; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G18420 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G18420
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransmembrane protein
Genome locationChr5:19449505..19450252
RNA-Seq ExpressionCSPI05G18420
SyntenyCSPI05G18420
Gene Ontology termsGO:0010190 - cytochrome b6f complex assembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51853.2 hypothetical protein Csa_008870 [Cucumis sativus]1.4e-8699.38Show/hide
Query:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG
        MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGAT AETGG
Subjt:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG

Query:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

XP_008458773.1 PREDICTED: uncharacterized protein LOC103498078 [Cucumis melo]1.3e-8497.53Show/hide
Query:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG
        MQESPS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV RRGECDGAT AETGG
Subjt:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG

Query:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPE+SPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

XP_011655414.1 uncharacterized protein LOC105435525 [Cucumis sativus]1.4e-8699.38Show/hide
Query:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG
        MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGAT AETGG
Subjt:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG

Query:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

XP_023536558.1 uncharacterized protein LOC111797691 [Cucurbita pepo subsp. pepo]2.6e-6479.52Show/hide
Query:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTA-ETG
        M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWM+GRRCLQ+A   RKKRKL+ R+ ECDGA  A ETG
Subjt:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTA-ETG

Query:  GCVGNEKGLPEVSPGSG---EEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
             E+ LPE+ PGSG   EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Subjt:  GCVGNEKGLPEVSPGSG---EEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

XP_038891069.1 uncharacterized protein LOC120080480 [Benincasa hispida]4.4e-8091.36Show/hide
Query:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG
        MQESPS+ TRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALAL+KLPWMVGRRCLQ+ARKKRKKRKL+ RRGECDGAT AETGG
Subjt:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG

Query:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        C  +E+GLPE+SPGSGEE+ET GNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

TrEMBL top hitse value%identityAlignment
A0A0A0KR58 Uncharacterized protein6.8e-8799.38Show/hide
Query:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG
        MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGAT AETGG
Subjt:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG

Query:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

A0A1S3C8M3 uncharacterized protein LOC1034980786.4e-8597.53Show/hide
Query:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG
        MQESPS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV RRGECDGAT AETGG
Subjt:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG

Query:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPE+SPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

A0A5A7T2E5 Uncharacterized protein6.4e-8597.53Show/hide
Query:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG
        MQESPS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV RRGECDGAT AETGG
Subjt:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGG

Query:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPE+SPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

A0A6J1HEE2 uncharacterized protein LOC1114632066.2e-6478.44Show/hide
Query:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTA-ETG
        M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWM+GRRCLQ+A   RKKRKL+ R+ ECDGA  A ET 
Subjt:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTA-ETG

Query:  GCVGNEKGLPEVSPGS----GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
          +  E+GLPE+ PGS     EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Subjt:  GCVGNEKGLPEVSPGS----GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

A0A6J1JH40 uncharacterized protein LOC1114869581.1e-6376.74Show/hide
Query:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTA-ETG
        M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWM+GRRCLQ+A   RKKRKL+ R+ ECDGA  A ETG
Subjt:  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTA-ETG

Query:  GCVGNEKGLPEVSPGS---------GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
             E+GLPE+ PGS          EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Subjt:  GCVGNEKGLPEVSPGS---------GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01516.1 unknown protein3.0e-2643.14Show/hide
Query:  CSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECD------GATTAETGGCVGNEKG-----------
        CSGK CRS  A  +ADCVA+CCCPC+VV+   LA VK+PWM+GR+C+ +    +K+ K + R            +    +GGC G   G           
Subjt:  CSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECD------GATTAETGGCVGNEKG-----------

Query:  -------LPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTG
                 E    S +E+E T   SAR EAER+WL+LYQ+G LGFGRVSFTG
Subjt:  -------LPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTG

AT3G11690.1 unknown protein9.3e-0426.98Show/hide
Query:  SPSQATRRR---RFAVDDGADLIDCSGKHCRSCTAGLVADCVAV-CCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETG
        SPS++ RR+   + ++   +    C G        G  A C AV CCCPC +V+ L LA+ K+P  + RR ++  R+K+  +  +      DG       
Subjt:  SPSQATRRR---RFAVDDGADLIDCSGKHCRSCTAGLVADCVAV-CCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETG

Query:  GCVGNEKGLPEVSPGSGEEDETTGNF
            +E  +  +      +DE   NF
Subjt:  GCVGNEKGLPEVSPGSGEEDETTGNF

AT5G14690.1 unknown protein2.4e-2838.97Show/hide
Query:  ESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV---CRRGECDGA------
        ++  +  RRRR       D + CS K CRS  A  +ADCVA+CCCPC++++ L L LVK+PWM+GRRCL    + +KKR+++    RRG  +G       
Subjt:  ESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV---CRRGECDGA------

Query:  -------TTAET----------GGCVG------------------NEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTG
                TAE           GGC G                   E+   E +     ED      SAR EAER+WL+LYQ+G LGFGRVSFTG
Subjt:  -------TTAET----------GGCVG------------------NEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAAAGCCCATCACAAGCCACGCGGCGGCGAAGATTCGCCGTGGACGACGGAGCCGATCTAATTGACTGCTCCGGCAAGCATTGCCGATCCTGCACCGCCGGGTT
GGTGGCGGATTGCGTCGCCGTCTGCTGCTGCCCCTGCTCGGTGGTCAGCTTCTTGGCTCTGGCTTTGGTCAAACTGCCGTGGATGGTCGGACGGCGGTGTCTGCAGCAGG
CGAGGAAGAAGAGGAAGAAGAGGAAATTGGTTTGCCGGAGAGGGGAATGCGACGGCGCTACGACGGCGGAAACTGGTGGGTGTGTGGGAAATGAAAAGGGATTGCCGGAA
GTTTCGCCGGGATCCGGCGAGGAAGATGAAACGACGGGGAATTTTAGTGCAAGATTTGAAGCAGAGAGGATTTGGTTGCAATTGTATCAAGTGGGTCAGTTGGGATTTGG
AAGAGTTTCTTTCACTGGGAATTCAAACCTTTGGCCTAATTCCAATTAA
mRNA sequenceShow/hide mRNA sequence
CACTTATAAATAAAGCCATAAAATCTTTTTCCAAAGGGAATTTACATTCCAAAGTGTTCATCAAAAAATTTCTTGCAGCCTTCCGATCAAGAAAAAACCACGCAGACACA
CAGAAATTCACAAAATGCAAGAAAGCCCATCACAAGCCACGCGGCGGCGAAGATTCGCCGTGGACGACGGAGCCGATCTAATTGACTGCTCCGGCAAGCATTGCCGATCC
TGCACCGCCGGGTTGGTGGCGGATTGCGTCGCCGTCTGCTGCTGCCCCTGCTCGGTGGTCAGCTTCTTGGCTCTGGCTTTGGTCAAACTGCCGTGGATGGTCGGACGGCG
GTGTCTGCAGCAGGCGAGGAAGAAGAGGAAGAAGAGGAAATTGGTTTGCCGGAGAGGGGAATGCGACGGCGCTACGACGGCGGAAACTGGTGGGTGTGTGGGAAATGAAA
AGGGATTGCCGGAAGTTTCGCCGGGATCCGGCGAGGAAGATGAAACGACGGGGAATTTTAGTGCAAGATTTGAAGCAGAGAGGATTTGGTTGCAATTGTATCAAGTGGGT
CAGTTGGGATTTGGAAGAGTTTCTTTCACTGGGAATTCAAACCTTTGGCCTAATTCCAATTAAGCTCTCTAAATTTAATTACTCTAATTTGTAAAGTTAGTTAATAAGGT
AAAATTATTAATTTAGCATTCTATTCTTGTGTTTATTCAGTCTCTGAGTTTTTACAAAAGAAAAAATATATATATTCAAACTACATTT
Protein sequenceShow/hide protein sequence
MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGGCVGNEKGLPE
VSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN