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CSPI05G18350 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G18350
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCACTA en-spm transposon protein
Genome locationChr5:19404243..19404913
RNA-Seq ExpressionCSPI05G18350
SyntenyCSPI05G18350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032168.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.7e-3049.03Show/hide
Query:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ-------------
        A   SQ T  TPRRR   R L+L+R+V  NG+IP++IAPG +KPISPHA+ FS  I    R TFP   LKWTG   EYI++VK  LQ             
Subjt:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ-------------

Query:  ------------EFKGQNHRHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT
                    EF+   HRHFKK+SDPE+AR NPP+ L  R EDWHFLCD Y++
Subjt:  ------------EFKGQNHRHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT

KAA0046834.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.4e-3155.3Show/hide
Query:  SQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNHRHFK
        SQ T  TPRRR   R L+L+R+V  NG+IP++IAPG +KPISPHA+ FS  I    R TFP   LKWT    EYI++VK  LQ      EF+   HR+FK
Subjt:  SQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNHRHFK

Query:  KFSDPEQARANPPSRLKNRVEDWHFLCDLYLT
        K+SDP +ARANPP+ L  R EDWHFLCD Y++
Subjt:  KFSDPEQARANPPSRLKNRVEDWHFLCDLYLT

KAA0047983.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.7e-3052.94Show/hide
Query:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNH
        A   SQ T  TPRRR   R L+L+R++  NG+IP++IAPG +KPIS H + FS  I    R TFP   LKW     EYI++VK  LQ      EF+   H
Subjt:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNH

Query:  RHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT
        RHFKK+SDPE+ARANPP+ L  R EDWHFLCD Y++
Subjt:  RHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT

KAA0063382.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.4e-3154.41Show/hide
Query:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNH
        A   SQ T  T RRR   R L+L+R+V  NG+IP++IAPG +KPISPHA+ FS  I    R TFP   LKW     EYI++VK  LQ      EF+   H
Subjt:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNH

Query:  RHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT
        RHFKK+SDPE+ARANPP+ L  R EDWHFLCD Y++
Subjt:  RHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT

XP_031741168.1 uncharacterized protein LOC116403757 [Cucumis sativus]2.7e-5776.82Show/hide
Query:  GSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ----------------
        GSQPTARTPRRREH RNLKLDRYVQ+NGKIPISI P KDKPISPHAI+FSCTI ELTRDTFP +ALKWTGTTPEYIKLVK+SLQ                
Subjt:  GSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ----------------

Query:  --------EFKGQNHRHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT
                EFKGQNHRHFKKFSDPEQARANPPS LKNRVEDWHFLCD YLT
Subjt:  --------EFKGQNHRHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT

TrEMBL top hitse value%identityAlignment
A0A5A7SNG1 CACTA en-spm transposon protein8.1e-3149.03Show/hide
Query:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ-------------
        A   SQ T  TPRRR   R L+L+R+V  NG+IP++IAPG +KPISPHA+ FS  I    R TFP   LKWTG   EYI++VK  LQ             
Subjt:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ-------------

Query:  ------------EFKGQNHRHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT
                    EF+   HRHFKK+SDPE+AR NPP+ L  R EDWHFLCD Y++
Subjt:  ------------EFKGQNHRHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT

A0A5A7TUT1 CACTA en-spm transposon protein1.6e-3155.3Show/hide
Query:  SQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNHRHFK
        SQ T  TPRRR   R L+L+R+V  NG+IP++IAPG +KPISPHA+ FS  I    R TFP   LKWT    EYI++VK  LQ      EF+   HR+FK
Subjt:  SQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNHRHFK

Query:  KFSDPEQARANPPSRLKNRVEDWHFLCDLYLT
        K+SDP +ARANPP+ L  R EDWHFLCD Y++
Subjt:  KFSDPEQARANPPSRLKNRVEDWHFLCDLYLT

A0A5A7TWL6 CACTA en-spm transposon protein8.1e-3152.94Show/hide
Query:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNH
        A   SQ T  TPRRR   R L+L+R++  NG+IP++IAPG +KPIS H + FS  I    R TFP   LKW     EYI++VK  LQ      EF+   H
Subjt:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNH

Query:  RHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT
        RHFKK+SDPE+ARANPP+ L  R EDWHFLCD Y++
Subjt:  RHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT

A0A5A7V548 CACTA en-spm transposon protein1.6e-3154.41Show/hide
Query:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNH
        A   SQ T  T RRR   R L+L+R+V  NG+IP++IAPG +KPISPHA+ FS  I    R TFP   LKW     EYI++VK  LQ      EF+   H
Subjt:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ------EFKGQNH

Query:  RHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT
        RHFKK+SDPE+ARANPP+ L  R EDWHFLCD Y++
Subjt:  RHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT

A0A5D3CIP7 CACTA en-spm transposon protein1.1e-3049.03Show/hide
Query:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ-------------
        A   SQ T  TPRRR   R L+L+R+V  NG+IP++IAPG +KPISPHA+ FS  I    R TFP   LKWT    EYI++VK  LQ             
Subjt:  ATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQ-------------

Query:  ------------EFKGQNHRHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT
                    EF+   HRHFKK+SDPE+ARANPP+ L  R EDWHFLCD Y++
Subjt:  ------------EFKGQNHRHFKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACAAGTTCAATGACGCAAGAGGCACGTCATCAGTGGGCGACACATGGCTCTCAACCTACTGCTCGCACTCCTAGAAGACGAGAGCACTTGAGGAACTTGAAGTT
GGATAGATACGTGCAGCGAAATGGGAAGATCCCCATATCCATCGCTCCAGGAAAAGATAAACCGATCTCCCCACATGCCATTCTCTTCAGTTGTACCATTAGCGAGTTAA
CGCGAGATACTTTTCCAAGTTACGCTCTTAAGTGGACTGGCACTACTCCGGAGTACATCAAGCTTGTGAAGGAAAGTTTACAGGAGTTCAAGGGGCAGAACCACCGTCAT
TTTAAGAAGTTCAGTGATCCTGAACAAGCACGTGCCAACCCACCCTCCAGATTGAAGAATCGTGTGGAAGATTGGCACTTCCTCTGCGATCTCTACCTTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACAAGTTCAATGACGCAAGAGGCACGTCATCAGTGGGCGACACATGGCTCTCAACCTACTGCTCGCACTCCTAGAAGACGAGAGCACTTGAGGAACTTGAAGTT
GGATAGATACGTGCAGCGAAATGGGAAGATCCCCATATCCATCGCTCCAGGAAAAGATAAACCGATCTCCCCACATGCCATTCTCTTCAGTTGTACCATTAGCGAGTTAA
CGCGAGATACTTTTCCAAGTTACGCTCTTAAGTGGACTGGCACTACTCCGGAGTACATCAAGCTTGTGAAGGAAAGTTTACAGGAGTTCAAGGGGCAGAACCACCGTCAT
TTTAAGAAGTTCAGTGATCCTGAACAAGCACGTGCCAACCCACCCTCCAGATTGAAGAATCGTGTGGAAGATTGGCACTTCCTCTGCGATCTCTACCTTACTTGA
Protein sequenceShow/hide protein sequence
MSTSSMTQEARHQWATHGSQPTARTPRRREHLRNLKLDRYVQRNGKIPISIAPGKDKPISPHAILFSCTISELTRDTFPSYALKWTGTTPEYIKLVKESLQEFKGQNHRH
FKKFSDPEQARANPPSRLKNRVEDWHFLCDLYLT