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CSPI05G18180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G18180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNuclear pore membrane glycoprotein 210-like
Genome locationChr5:19270253..19272539
RNA-Seq ExpressionCSPI05G18180
SyntenyCSPI05G18180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578668.1 hypothetical protein SDJN03_23116, partial [Cucurbita argyrosperma subsp. sororia]6.1e-5292.17Show/hide
Query:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNL L P  KT+   QISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLENLLEKS
        RYILNLYL+NLLEKS
Subjt:  RYILNLYLENLLEKS
XP_004142788.1 uncharacterized protein LOC101221627 [Cucumis sativus]1.8e-59100Show/hide
Query:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLENLLEKS
        RYILNLYLENLLEKS
Subjt:  RYILNLYLENLLEKS
XP_008458808.1 PREDICTED: uncharacterized protein LOC103498107 [Cucumis melo]4.4e-5898.26Show/hide
Query:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNLPLAP +KTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLENLLEKS
        RYILNLYLENLLEKS
Subjt:  RYILNLYLENLLEKS
XP_022993339.1 uncharacterized protein LOC111489380 [Cucurbita maxima]2.3e-5191.3Show/hide
Query:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNL L P  KT+   QI CRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLENLLEKS
        RYILNLYL+NLLEKS
Subjt:  RYILNLYLENLLEKS
XP_038889728.1 uncharacterized protein LOC120079572 [Benincasa hispida]5.6e-5391.3Show/hide
Query:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNL LA  HKT+   Q+SCRRKEKERNNFDPYKVIEITPPPK+LGIRCFPPNLQCGE+VTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLENLLEKS
        RYILNLYLENLLEKS
Subjt:  RYILNLYLENLLEKS
TrEMBL top hitse value%identityAlignment
A0A0A0KP15 Uncharacterized protein8.6e-60100Show/hide
Query:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLENLLEKS
        RYILNLYLENLLEKS
Subjt:  RYILNLYLENLLEKS
A0A1S3C8Q2 uncharacterized protein LOC1034981072.1e-5898.26Show/hide
Query:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNLPLAP +KTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLENLLEKS
        RYILNLYLENLLEKS
Subjt:  RYILNLYLENLLEKS
A0A6J1BVQ0 uncharacterized protein LOC1110061842.4e-4989.38Show/hide
Query:  MASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRY
        MAS NL LA   KT+   Q+SCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVT RYQLRKGKYEP+EKRLDVLSTGRY
Subjt:  MASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRY

Query:  ILNLYLENLLEKS
        ILNLYLENLLEKS
Subjt:  ILNLYLENLLEKS
A0A6J1FGM6 uncharacterized protein LOC1114453151.9e-5190.43Show/hide
Query:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNL L P  KT+   QI CRRK+KERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLENLLEKS
        RYILNLYL+NLLEKS
Subjt:  RYILNLYLENLLEKS
A0A6J1JZX4 uncharacterized protein LOC1114893801.1e-5191.3Show/hide
Query:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNL L P  KT+   QI CRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLENLLEKS
        RYILNLYL+NLLEKS
Subjt:  RYILNLYLENLLEKS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G40500.1 unknown protein2.4e-3876.53Show/hide
Query:  RFQISCRRKEKERN-NFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRYILNLYLENLLEKS
        R QI+CR+KEK R+ +  PYKVIEITPPPK+LGIRC P NLQCGE+V IEGQTYTISAVT RYQLRKGKYEPSE+RLDVLS  RY+LNLY +NLL+ S
Subjt:  RFQISCRRKEKERN-NFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRYILNLYLENLLEKS
AT5G40500.2 unknown protein8.3e-3970.18Show/hide
Query:  MASFNLPLAPRHKTQGRFQISCRRKEKERN-NFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
        MA+    LA   K   R QI+CR+KEK R+ +  PYKVIEITPPPK+LGIRC P NLQCGE+V IEGQTYTISAVT RYQLRKGKYEPSE+RLDVLS  R
Subjt:  MASFNLPLAPRHKTQGRFQISCRRKEKERN-NFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR

Query:  YILNLYLENLLEKS
        Y+LNLY +NLL+ S
Subjt:  YILNLYLENLLEKS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCTTCATTCAATCTACCTCTTGCTCCTCGTCACAAGACGCAGGGGCGTTTCCAAATTTCTTGTAGAAGAAAAGAAAAGGAACGCAATAATTTTGACCCTTA
CAAAGTTATTGAAATCACCCCTCCGCCCAAGAACCTCGGCATTCGTTGCTTCCCTCCCAACTTACAATGTGGAGAGAGTGTTACAATAGAAGGTCAAACATATACTATCT
CAGCTGTAACTCTTCGCTATCAGCTCAGGAAGGGGAAGTATGAACCAAGTGAAAAAAGACTTGATGTTTTGTCCACAGGAAGGTACATCTTGAATTTGTATCTTGAAAAT
TTGTTAGAAAAATCTTGA
mRNA sequenceShow/hide mRNA sequence
CTTTGCACGAAGTTAAAATGGAACACCAAAAGAAATTACACAAAAATCTTTCGACATTTCTACTTTTCCTTCCATCTCTTTCCACTGCACAAAAAAACTCCATCTGCAAA
TCAAAACCACAATTTTGAAGGAATTTGGATTATGGCAATGGCTTCATTCAATCTACCTCTTGCTCCTCGTCACAAGACGCAGGGGCGTTTCCAAATTTCTTGTAGAAGAA
AAGAAAAGGAACGCAATAATTTTGACCCTTACAAAGTTATTGAAATCACCCCTCCGCCCAAGAACCTCGGCATTCGTTGCTTCCCTCCCAACTTACAATGTGGAGAGAGT
GTTACAATAGAAGGTCAAACATATACTATCTCAGCTGTAACTCTTCGCTATCAGCTCAGGAAGGGGAAGTATGAACCAAGTGAAAAAAGACTTGATGTTTTGTCCACAGG
AAGGTACATCTTGAATTTGTATCTTGAAAATTTGTTAGAAAAATCTTGAGGGAAGAGAAGCAGTAGAAACCCATTGAAATGTTGTATCATAGATTGATAAAATAATGTAA
TGTTCGTTCTGATATTATCCTATTACAATGATCATTAGTTGAACTAATTCGTGCATATTCAAACTTGCAACTTAGTGTTTCCATG
Protein sequenceShow/hide protein sequence
MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRYILNLYLEN
LLEKS