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CSPI05G17410 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G17410
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranslation initiation factor IF-2
Genome locationChr5:18654096..18655299
RNA-Seq ExpressionCSPI05G17410
SyntenyCSPI05G17410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TNN26051.1 hypothetical protein EYF80_063813 [Liparis tanakae]9.1e-0551.28Show/hide
Query:  RERRMANGNEQRMENGEWRTNPRMKKTNPQRTENGEWRRTENGEWRTNPLERTQERRRRTHRERRMANDDKQRTKNGEWRTNPRTKKT--NPQRTENGEW
        RERR  N  EQR ENGE RT  R      QRTEN E +RTENGE RT           R H E+R  N ++ RT+NGE RT  R ++T    QRTENGE 
Subjt:  RERRMANGNEQRMENGEWRTNPRMKKTNPQRTENGEWRRTENGEWRTNPLERTQERRRRTHRERRMANDDKQRTKNGEWRTNPRTKKT--NPQRTENGEW

Query:  RRTENGEWRTNPRMKKT
        +RTENGE RT  R ++T
Subjt:  RRTENGEWRTNPRMKKT
TNN43073.1 Translation initiation factor IF-2 [Liparis tanakae]1.1e-0546.4Show/hide
Query:  RERRMANGNEQRMENGEWRTNPRMKKTNPQRTENGEWR------RTENGEWRTNPLERTQERRRRTHRERRMANDDKQRTKNGEWRTNPRTKKTNPQRTE
        R++R  NG E+R EN E RT  R ++T  +R ENGE R      RTENGE RT   E+  E +R+  R+RR    DK RT+N E RT  R ++T  +R E
Subjt:  RERRMANGNEQRMENGEWRTNPRMKKTNPQRTENGEWR------RTENGEWRTNPLERTQERRRRTHRERRMANDDKQRTKNGEWRTNPRTKKTNPQRTE

Query:  NGEWRRTENGEWRTNPRMKKTNPRE
        NGE RRTE  + RT  R ++T  RE
Subjt:  NGEWRRTENGEWRTNPRMKKTNPRE
TrEMBL top hitse value%identityAlignment
A0A4Z2EBC7 Uncharacterized protein4.4e-0551.28Show/hide
Query:  RERRMANGNEQRMENGEWRTNPRMKKTNPQRTENGEWRRTENGEWRTNPLERTQERRRRTHRERRMANDDKQRTKNGEWRTNPRTKKT--NPQRTENGEW
        RERR  N  EQR ENGE RT  R      QRTEN E +RTENGE RT           R H E+R  N ++ RT+NGE RT  R ++T    QRTENGE 
Subjt:  RERRMANGNEQRMENGEWRTNPRMKKTNPQRTENGEWRRTENGEWRTNPLERTQERRRRTHRERRMANDDKQRTKNGEWRTNPRTKKT--NPQRTENGEW

Query:  RRTENGEWRTNPRMKKT
        +RTENGE RT  R ++T
Subjt:  RRTENGEWRTNPRMKKT
A0A4Z2FQJ6 Translation initiation factor IF-25.2e-0646.4Show/hide
Query:  RERRMANGNEQRMENGEWRTNPRMKKTNPQRTENGEWR------RTENGEWRTNPLERTQERRRRTHRERRMANDDKQRTKNGEWRTNPRTKKTNPQRTE
        R++R  NG E+R EN E RT  R ++T  +R ENGE R      RTENGE RT   E+  E +R+  R+RR    DK RT+N E RT  R ++T  +R E
Subjt:  RERRMANGNEQRMENGEWRTNPRMKKTNPQRTENGEWR------RTENGEWRTNPLERTQERRRRTHRERRMANDDKQRTKNGEWRTNPRTKKTNPQRTE

Query:  NGEWRRTENGEWRTNPRMKKTNPRE
        NGE RRTE  + RT  R ++T  RE
Subjt:  NGEWRRTENGEWRTNPRMKKTNPRE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACATAAAAAATCATGAGTTCAAAAATTGTGTAAAAAAAGAGGAGGAAATTTATCCGTGGTTTCGAGAACGGAGAATGGCGAATGGCAATGAACAGAGAATGGAGAA
TGGAGAATGGAGAACGAACCCACGAATGAAGAAGACGAACCCACAGAGAACGGAGAATGGTGAATGGCGACGAACGGAGAATGGAGAATGGAGAACAAACCCACTTGAAC
GAACCCAGGAACGAAGAAGACGAACCCACAGAGAACGAAGAATGGCGAATGACGACAAACAGAGAACGAAGAATGGAGAATGGAGAACGAACCCACGAACGAAGAAGACG
AACCCACAGAGAACGGAGAATGGCGAATGGCGACGAACGGAGAATGGAGAATGGAGAACGAACCCACGAATGAAGAAGACGAACCCACGTGAACTCGTGTAG
mRNA sequenceShow/hide mRNA sequence
AAGAGTTCTTATCACAAATGGTACCAGAAAAAATATTCAGATTGCTTTGAGGATTAAGATTGAGAAACCATCTGAGTTTTTTTTTAAGATTCAACTCCAAAGTTCACCAT
TCCAAGAACTTCACTTGAATTAGCAAGTTAGTGATTGATTTCAACCATGCTATATCTTGTGGATGGTACGATATCATAATTGAGCCAGTAAAATCATGCACATAAAAAAT
CATGAGTTCAAAAATTGTGTAAAAAAAGAGGAGGAAATTTATCCGTGGTTTCGAGAACGGAGAATGGCGAATGGCAATGAACAGAGAATGGAGAATGGAGAATGGAGAAC
GAACCCACGAATGAAGAAGACGAACCCACAGAGAACGGAGAATGGTGAATGGCGACGAACGGAGAATGGAGAATGGAGAACAAACCCACTTGAACGAACCCAGGAACGAA
GAAGACGAACCCACAGAGAACGAAGAATGGCGAATGACGACAAACAGAGAACGAAGAATGGAGAATGGAGAACGAACCCACGAACGAAGAAGACGAACCCACAGAGAACG
GAGAATGGCGAATGGCGACGAACGGAGAATGGAGAATGGAGAACGAACCCACGAATGAAGAAGACGAACCCACGTGAACTCGTGTAGGAGGAAGACAAATGAAGGACTGG
CGAAGGACAAAGATGAAGGACTAGCGTCGAAGACGAAGGAGTGGGAAGTGC
Protein sequenceShow/hide protein sequence
MHIKNHEFKNCVKKEEEIYPWFRERRMANGNEQRMENGEWRTNPRMKKTNPQRTENGEWRRTENGEWRTNPLERTQERRRRTHRERRMANDDKQRTKNGEWRTNPRTKKT
NPQRTENGEWRRTENGEWRTNPRMKKTNPRELV