.7e-4390.38Show/hide
Query:  MLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASS
        M+F++YLLVVVIVEFSDCFSFN TVSLDGT NF+KINDAIAAAPNFST RFYIHVKPGTY+EIIEVPYEKTCIALIGDD+STTIIVNNRSNGTGSSTASS
Subjt:  MLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASS

Query:  ATLS
        ATL+
Subjt:  ATLS

A0A6J1D863 Pectinesterase7.7e-3275.47Show/hide
Query:  MLFIVYLLVVV--IVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTA
        M FIV LLV++   VEFS  F+FN TVSLDG GNF ++NDAIAAAPNFST+RFYIHVKPGTY E +EVP +KT IALIGDDASTTIIV+NRSNGTG STA
Subjt:  MLFIVYLLVVV--IVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTA

Query:  SSATLS
        +SATL+
Subjt:  SSATLS

A0A6J1G4B3 Pectinesterase2.6e-3277.36Show/hide
Query:  LKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTA
        L MLFIVYLLV     FS C+SF+ TVSLDGTGN+VKI+DAIAAAPN ST RF IHVKPGTYKE+IEVP  KT IALIGDDASTTIIV++RSNGTGS+TA
Subjt:  LKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTA

Query:  SSATLS
        +SATL+
Subjt:  SSATLS

A0A6J1KJG6 Pectinesterase3.8e-3175.47Show/hide
Query:  LKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTA
        L MLFIVYLLV     FS C+SF+ TVSLDGTGN+VKI+DAIAAAPNFST RF I VKPGTY E+IEVP  KT IALIG+DASTTIIV++RSNGTGS+TA
Subjt:  LKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTA

Query:  SSATLS
        +SATL+
Subjt:  SSATLS

SwissProt top hitse value%identityAlignment
O48711 Probable pectinesterase/pectinesterase inhibitor 125.3e-1451.76Show/hide
Query:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS
        S +  V+ DGTGNF  IN+AI+ APN S  R  I+VK G Y E I++P  KT I LIGD +  T I  NRS G G +T  SATL+
Subjt:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS

O81301 Probable pectinesterase/pectinesterase inhibitor 402.2e-1248.78Show/hide
Query:  NFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL
        N  V+ +GTGN+  I +AI+AAPN S  RF I++K G Y E IE+P EKT I  IGD    T+I  NRS   G +   SAT+
Subjt:  NFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL

O81415 Probable pectinesterase/pectinesterase inhibitor 391.8e-1448.81Show/hide
Query:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL
        ++N +V++DGTGNF  INDA+ AAPN S  RF I++K G Y E +E+P +KT I  IGD    T+I  NRS   G ST  + T+
Subjt:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL

Q9LXK7 Probable pectinesterase/pectinesterase inhibitor 321.7e-1247.5Show/hide
Query:  VSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS
        V+ DGTGNF  I+DA+ AAP++ST R+ IHVK G Y E +E+  +K  I ++GD    T+I  NRS   G +T  SAT +
Subjt:  VSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS

Q9SMY7 Probable pectinesterase/pectinesterase inhibitor 442.2e-1244.71Show/hide
Query:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS
        +++ +V+LDGTGNF KI DAI  AP++S+ RF I++K G Y E +E+  +K  I ++GD    T+I  NRS   G +T  SAT +
Subjt:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS

Arabidopsis top hitse value%identityAlignment
AT2G26440.1 Plant invertase/pectin methylesterase inhibitor superfamily3.8e-1551.76Show/hide
Query:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS
        S +  V+ DGTGNF  IN+AI+ APN S  R  I+VK G Y E I++P  KT I LIGD +  T I  NRS G G +T  SATL+
Subjt:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS

AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily1.2e-1347.5Show/hide
Query:  VSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS
        V+ DGTGNF  I+DA+ AAP++ST R+ IHVK G Y E +E+  +K  I ++GD    T+I  NRS   G +T  SAT +
Subjt:  VSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS

AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily1.3e-1548.81Show/hide
Query:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL
        ++N +V++DGTGNF  INDA+ AAPN S  RF I++K G Y E +E+P +KT I  IGD    T+I  NRS   G ST  + T+
Subjt:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL

AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily1.6e-1348.78Show/hide
Query:  NFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL
        N  V+ +GTGN+  I +AI+AAPN S  RF I++K G Y E IE+P EKT I  IGD    T+I  NRS   G +   SAT+
Subjt:  NFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL

AT4G33220.1 pectin methylesterase 441.6e-1344.71Show/hide
Query:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS
        +++ +V+LDGTGNF KI DAI  AP++S+ RF I++K G Y E +E+  +K  I ++GD    T+I  NRS   G +T  SAT +
Subjt:  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATATCCACACTTAAAATGCTCTTTATAGTGTATTTGTTAGTTGTTGTTATTGTTGAGTTTTCTGATTGCTTTAGTTTCAATTTCACAGTGTCTTTAGATGGTAC
AGGAAATTTTGTTAAAATTAACGATGCTATAGCAGCAGCACCCAATTTTAGTACAGCAAGATTTTACATTCATGTAAAACCTGGAACTTACAAGGAGATTATTGAAGTTC
CATATGAGAAAACTTGTATTGCTTTAATTGGAGATGATGCTTCTACTACCATCATCGTTAACAATCGAAGTAATGGCACTGGGTCCTCCACGGCATCTTCTGCGACTCTC
AGTAAGCTTCAACTATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAATATCCACACTTAAAATGCTCTTTATAGTGTATTTGTTAGTTGTTGTTATTGTTGAGTTTTCTGATTGCTTTAGTTTCAATTTCACAGTGTCTTTAGATGGTAC
AGGAAATTTTGTTAAAATTAACGATGCTATAGCAGCAGCACCCAATTTTAGTACAGCAAGATTTTACATTCATGTAAAACCTGGAACTTACAAGGAGATTATTGAAGTTC
CATATGAGAAAACTTGTATTGCTTTAATTGGAGATGATGCTTCTACTACCATCATCGTTAACAATCGAAGTAATGGCACTGGGTCCTCCACGGCATCTTCTGCGACTCTC
AGTAAGCTTCAACTATCCTGA
Protein sequenceShow/hide protein sequence
MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL
SKLQLS