CuGenDBv2

Gene ID	CSPI05G18760
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B
Genome location	Chr5:19852039..19857282
RNA-Seq Expression	CSPI05G18760
Synteny	CSPI05G18760
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR012576 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008460580.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumis melo]

8.3e-34

97.3

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        MANKPLGSTGEFFRRRDEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHS+ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

XP_011655428.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumis sativus]

9.8e-35

100

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

XP_022950932.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita moschata]

1.6e-32

94.59

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        MANKPLGSTGEFFRR DEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHH++ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

XP_022974255.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita maxima]

3.5e-32

93.24

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        MANKPLGSTGEFFRR DEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHH++ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

XP_038876540.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Benincasa hispida]

7.0e-33

94.59

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        MANKPLGSTGEFFRRRDEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS SHHHH++ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KR92 Uncharacterized protein

4.8e-35

100

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

A0A1S3CD83 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B

4.0e-34

97.3

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        MANKPLGSTGEFFRRRDEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHS+ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

A0A6J1GG90 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

7.6e-33

94.59

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        MANKPLGSTGEFFRR DEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHH++ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

A0A6J1IDH2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

1.7e-32

93.24

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        MANKPLGSTGEFFRR DEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHH++ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

A0A6J1KDK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

3.8e-32

93.24

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        MANKPLGSTGEFFRRRDEWRKHP L+NQFRHATPGLGIALVAFGIYLVGEQVYNRI SPSSSHHHH++ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

SwissProt top hits

e value

%identity

Alignment

O64725 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A

3.8e-21

70.97

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Query:  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH
        KPLG+TGEFFRRRDEWRKHPMLSNQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS   H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH

Q9M9R9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B

3.6e-24

69.01

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Query:  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        KPLG+TGEFFRRRDEWRKHPMLSNQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S HHH   ++ +H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

Arabidopsis top hits

e value

%identity

Alignment

AT1G14450.1 NADH dehydrogenase (ubiquinone)s

2.6e-25

69.01

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Query:  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH
        KPLG+TGEFFRRRDEWRKHPMLSNQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S HHH   ++ +H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

AT2G02510.1 NADH dehydrogenase (ubiquinone)s

2.7e-22

70.97

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Query:  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH
        KPLG+TGEFFRRRDEWRKHPMLSNQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS   H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH

Sequences

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CDS sequence

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ATGGCCAATAAGCCTTTGGGATCGACGGGAGAGTTCTTCAGGAGGAGAGATGAATGGAGGAAGCATCCCATGCTTTCCAATCAGTTCCGTCACGCCACTCCTGGCCTCGG
CATCGCCCTCGTTGCTTTCGGCATCTACCTTGTCGGCGAGCAAGTTTACAACAGGATCAATTCTCCTTCTTCTTCTCACCACCACCATTCCAATGCATCCTCCGCCACCC
ATTAA

mRNA sequence

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AGAAAGGGTAATAAAGTAATTTTCGATGTAGTTGAGGAGAAGCTGAAAACTGGGAAGAGGGGAAGGGAAAGTCGGAAGTGCGCAATTTTGGATCTTTAAACTCGAAGAAG
GAGAAAGAAATCAGAGCAAGCAATCTTCAATGGCCAATAAGCCTTTGGGATCGACGGGAGAGTTCTTCAGGAGGAGAGATGAATGGAGGAAGCATCCCATGCTTTCCAAT
CAGTTCCGTCACGCCACTCCTGGCCTCGGCATCGCCCTCGTTGCTTTCGGCATCTACCTTGTCGGCGAGCAAGTTTACAACAGGATCAATTCTCCTTCTTCTTCTCACCA
CCACCATTCCAATGCATCCTCCGCCACCCATTAACTTCTACCGATGCATTCCTGCTAGGTGAATCCAAGCTTGGAGTTCTATAGCACTCGTTCTCTTTTACTTTTACTTT
CTTTTTTTATGTGCAATAAAAGTAAAACTTTTGCTGGACGAAGCTTGTGAATGTATTTGATGAAGTTGGGATTGAAATTTCCATCACTAACTGAAATGTTTAATTTTACA
ATCTAGTGGTTCAAGCAATTCCTTTTGCTCATGGCCAGTGATGAGGTTTCCTTTTATTTCCTTTTATTAAATATGATTTTAAGTTTATGTTCCTTGCCGACCCCAGGAAA
GCTTATTATATATTAGTACTTCTGTTTATTTGATCTTCTTTTTCACTTTCTGAACCTCATTTGGTCCAGCAT

Protein sequence

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MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSNASSATH

CSPI05G18760 (gene) of Cucumber (PI 183967) v1 genome