; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G16950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G16950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLOB domain-containing protein
Genome locationChr5:18274069..18277955
RNA-Seq ExpressionCSPI05G16950
SyntenyCSPI05G16950
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648523.1 hypothetical protein Csa_008698 [Cucumis sativus]7.1e-11784.5Show/hide
Query:  MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNK
        MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNK
Subjt:  MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNK

Query:  VRELHAQLAVAKAEVHKMQQLQHPNFHLIARLPLNRRLHFSWFLSITVSISLGFLSISADFVSDSLPAALSLSLQFLHPPSKSAASNFFDLPDSAGVKAV
        VRELHAQLAVAKAEVHKMQQLQHPN   + R                   SL   S+      +     LSLSLQFLHPPSKSAASNFFDLPDSAGVKAV
Subjt:  VRELHAQLAVAKAEVHKMQQLQHPNFHLIARLPLNRRLHFSWFLSITVSISLGFLSISADFVSDSLPAALSLSLQFLHPPSKSAASNFFDLPDSAGVKAV

Query:  EFRIGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQSGPTERSWAWVISVGADRE
        EFRIGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQSGPTERSWAWVISVGADRE
Subjt:  EFRIGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQSGPTERSWAWVISVGADRE

KAG6578743.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]6.1e-5287.5Show/hide
Query:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH
        PPP  VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL 
Subjt:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH

Query:  AQLAVAKAEVHKMQQLQHPN
        AQLAVAKAEVHKM Q QH N
Subjt:  AQLAVAKAEVHKMQQLQHPN

KAG7016272.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-5287.5Show/hide
Query:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH
        PPP  VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL 
Subjt:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH

Query:  AQLAVAKAEVHKMQQLQHPN
        AQLAVAKAEVHKM Q QH N
Subjt:  AQLAVAKAEVHKMQQLQHPN

XP_022939142.1 LOB domain-containing protein 1-like [Cucurbita moschata]1.2e-5085.83Show/hide
Query:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH
        PPP  VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL 
Subjt:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH

Query:  AQLAVAKAEVHKMQQLQHPN
         QLAVAKAEVHKM   QH N
Subjt:  AQLAVAKAEVHKMQQLQHPN

XP_023551518.1 LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]4.4e-5089.57Show/hide
Query:  VVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAV
        VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE QRADA SSLVYEANARIRDPIYGCTGSIFQLQN+V EL AQLAV
Subjt:  VVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAV

Query:  AKAEVHKMQQLQHPN
        AKAEVHKM Q QH N
Subjt:  AKAEVHKMQQLQHPN

TrEMBL top hitse value%identityAlignment
A0A0A0KU20 LOB domain-containing protein2.3e-6586.99Show/hide
Query:  MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNK
        MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNK
Subjt:  MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNK

Query:  VRELHAQLAVAKAEVHKMQQLQHPNFHLIARLPLNRRLHFSWFLSI
        VRELHAQLAVAKAEVHKMQQLQHPN   + R     + ++  F  +
Subjt:  VRELHAQLAVAKAEVHKMQQLQHPNFHLIARLPLNRRLHFSWFLSI

A0A1D1XNT8 LOB domain-containing protein 15.1e-4473.39Show/hide
Query:  SSSP-PPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKV
        SSSP PP  VVLSPCAACK+LRRRCVDKC+LAPYFPPTDP KF   HR++GA N+IKFLQELPE QRADA SS+VYEANARIRDP+YGC G+IFQL  +V
Subjt:  SSSP-PPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKV

Query:  RELHAQLAVAKAEVHKMQQLQHPN
         EL AQLA A+AE H   + QH N
Subjt:  RELHAQLAVAKAEVHKMQQLQHPN

A0A6J1FFZ7 LOB domain-containing protein 1-like5.6e-5185.83Show/hide
Query:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH
        PPP  VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL 
Subjt:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH

Query:  AQLAVAKAEVHKMQQLQHPN
         QLAVAKAEVHKM   QH N
Subjt:  AQLAVAKAEVHKMQQLQHPN

A0A6J1JZZ3 LOB domain-containing protein 1-like2.2e-4787.16Show/hide
Query:  VVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAV
        VVLSPCAACKILRRRCVD+C+LAPYFPPT+P KFAAVHRI+GA NVIKFLQELP  QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL AQLA+
Subjt:  VVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAV

Query:  AKAEVHKMQ
        AKAEVHKMQ
Subjt:  AKAEVHKMQ

A0A7J0HBZ9 LOB domain-containing protein 118.7e-4472.5Show/hide
Query:  SSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVR
        S+SPPP  VVLSPCAACKILRRRC +KC+LAPYFPPTDP KF   HR++GA N+IKFLQELPE +RADA SS+VYEANAR+RDP+YG  GSIFQLQN+V 
Subjt:  SSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVR

Query:  ELHAQLAVAKAEVHKMQQLQ
        EL AQLA A+A++  MQ  Q
Subjt:  ELHAQLAVAKAEVHKMQQLQ

SwissProt top hitse value%identityAlignment
Q8L5T5 LOB domain-containing protein 156.0e-3455.56Show/hide
Query:  SSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRE
        S PP     ++PCAACK+LRRRC  +C  +PYF P +P KFA+VH+++GA NV K L E+PE QRADAA+SLVYEAN R+RDP+YGC G+I  LQ +V+ 
Subjt:  SSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRE

Query:  LHAQLAVAKAEVHKMQQ
        L A+L   ++E+ K +Q
Subjt:  LHAQLAVAKAEVHKMQQ

Q8LBW3 LOB domain-containing protein 122.2e-3663.96Show/hide
Query:  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKA
        SPCA+CK+LRRRC   CI APYFPP DP KFA VH+++GA NV K LQELP  QRADA +SLV+EANAR+RDP+YGC G+I  LQN+V +L  QLAVA+A
Subjt:  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKA

Query:  EVHKMQQLQHP
        E+  +Q    P
Subjt:  EVHKMQQLQHP

Q9LQR0 LOB domain-containing protein 12.1e-4268.33Show/hide
Query:  SSSPPPC---TVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQN
        SSSPPP     VVLSPCAACKILRRRC ++C+LAPYFPPTDP KF   HR++GA N+IKFLQELPE QR DA +S+VYEA ARIRDP+YGC G+I+ LQ 
Subjt:  SSSPPPC---TVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQN

Query:  KVRELHAQLAVAKAEVHKMQ
        +V EL AQLA A+ E+  MQ
Subjt:  KVRELHAQLAVAKAEVHKMQ

Q9SHE9 LOB domain-containing protein 41.6e-3461.06Show/hide
Query:  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKA
        SPCAACK+LRRRC   C+ +PYFP  +P KFA VHR++GA NV K LQELP  QR DA SS+VYEANAR+RDP+YGC G+I  LQ ++  L AQLA+A+A
Subjt:  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKA

Query:  EVHKMQQLQHPNF
        EV  ++  Q  NF
Subjt:  EVHKMQQLQHPNF

Q9SK08 LOB domain-containing protein 112.3e-4168.42Show/hide
Query:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH
        PP   VVLSPCAACKILRRRC DKC+LAPYFPPTDP KF   HR++GA N+IKFLQELPE QR DA +S+VYEA AR+RDP+YGC G+I+ LQ +V EL 
Subjt:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH

Query:  AQLAVAKAEVHKMQ
        AQLA  + E+  MQ
Subjt:  AQLAVAKAEVHKMQ

Arabidopsis top hitse value%identityAlignment
AT1G07900.1 LOB domain-containing protein 11.5e-4368.33Show/hide
Query:  SSSPPPC---TVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQN
        SSSPPP     VVLSPCAACKILRRRC ++C+LAPYFPPTDP KF   HR++GA N+IKFLQELPE QR DA +S+VYEA ARIRDP+YGC G+I+ LQ 
Subjt:  SSSPPPC---TVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQN

Query:  KVRELHAQLAVAKAEVHKMQ
        +V EL AQLA A+ E+  MQ
Subjt:  KVRELHAQLAVAKAEVHKMQ

AT1G31320.1 LOB domain-containing protein 41.1e-3561.06Show/hide
Query:  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKA
        SPCAACK+LRRRC   C+ +PYFP  +P KFA VHR++GA NV K LQELP  QR DA SS+VYEANAR+RDP+YGC G+I  LQ ++  L AQLA+A+A
Subjt:  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKA

Query:  EVHKMQQLQHPNF
        EV  ++  Q  NF
Subjt:  EVHKMQQLQHPNF

AT2G28500.1 LOB domain-containing protein 111.6e-4268.42Show/hide
Query:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH
        PP   VVLSPCAACKILRRRC DKC+LAPYFPPTDP KF   HR++GA N+IKFLQELPE QR DA +S+VYEA AR+RDP+YGC G+I+ LQ +V EL 
Subjt:  PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELH

Query:  AQLAVAKAEVHKMQ
        AQLA  + E+  MQ
Subjt:  AQLAVAKAEVHKMQ

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein1.6e-3763.96Show/hide
Query:  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKA
        SPCA+CK+LRRRC   CI APYFPP DP KFA VH+++GA NV K LQELP  QRADA +SLV+EANAR+RDP+YGC G+I  LQN+V +L  QLAVA+A
Subjt:  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKA

Query:  EVHKMQQLQHP
        E+  +Q    P
Subjt:  EVHKMQQLQHP

AT2G40470.1 LOB domain-containing protein 154.3e-3555.56Show/hide
Query:  SSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRE
        S PP     ++PCAACK+LRRRC  +C  +PYF P +P KFA+VH+++GA NV K L E+PE QRADAA+SLVYEAN R+RDP+YGC G+I  LQ +V+ 
Subjt:  SSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRE

Query:  LHAQLAVAKAEVHKMQQ
        L A+L   ++E+ K +Q
Subjt:  LHAQLAVAKAEVHKMQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCGTCGTCGCCACCACCGTGTACGGTGGTTCTCAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCC
TCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGAATTGCCAGAGGGTCAGAGAGCGGACGCTGCAAGTA
GTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTG
GCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTCCATCTGATCGCTCGGCTTCCTCTAAATCGGCGTCTCCATTTCTCTTGGTTCCTCTCAATCAC
CGTCTCCATCTCTCTCGGCTTCCTCTCAATCTCCGCTGATTTCGTTTCCGACTCTCTCCCTGCCGCCCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCG
CCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGATTGGTGCTATGAG
TTTAGAATGGAAAGTAATAGGATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAG
AGAG
mRNA sequenceShow/hide mRNA sequence
ATGCAATCGTCGTCGCCACCACCGTGTACGGTGGTTCTCAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCC
TCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGAATTGCCAGAGGGTCAGAGAGCGGACGCTGCAAGTA
GTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTG
GCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTCCATCTGATCGCTCGGCTTCCTCTAAATCGGCGTCTCCATTTCTCTTGGTTCCTCTCAATCAC
CGTCTCCATCTCTCTCGGCTTCCTCTCAATCTCCGCTGATTTCGTTTCCGACTCTCTCCCTGCCGCCCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCG
CCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGATTGGTGCTATGAG
TTTAGAATGGAAAGTAATAGGATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAG
AGAG
Protein sequenceShow/hide protein sequence
MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAV
AKAEVHKMQQLQHPNFHLIARLPLNRRLHFSWFLSITVSISLGFLSISADFVSDSLPAALSLSLQFLHPPSKSAASNFFDLPDSAGVKAVEFRIGLGETHLDGDQDWCYE
FRMESNRILENVDGPWWSQSGPTERSWAWVISVGADRE