; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G18030 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G18030
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionpre-rRNA-processing protein ESF2
Genome locationChr5:19139417..19146915
RNA-Seq ExpressionCSPI05G18030
SyntenyCSPI05G18030
Gene Ontology termsGO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0034462 - small-subunit processome assembly (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037601.1 pre-rRNA-processing protein ESF2 [Cucumis melo var. makuwa]1.6e-15793.21Show/hide
Query:  QLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQ
        +LGESN+N+DSDKVKKKKKRKKSTQQR+EES IKDEAGEYENR ETFMKEASPVSNSGSE FFEKR IALEDAENERTD+ILRENSD KILESDNGK ++
Subjt:  QLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQ

Query:  RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGG
        RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEPIGG
Subjt:  RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGG

Query:  RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFP
        RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFP
Subjt:  RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFP

Query:  QTQPVADFAVQNKPRLSTNVLAGV
        QTQPVAD AVQNK RLSTNVLA V
Subjt:  QTQPVADFAVQNKPRLSTNVLAGV

XP_016902333.1 PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo]7.1e-18292.33Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE
        MS EESSEVNL TDC+PES KKRAKSRKNK+KQLL+KGVDVMEMKDV SVQLGESN+N+DSDKVKKKKKRKKSTQQR+EES IKDEAGEYENR ETFMKE
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE

Query:  ASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIY
        ASPVSNSGSE FFEKR IALEDAENERTD+ILRE SD KILESDNGK ++RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQRIY
Subjt:  ASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIY

Query:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
        LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
Subjt:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER

Query:  DFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        D YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQTQPVAD AVQNK RLSTNVLA VFGSS
Subjt:  DFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

XP_022990094.1 pre-rRNA-processing protein ESF2 [Cucurbita maxima]1.3e-15179.21Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE
        M  EES EV+L TDCSPES KK  K  K K+KQLL++GVDVME    GSV+LGESN+N++   VK KKKR+KST+Q V E+ I+ EAGEYE +AE  +KE
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE

Query:  ASPVSNSGSE--IFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR
         SP+S+ GSE     E+R+ ALED ENE  DSI+RE S  KILES+NGK +QR IKRKK+LLKE ANADMRGICYLSRVPPHMDPLKLRQILSQ+GEIQR
Subjt:  ASPVSNSGSE--IFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR

Query:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAA+QV+RKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKR
Subjt:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        ERDFYL+KVDKSRAL SIEERLKKKQK+REDSEMNS L DSQKLPKLIR+FPQTQPVAD AVQ+KP+LSTN LAGVFGSS
Subjt:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

XP_031742023.1 pre-rRNA-processing protein ESF2 [Cucumis sativus]5.8e-20099.21Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKV---KKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
        MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKV   KKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKV---KKKKKRKKSTQQRVEESFIKDEAGEYENRAETF

Query:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR
        MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR
Subjt:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR

Query:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
Subjt:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
Subjt:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

XP_038891142.1 pre-rRNA-processing protein ESF2 [Benincasa hispida]6.6e-17287.3Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE
        MS EES EV+L TDCSP+S KKRAK RKNK KQLL++  D+MEMK+VGSVQLGESN+N DSDKVKKKKKRKKS QQ VEES +KDEAGEYENRAETFMKE
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE

Query:  ASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIY
         S  SN GSE FFEKRKIALEDAENER+ SI+RENS  KILES+NGK +QR IKRKK+LLKE  NADMRGICYLSRVPPHMDPLKLRQILSQ+GEIQRIY
Subjt:  ASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIY

Query:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
        LAPEDAASQVQRKR+GGFRGQFFSEGWVEFTDKRVAK+VAN+LNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
Subjt:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER

Query:  DFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        DFYLAKVDKSRALNSIEERLKKKQK+REDSEM STL DSQKLPKLIRSFPQTQPVAD  VQNK RLSTNVLAGVFGSS
Subjt:  DFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

TrEMBL top hitse value%identityAlignment
A0A0A0KUC2 RRM domain-containing protein2.8e-20099.21Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKV---KKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
        MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKV   KKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKV---KKKKKRKKSTQQRVEESFIKDEAGEYENRAETF

Query:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR
        MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR
Subjt:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR

Query:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
Subjt:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
Subjt:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

A0A1S4E282 pre-rRNA-processing protein ESF23.4e-18292.33Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE
        MS EESSEVNL TDC+PES KKRAKSRKNK+KQLL+KGVDVMEMKDV SVQLGESN+N+DSDKVKKKKKRKKSTQQR+EES IKDEAGEYENR ETFMKE
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE

Query:  ASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIY
        ASPVSNSGSE FFEKR IALEDAENERTD+ILRE SD KILESDNGK ++RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQRIY
Subjt:  ASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIY

Query:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
        LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
Subjt:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER

Query:  DFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        D YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQTQPVAD AVQNK RLSTNVLA VFGSS
Subjt:  DFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

A0A5A7T7P5 Pre-rRNA-processing protein ESF27.7e-15893.21Show/hide
Query:  QLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQ
        +LGESN+N+DSDKVKKKKKRKKSTQQR+EES IKDEAGEYENR ETFMKEASPVSNSGSE FFEKR IALEDAENERTD+ILRENSD KILESDNGK ++
Subjt:  QLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQ

Query:  RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGG
        RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEPIGG
Subjt:  RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGG

Query:  RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFP
        RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFP
Subjt:  RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFP

Query:  QTQPVADFAVQNKPRLSTNVLAGV
        QTQPVAD AVQNK RLSTNVLA V
Subjt:  QTQPVADFAVQNKPRLSTNVLAGV

A0A6J1BYG4 pre-rRNA-processing protein ESF22.0e-15078.1Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE
        M  EE  EVNL TD SPES KKRAK  KNK+KQLL +GVDVM+MK+V SVQ+ ESN+N+D DKVKKKKK KKS +Q VEE+ IK EAGE E++AE+ MKE
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE

Query:  ASPVSNSGSE--IFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRI
          P S+ G E    FEK++I LE AE+ R DSI+RENS  KILES+NGK+ ++IKRKK+LLKE+A A+M GICYLSRVPPHMDPLKLRQILS +GEIQRI
Subjt:  ASPVSNSGSE--IFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRI

Query:  YLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE
        YLAPEDAA+QVQRKRAGGFRGQ FSEGWVEFTDKRVAK+VA MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE
Subjt:  YLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE

Query:  RDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        RDFYL+KVDKSRALNSIEERLKKKQK+REDSEM+S     QKLPKLIR+FPQTQPVAD AV+NK RLS N+LAGVFGSS
Subjt:  RDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

A0A6J1JP68 pre-rRNA-processing protein ESF26.3e-15279.21Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE
        M  EES EV+L TDCSPES KK  K  K K+KQLL++GVDVME    GSV+LGESN+N++   VK KKKR+KST+Q V E+ I+ EAGEYE +AE  +KE
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKE

Query:  ASPVSNSGSE--IFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR
         SP+S+ GSE     E+R+ ALED ENE  DSI+RE S  KILES+NGK +QR IKRKK+LLKE ANADMRGICYLSRVPPHMDPLKLRQILSQ+GEIQR
Subjt:  ASPVSNSGSE--IFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR

Query:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAA+QV+RKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKR
Subjt:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        ERDFYL+KVDKSRAL SIEERLKKKQK+REDSEMNS L DSQKLPKLIR+FPQTQPVAD AVQ+KP+LSTN LAGVFGSS
Subjt:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

SwissProt top hitse value%identityAlignment
O74362 Pre-rRNA-processing protein esf21.4e-3638.26Show/hide
Query:  ENERTDSILRENSDGKILESDNGKNQRKIKR--KKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF
        E+E +D           L+ +  KN   IK+   +++ K+       G+ YLSR+PP+M P KLRQILSQ+G+I R+YL PE +A + QR R GG +   
Subjt:  ENERTDSILRENSDGKILESDNGKNQRKIKR--KKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF

Query:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK
        + EGW+EF  KRVAK VA +LN   IGG+K S ++ D+WN+KYL KFKW  LTE+ A ++A RE +L +EI   +++   Y+  V+ ++ +  I ++  +
Subjt:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK

Query:  KQKMR---EDSEMNSTLDDSQKLPKLIRSF
        +  +    E  E    L +  K  K  R F
Subjt:  KQKMR---EDSEMNSTLDDSQKLPKLIRSF

Q4HZ47 Pre-rRNA-processing protein ESF22.5e-3635.36Show/hide
Query:  EKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKR
        + +K   ED + ++ +   R++ D     S    +  +   KK L+   A     G+ YLSR+PP M P KLR +L  +G I RI+LAPED AS  +R R
Subjt:  EKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKR

Query:  AGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALN
        AGG + + ++EGWVEFT K+ AK V ++LN   IGG+K S ++ DLWN+ YL  FKW +LTE+ A ++A R  ++  EIS + +E   ++  V+K++ L+
Subjt:  AGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALN

Query:  SIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAV--QNKPRLSTNVLAGVF
         +  + K K++    +E ++   + + + ++ RSF Q  P+A   +  +++P   T VL+ +F
Subjt:  SIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAV--QNKPRLSTNVLAGVF

Q59YL9 Pre-rRNA-processing protein ESF23.3e-3334.86Show/hide
Query:  ESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALED-AENERTDSILRENSDGKI-LESDNG-KNQR
        E+N       VK K            E F +DE    E++ E    +       G   F        ED A +E ++  + ++ DG   L  D G K  +
Subjt:  ESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALED-AENERTDSILRENSDGKI-LESDNG-KNQR

Query:  KIKR--KKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIG
        K+K+   K+L KE       G+CYLSRVPP+M P KLR +LS+ GEI R++L PED +   +R + GG + + F+EGW+EF +K  AK  A  LNG  +G
Subjt:  KIKR--KKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIG

Query:  GRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSF
        G+K S +Y D+ NIKYL  FKW DLT++ A ++ +R+ KLA+EIS  ++    +++ V+KS+ + +I+    KK+K  +D   N   D  Q+     RS 
Subjt:  GRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSF

Query:  PQTQPVADFAVQNKPRLSTN-VLAGVF
         +     D   ++KP    N +L+ VF
Subjt:  PQTQPVADFAVQNKPRLSTN-VLAGVF

Q6BSS5 Pre-rRNA-processing protein ESF23.8e-3733.33Show/hide
Query:  ESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKK----QLLKEAANADMRGICYLSR
        + F  DE  + + +     K+AS + N  +E   ++  +  ED +      I+ E +       +N K  + I  KK    QL KE       G+CYLS+
Subjt:  ESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKK----QLLKEAANADMRGICYLSR

Query:  VPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTE
        +PP+M P KLR +LS+ G+I R++L PED ++  +R + GG + + ++ GWVEF +K+ AK  A  LNG  +GG+K S +Y D+ NIKYLS FKW DLT+
Subjt:  VPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTE

Query:  ETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKL-IRSFPQTQPVADFAVQNKPRLS---TNVLA
        + A ++ IR+ KL++E+S  ++    ++  V+KS+ +N+++   K+K +  E    NS  ++S     L  R    T+  A+  +++K + +    +VL+
Subjt:  ETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKL-IRSFPQTQPVADFAVQNKPRLS---TNVLA

Query:  GVF
         VF
Subjt:  GVF

Q6CFT1 Pre-rRNA-processing protein ESF21.1e-3333.23Show/hide
Query:  SNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFE---KRKIALEDAENERTDSILRENSDGKILESDNGKNQRK
        S  N  SD   ++++ K +   R   +    E  E +   +   +E    S   ++ FFE   K     ++ E+E  +    E  + K +++ + K + K
Subjt:  SNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFE---KRKIALEDAENERTDSILRENSDGKILESDNGKNQRK

Query:  IKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRK
           K+++ K        G+ Y SR+PP MDP KLR +L + G + RIYL PED  +Q  R R GG R   ++EGW EFT KR AK  A+ LNG  IGG+K
Subjt:  IKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRK

Query:  RSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQT
         S  Y D+ N KYL KFKW DL+E+ A +   R+ +L  EIS A RE   Y+  ++KS+A         ++++ R++ E   T +   K  K+ R F Q 
Subjt:  RSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQT

Query:  QPVADFAVQNKPRLSTNVLAGVFGS
        +  +  A + K  L  +V   + GS
Subjt:  QPVADFAVQNKPRLSTNVLAGVFGS

Arabidopsis top hitse value%identityAlignment
AT3G56510.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-7758.2Show/hide
Query:  DAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF
        +  +E TD I  E    + ++S     ++K K K++LLKEA+ AD RG+CYLSR+PPHMD ++LR IL+Q+GE+ RIYLAPED+ +QV RKRAGGFRGQ 
Subjt:  DAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF

Query:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK
        FSEGWVEF  K VAKRVA+MLNGE IGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+DFYL+K++KSRA+  I+ R++K
Subjt:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK

Query:  KQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        K+K++E+S  N+        P+ I  F Q + + +   Q+KP LST+ LA VFG S
Subjt:  KQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

AT3G56510.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-7758.2Show/hide
Query:  DAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF
        +  +E TD I  E    + ++S     ++K K K++LLKEA+ AD RG+CYLSR+PPHMD ++LR IL+Q+GE+ RIYLAPED+ +QV RKRAGGFRGQ 
Subjt:  DAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF

Query:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK
        FSEGWVEF  K VAKRVA+MLNGE IGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+DFYL+K++KSRA+  I+ R++K
Subjt:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK

Query:  KQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        K+K++E+S  N+        P+ I  F Q + + +   Q+KP LST+ LA VFG S
Subjt:  KQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATGAGGAGAGTTCTGAAGTTAATTTAAAAACTGACTGCAGCCCAGAATCTAGAAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAGGAAACAGTTATTGATAAA
AGGTGTAGATGTCATGGAAATGAAAGATGTAGGATCTGTTCAGCTGGGTGAAAGCAACATGAACACTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAGAAAGAAGAGTA
CTCAACAACGTGTAGAGGAGAGCTTTATCAAGGATGAGGCTGGAGAATATGAAAATAGAGCAGAGACTTTTATGAAAGAGGCTAGTCCTGTCTCTAATAGTGGAAGTGAA
ATTTTTTTCGAGAAGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGACAGTATACTTAGAGAAAACTCTGATGGGAAGATTCTGGAGTCTGACAATGGAAA
AAATCAAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCTAATGCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCACACATGGATCCTTTGA
AACTTCGTCAGATCCTCTCACAACATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAG
TTTTTTTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAGGGTGGCTAATATGTTAAATGGCGAACCAATAGGAGGAAGGAAGAGGTCATCTTTCTATTA
CGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACGGAAGAAACTGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTG
CTGCCAAGAGGGAAAGGGATTTCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGACTAAAGAAGAAGCAGAAGATGAGAGAAGATTCAGAG
ATGAATTCTACACTTGATGATAGTCAGAAACTTCCAAAGTTGATCCGCAGCTTTCCACAAACACAACCAGTTGCAGATTTTGCCGTACAAAACAAACCGAGACTATCTAC
AAATGTCTTGGCTGGGGTGTTTGGAAGCTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATCTTCTCCAAGAGAACACAACCGTCCCACCCCTTCGAACACAACCTCGCCGACAGGTCACTGCCCAGCTACCGCGCACGACTCGACCGCTGCAGCTCGTGTGCAGGAGA
CGCCGCGCTCAGGAGTTTTAGCTTGCACGCCACCGTTCGCCGCCGTCACACCAAACCCACGAATCTGGCAGTAGCTTAGTTGTTTGCTCGCGTCATTGTCTCATATTTGT
CTTGTGCCGCAGCTTTGAACACCACGTGCCGTTCTCGCTAAATTTTGGCTTTCGGGAAGATGTCCAATGAGGAGAGTTCTGAAGTTAATTTAAAAACTGACTGCAGCCCA
GAATCTAGAAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAGGAAACAGTTATTGATAAAAGGTGTAGATGTCATGGAAATGAAAGATGTAGGATCTGTTCAGCTGGGTGA
AAGCAACATGAACACTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAGAAAGAAGAGTACTCAACAACGTGTAGAGGAGAGCTTTATCAAGGATGAGGCTGGAGAATATG
AAAATAGAGCAGAGACTTTTATGAAAGAGGCTAGTCCTGTCTCTAATAGTGGAAGTGAAATTTTTTTCGAGAAGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGG
ACTGACAGTATACTTAGAGAAAACTCTGATGGGAAGATTCTGGAGTCTGACAATGGAAAAAATCAAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCTAA
TGCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCACACATGGATCCTTTGAAACTTCGTCAGATCCTCTCACAACATGGGGAAATACAAAGAATTTATCTTG
CACCCGAGGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTTTTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAGG
GTGGCTAATATGTTAAATGGCGAACCAATAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCAC
GGAAGAAACTGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCTAAAGTTGATAAATCACGTG
CATTGAATTCCATTGAAGAACGACTAAAGAAGAAGCAGAAGATGAGAGAAGATTCAGAGATGAATTCTACACTTGATGATAGTCAGAAACTTCCAAAGTTGATCCGCAGC
TTTCCACAAACACAACCAGTTGCAGATTTTGCCGTACAAAACAAACCGAGACTATCTACAAATGTCTTGGCTGGGGTGTTTGGAAGCTCCTAGTCGTCTATTTCCCGACT
TCTACTAATTAAAGAGATTTAAGACAAGTGATTTGCTTTATAGACGGGCTTTTTGTAGACAGAGCCAAGCAATCTTTTACTTTCAACTTATTTATCTCATTACACAACAG
AAAATGTGTAGAAGGAATAGTTGTAGCTTTGATATTTGTTTACTTAAATCGAACTTTTTGTATTTGATAATTCTGGCAGAAAGCATGGCCAAGTAGTGAATTATAAATCA
AGAAAAAGTTTTGG
Protein sequenceShow/hide protein sequence
MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSE
IFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQ
FFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSE
MNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS