; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G16620 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G16620
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationChr5:17932290..17933140
RNA-Seq ExpressionCSPI05G16620
SyntenyCSPI05G16620
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0007034 - vacuolar transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005768 - endosome (cellular component)
GO:0005852 - eukaryotic translation initiation factor 3 complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034981.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]9.4e-10771.91Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY
        MMTLPVLA+PDFN  FE  TDASG+G+GAVL+Q++RPIAY+SH+LA+RDR KP+YERELMAVV+AVQRW+PYLLG+ FLVKTDQRSLKFLLEQR+IQPQY
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY

Query:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL
         KWI+KLLGY FEVVYKPGLENK ADALSR P +V L  LTAP LID+  IK EV  DE+L+ I+ +L E    +  ++SI+QGML YKDR+ +SKTS L
Subjt:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL

Query:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE
        +PTILHT HD VFGGHSGFLRTYKR+A EL+WEG+K+DVK+YCE+C+ICQ+NK+LALSPA LL  LE
Subjt:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE

KAA0049776.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]8.8e-10570.79Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY
        MMTLPVLA+PDFN+ FE E+DASGFG+GAVL+Q+++P+AY+S  L+ RDR +P+YERELMAVV AVQRWRPYLLG+ F VKTDQRSLKFLLEQRVIQPQY
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY

Query:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL
         +WI+KLLGY FEV+YKPGLENK ADALSR+  +  LNQLTAP L+D+EVI+ EV  D  L+ I+  + E +G E   Y+  QG+L +K R+ LSK S L
Subjt:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL

Query:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE
        IPTI+HTYHDSVFGGHSGFLRTYKRMA EL+W+GMKRDV+KYCEECMICQ+NK+ ALSPAGLL  LE
Subjt:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE

KAA0063300.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-10471.16Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY
        MMTLPVLA+PDFN+ FE E+DASGFG+GAVL+Q +RP+AY+S  L++RDR +P+YEREL+AVV AVQRWRPYLLG+ F VKTDQRSLKFLLEQRVIQPQY
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY

Query:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL
         +WI+KLLGY FEV+YKPGLENK ADALSR+  +  LNQLTAP L+D+EVI+ EV  D  L+ I+  L E +G E  RY+  QG+L +K R+ LSKTS L
Subjt:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL

Query:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE
        IPTI+HTYHDSVFGGHSGFLRTYKRMA EL+W+GMK+DV+KYC+ECMICQ+NK+ ALSPAGLL  LE
Subjt:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE

KAA0066077.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]4.7e-10671.91Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY
        MMTLPVLALPDF++ FE + DASG+ +G VL+QN+RPIA++SHTLA+RDR KP+YERELMAVV+AVQRWRPYLLG+ F+VK DQRSLKFLLEQRVIQPQY
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY

Query:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL
         KWI+KLLGY FEV+YKPGLENK ADALSRVPS VQLNQLT P LID+++I+ EVA D+ LK I+++++E E  E  +Y+++ GML YK R+ ++K+S L
Subjt:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL

Query:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE
        IPTILHTYHDSVF GHSGFLRTYKR+  EL W+GMK DV+KYCEEC +CQRNK+L+LSPAGLLT LE
Subjt:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE

TYK23090.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.0e-10470.41Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY
        MMTLPVLA+PDFN+ FE E+DASGFG+GAVL+Q+++P+AY+S  L+ RDR +P+YERELMAVV AVQRWRPYLLG+ F VKTDQRSLKFLLEQRVIQPQY
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY

Query:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL
         +WI+KLLGY FEV+YKPGLENK ADALSR+  +  LNQLTAP L+D+EVI+ EV  D  L+ I+  + E +G E   Y+  QG+L +K R+ LSK S L
Subjt:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL

Query:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE
        IPTI+HTYHDSVFGGHSGFLRTYKRMA EL+W+GMK+DV+KYCEECMICQ+NK+ ALSPAGLL  LE
Subjt:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE

TrEMBL top hitse value%identityAlignment
A0A5A7U6J3 Ty3/gypsy retrotransposon protein4.3e-10570.79Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY
        MMTLPVLA+PDFN+ FE E+DASGFG+GAVL+Q+++P+AY+S  L+ RDR +P+YERELMAVV AVQRWRPYLLG+ F VKTDQRSLKFLLEQRVIQPQY
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY

Query:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL
         +WI+KLLGY FEV+YKPGLENK ADALSR+  +  LNQLTAP L+D+EVI+ EV  D  L+ I+  + E +G E   Y+  QG+L +K R+ LSK S L
Subjt:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL

Query:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE
        IPTI+HTYHDSVFGGHSGFLRTYKRMA EL+W+GMKRDV+KYCEECMICQ+NK+ ALSPAGLL  LE
Subjt:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE

A0A5A7V7S9 Ty3/gypsy retrotransposon protein7.3e-10571.16Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY
        MMTLPVLA+PDFN+ FE E+DASGFG+GAVL+Q +RP+AY+S  L++RDR +P+YEREL+AVV AVQRWRPYLLG+ F VKTDQRSLKFLLEQRVIQPQY
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY

Query:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL
         +WI+KLLGY FEV+YKPGLENK ADALSR+  +  LNQLTAP L+D+EVI+ EV  D  L+ I+  L E +G E  RY+  QG+L +K R+ LSKTS L
Subjt:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL

Query:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE
        IPTI+HTYHDSVFGGHSGFLRTYKRMA EL+W+GMK+DV+KYC+ECMICQ+NK+ ALSPAGLL  LE
Subjt:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE

A0A5A7VG68 Transposon Tf2-9 polyprotein2.3e-10671.91Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY
        MMTLPVLALPDF++ FE + DASG+ +G VL+QN+RPIA++SHTLA+RDR KP+YERELMAVV+AVQRWRPYLLG+ F+VK DQRSLKFLLEQRVIQPQY
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY

Query:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL
         KWI+KLLGY FEV+YKPGLENK ADALSRVPS VQLNQLT P LID+++I+ EVA D+ LK I+++++E E  E  +Y+++ GML YK R+ ++K+S L
Subjt:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL

Query:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE
        IPTILHTYHDSVF GHSGFLRTYKR+  EL W+GMK DV+KYCEEC +CQRNK+L+LSPAGLLT LE
Subjt:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE

A0A5D3BRN6 Transposon Tf2-9 polyprotein4.6e-10771.91Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY
        MMTLPVLA+PDFN  FE  TDASG+G+GAVL+Q++RPIAY+SH+LA+RDR KP+YERELMAVV+AVQRW+PYLLG+ FLVKTDQRSLKFLLEQR+IQPQY
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY

Query:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL
         KWI+KLLGY FEVVYKPGLENK ADALSR P +V L  LTAP LID+  IK EV  DE+L+ I+ +L E    +  ++SI+QGML YKDR+ +SKTS L
Subjt:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL

Query:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE
        +PTILHT HD VFGGHSGFLRTYKR+A EL+WEG+K+DVK+YCE+C+ICQ+NK+LALSPA LL  LE
Subjt:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE

A0A5D3CXB1 Ty3/gypsy retrotransposon protein9.5e-10570.41Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY
        MMTLPVLA+PDFN+ FE E+DASGFG+GAVL+Q+++P+AY+S  L+ RDR +P+YERELMAVV AVQRWRPYLLG+ F VKTDQRSLKFLLEQRVIQPQY
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQY

Query:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL
         +WI+KLLGY FEV+YKPGLENK ADALSR+  +  LNQLTAP L+D+EVI+ EV  D  L+ I+  + E +G E   Y+  QG+L +K R+ LSK S L
Subjt:  HKWISKLLGYPFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKL

Query:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE
        IPTI+HTYHDSVFGGHSGFLRTYKRMA EL+W+GMK+DV+KYCEECMICQ+NK+ ALSPAGLL  LE
Subjt:  IPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.3e-2228.42Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQ-----RPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLG--KSFLVKTDQRSL--KFLL
        +++ PVL   DF+     ETDAS   +GAVL Q        P+ YYS  ++       + ++E++A++ +++ WR YL    + F + TD R+L  +   
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQ-----RPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLG--KSFLVKTDQRSL--KFLL

Query:  EQRVIQPQYHKWISKLLGYPFEVVYKPGLENKVADALSR-------VPSSVQLNQLTAPKLIDI-----EVIKAEVAHDEKLKNIMQKLSETEGFEEGRY
        E      +  +W   L  + FE+ Y+PG  N +ADALSR       +P   + N +     I I       +  E  +D KL N++   +E +  EE   
Subjt:  EQRVIQPQYHKWISKLLGYPFEVVYKPGLENKVADALSR-------VPSSVQLNQLTAPKLIDI-----EVIKAEVAHDEKLKNIMQKLSETEGFEEGRY

Query:  SIKQGMLM-YKDRMELSKTSKLIPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLL
         +K G+L+  KD++ L   ++L  TI+  YH+     H G       +     W+G+++ +++Y + C  CQ NK+    P G L
Subjt:  SIKQGMLM-YKDRMELSKTSKLIPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLL

P0CT35 Transposon Tf2-2 polyprotein3.3e-2228.42Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQ-----RPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLG--KSFLVKTDQRSL--KFLL
        +++ PVL   DF+     ETDAS   +GAVL Q        P+ YYS  ++       + ++E++A++ +++ WR YL    + F + TD R+L  +   
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQ-----RPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLG--KSFLVKTDQRSL--KFLL

Query:  EQRVIQPQYHKWISKLLGYPFEVVYKPGLENKVADALSR-------VPSSVQLNQLTAPKLIDI-----EVIKAEVAHDEKLKNIMQKLSETEGFEEGRY
        E      +  +W   L  + FE+ Y+PG  N +ADALSR       +P   + N +     I I       +  E  +D KL N++   +E +  EE   
Subjt:  EQRVIQPQYHKWISKLLGYPFEVVYKPGLENKVADALSR-------VPSSVQLNQLTAPKLIDI-----EVIKAEVAHDEKLKNIMQKLSETEGFEEGRY

Query:  SIKQGMLM-YKDRMELSKTSKLIPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLL
         +K G+L+  KD++ L   ++L  TI+  YH+     H G       +     W+G+++ +++Y + C  CQ NK+    P G L
Subjt:  SIKQGMLM-YKDRMELSKTSKLIPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLL

P0CT36 Transposon Tf2-3 polyprotein3.3e-2228.42Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQ-----RPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLG--KSFLVKTDQRSL--KFLL
        +++ PVL   DF+     ETDAS   +GAVL Q        P+ YYS  ++       + ++E++A++ +++ WR YL    + F + TD R+L  +   
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQ-----RPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLG--KSFLVKTDQRSL--KFLL

Query:  EQRVIQPQYHKWISKLLGYPFEVVYKPGLENKVADALSR-------VPSSVQLNQLTAPKLIDI-----EVIKAEVAHDEKLKNIMQKLSETEGFEEGRY
        E      +  +W   L  + FE+ Y+PG  N +ADALSR       +P   + N +     I I       +  E  +D KL N++   +E +  EE   
Subjt:  EQRVIQPQYHKWISKLLGYPFEVVYKPGLENKVADALSR-------VPSSVQLNQLTAPKLIDI-----EVIKAEVAHDEKLKNIMQKLSETEGFEEGRY

Query:  SIKQGMLM-YKDRMELSKTSKLIPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLL
         +K G+L+  KD++ L   ++L  TI+  YH+     H G       +     W+G+++ +++Y + C  CQ NK+    P G L
Subjt:  SIKQGMLM-YKDRMELSKTSKLIPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLL

P0CT41 Transposon Tf2-12 polyprotein3.3e-2228.42Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQ-----RPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLG--KSFLVKTDQRSL--KFLL
        +++ PVL   DF+     ETDAS   +GAVL Q        P+ YYS  ++       + ++E++A++ +++ WR YL    + F + TD R+L  +   
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQ-----RPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLG--KSFLVKTDQRSL--KFLL

Query:  EQRVIQPQYHKWISKLLGYPFEVVYKPGLENKVADALSR-------VPSSVQLNQLTAPKLIDI-----EVIKAEVAHDEKLKNIMQKLSETEGFEEGRY
        E      +  +W   L  + FE+ Y+PG  N +ADALSR       +P   + N +     I I       +  E  +D KL N++   +E +  EE   
Subjt:  EQRVIQPQYHKWISKLLGYPFEVVYKPGLENKVADALSR-------VPSSVQLNQLTAPKLIDI-----EVIKAEVAHDEKLKNIMQKLSETEGFEEGRY

Query:  SIKQGMLM-YKDRMELSKTSKLIPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLL
         +K G+L+  KD++ L   ++L  TI+  YH+     H G       +     W+G+++ +++Y + C  CQ NK+    P G L
Subjt:  SIKQGMLM-YKDRMELSKTSKLIPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLL

Q9UR07 Transposon Tf2-11 polyprotein3.3e-2228.42Show/hide
Query:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQ-----RPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLG--KSFLVKTDQRSL--KFLL
        +++ PVL   DF+     ETDAS   +GAVL Q        P+ YYS  ++       + ++E++A++ +++ WR YL    + F + TD R+L  +   
Subjt:  MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQ-----RPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLG--KSFLVKTDQRSL--KFLL

Query:  EQRVIQPQYHKWISKLLGYPFEVVYKPGLENKVADALSR-------VPSSVQLNQLTAPKLIDI-----EVIKAEVAHDEKLKNIMQKLSETEGFEEGRY
        E      +  +W   L  + FE+ Y+PG  N +ADALSR       +P   + N +     I I       +  E  +D KL N++   +E +  EE   
Subjt:  EQRVIQPQYHKWISKLLGYPFEVVYKPGLENKVADALSR-------VPSSVQLNQLTAPKLIDI-----EVIKAEVAHDEKLKNIMQKLSETEGFEEGRY

Query:  SIKQGMLM-YKDRMELSKTSKLIPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLL
         +K G+L+  KD++ L   ++L  TI+  YH+     H G       +     W+G+++ +++Y + C  CQ NK+    P G L
Subjt:  SIKQGMLM-YKDRMELSKTSKLIPTILHTYHDSVFGGHSGFLRTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACGCTTCCGGTATTAGCTCTGCCTGATTTCAATGTGTCGTTTGAAAAAGAGACTGATGCTTCTGGATTCGGATTGGGGGCTGTATTAATCCAGAACCAACGTCC
AATTGCATATTATAGCCATACATTGGCAGTAAGGGATAGAGTAAAACCCATATACGAGAGAGAGTTAATGGCGGTTGTAATGGCAGTGCAAAGGTGGCGTCCATATTTGT
TGGGGAAGAGTTTTTTAGTCAAAACTGATCAACGCTCTTTGAAGTTTCTACTGGAACAGAGAGTTATACAACCTCAATACCATAAATGGATATCCAAACTTCTGGGATAT
CCCTTCGAGGTGGTGTATAAACCAGGGTTGGAAAATAAAGTCGCAGATGCATTGTCCAGAGTACCATCATCAGTACAATTGAATCAGTTGACAGCTCCTAAGTTGATCGA
TATCGAAGTCATCAAGGCAGAAGTAGCGCACGATGAGAAGTTGAAGAATATTATGCAGAAGCTAAGTGAGACAGAAGGGTTCGAGGAAGGAAGGTATTCAATTAAACAGG
GTATGCTGATGTACAAAGATCGAATGGAGTTATCTAAAACTTCTAAATTGATTCCAACCATCTTACACACTTATCATGACTCGGTTTTTGGAGGCCACTCGGGATTTTTA
AGGACGTATAAAAGGATGGCTGCAGAGTTACATTGGGAAGGAATGAAGCGGGATGTGAAGAAGTATTGCGAAGAGTGCATGATTTGTCAAAGAAATAAAACTTTGGCGTT
ATCACCTGCTGGACTATTAACACTGTTAGAGCAGTGTTTTAAAAAGCGCCCTAAGGCGCGCGCCTAG
mRNA sequenceShow/hide mRNA sequence
GGCTGAAACAAGCCATGATGACGCTTCCGGTATTAGCTCTGCCTGATTTCAATGTGTCGTTTGAAAAAGAGACTGATGCTTCTGGATTCGGATTGGGGGCTGTATTAATC
CAGAACCAACGTCCAATTGCATATTATAGCCATACATTGGCAGTAAGGGATAGAGTAAAACCCATATACGAGAGAGAGTTAATGGCGGTTGTAATGGCAGTGCAAAGGTG
GCGTCCATATTTGTTGGGGAAGAGTTTTTTAGTCAAAACTGATCAACGCTCTTTGAAGTTTCTACTGGAACAGAGAGTTATACAACCTCAATACCATAAATGGATATCCA
AACTTCTGGGATATCCCTTCGAGGTGGTGTATAAACCAGGGTTGGAAAATAAAGTCGCAGATGCATTGTCCAGAGTACCATCATCAGTACAATTGAATCAGTTGACAGCT
CCTAAGTTGATCGATATCGAAGTCATCAAGGCAGAAGTAGCGCACGATGAGAAGTTGAAGAATATTATGCAGAAGCTAAGTGAGACAGAAGGGTTCGAGGAAGGAAGGTA
TTCAATTAAACAGGGTATGCTGATGTACAAAGATCGAATGGAGTTATCTAAAACTTCTAAATTGATTCCAACCATCTTACACACTTATCATGACTCGGTTTTTGGAGGCC
ACTCGGGATTTTTAAGGACGTATAAAAGGATGGCTGCAGAGTTACATTGGGAAGGAATGAAGCGGGATGTGAAGAAGTATTGCGAAGAGTGCATGATTTGTCAAAGAAAT
AAAACTTTGGCGTTATCACCTGCTGGACTATTAACACTGTTAGAGCAGTGTTTTAAAAAGCGCCCTAAGGCGCGCGCCTAG
Protein sequenceShow/hide protein sequence
MMTLPVLALPDFNVSFEKETDASGFGLGAVLIQNQRPIAYYSHTLAVRDRVKPIYERELMAVVMAVQRWRPYLLGKSFLVKTDQRSLKFLLEQRVIQPQYHKWISKLLGY
PFEVVYKPGLENKVADALSRVPSSVQLNQLTAPKLIDIEVIKAEVAHDEKLKNIMQKLSETEGFEEGRYSIKQGMLMYKDRMELSKTSKLIPTILHTYHDSVFGGHSGFL
RTYKRMAAELHWEGMKRDVKKYCEECMICQRNKTLALSPAGLLTLLEQCFKKRPKARA