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CSPI05G18770 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G18770
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLOB domain-containing protein
Genome locationChr5:19875548..19877174
RNA-Seq ExpressionCSPI05G18770
SyntenyCSPI05G18770
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648572.1 hypothetical protein Csa_008335, partial [Cucumis sativus]6.0e-23100Show/hide
Query:  SPPSSPSPSSIVQASVVVSLCMACKILEKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLL
        SPPSSPSPSSIVQASVVVSLCMACKILEKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLL
Subjt:  SPPSSPSPSSIVQASVVVSLCMACKILEKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLL

KAE8651792.1 hypothetical protein Csa_023609, partial [Cucumis sativus]1.7e-1779.71Show/hide
Query:  IVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTSSEETRVGLEL
        IVQASVVVS C+ACKIL     +KCILAPYFP S+  KFTIAHRIF TSNIIKLLLKTS EETRVGLEL
Subjt:  IVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTSSEETRVGLEL

XP_004147299.1 LOB domain-containing protein 1 [Cucumis sativus]2.8e-1264.94Show/hide
Query:  LQLSQSPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLL
        L LS SP    SP  SPSP   VQA VVV+ C ACKIL     +KC+LAPYFPPS   KFTIAHRIF  SNIIKLLL
Subjt:  LQLSQSPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLL

XP_008463550.1 PREDICTED: LOB domain-containing protein 1-like [Cucumis melo]2.5e-1362.65Show/hide
Query:  MQRLQLSQSPPSSL---SPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLL
        M+  ++  SP S+L   SP  SPSP   VQA VVVS C ACKIL     EKC+LAPYFPPS   KFTIAHRIF  SNIIKLLL
Subjt:  MQRLQLSQSPPSSL---SPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLL

XP_038895012.1 LOB domain-containing protein 1-like [Benincasa hispida]2.8e-1267.16Show/hide
Query:  SLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        S SP SSPSP   +Q  VVVS C ACKIL     EKC+LAPYFPPS   KFTIAHR+F  SNIIKLL
Subjt:  SLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

TrEMBL top hitse value%identityAlignment
A0A1S3CK12 LOB domain-containing protein 1-like1.2e-1362.65Show/hide
Query:  MQRLQLSQSPPSSL---SPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLL
        M+  ++  SP S+L   SP  SPSP   VQA VVVS C ACKIL     EKC+LAPYFPPS   KFTIAHRIF  SNIIKLLL
Subjt:  MQRLQLSQSPPSSL---SPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLL

A0A2I4GN44 LOB domain-containing protein 1-like3.0e-1263.16Show/hide
Query:  LQLSQSPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        LQLS+S  SS SPPSSPSP+      VVVS C ACKIL     E+C+LAPYFPP++  KFTIAHR+F  SNIIK L
Subjt:  LQLSQSPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

A0A498IKK6 LOB domain-containing protein8.8e-1260.81Show/hide
Query:  LSQSPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        +SQSPPSS SP S P+P+      VV+S C ACKIL     +KC+LAPYFPPS+  KFTIAHR+F  SNIIK L
Subjt:  LSQSPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

A0A5N5FUC4 LOB domain-containing protein 1-like2.3e-1259.46Show/hide
Query:  LSQSPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        +SQSPP S SP S P+P+      VV+S C ACKIL     +KC+LAPYFPPS+  KFTIAHR+F  SNIIK L
Subjt:  LSQSPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

A0A6J1DVT7 LOB domain-containing protein 11-like6.7e-1265.67Show/hide
Query:  SLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        S SP  SP P   + A VVVS C ACKIL     EKC+LAPYFPPS  FKFTIAHR+F  SNIIKLL
Subjt:  SLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

SwissProt top hitse value%identityAlignment
O64836 LOB domain-containing protein 102.0e-0546.67Show/hide
Query:  CMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        C ACK+L     ++C+ APYFPP+   KF   HR+F  SN+ K+L
Subjt:  CMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

Q9FKZ3 LOB domain-containing protein 363.1e-0644.44Show/hide
Query:  SLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTSSEE
        S C ACK L     ++C+ APYFPP Q  KF   H++F  SN+ KLL + +S +
Subjt:  SLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTSSEE

Q9LQR0 LOB domain-containing protein 11.2e-1058.82Show/hide
Query:  SSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        SS SPP S SP       VV+S C ACKIL     E+C+LAPYFPP+   KFTIAHR+F  SNIIK L
Subjt:  SSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

Q9SA51 LOB domain-containing protein 32.0e-0543.4Show/hide
Query:  VSLCMACKIL------EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTS
        VS C  CK+L      + C+ APYFP  + +KF I H+IF  SN+ K+L + S
Subjt:  VSLCMACKIL------EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTS

Q9SK08 LOB domain-containing protein 111.0e-1257.75Show/hide
Query:  SPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        SP  + SPP  PSP    Q  VV+S C ACKIL     +KC+LAPYFPP+   KFTIAHR+F  SNIIK L
Subjt:  SPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

Arabidopsis top hitse value%identityAlignment
AT1G07900.1 LOB domain-containing protein 18.7e-1258.82Show/hide
Query:  SSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        SS SPP S SP       VV+S C ACKIL     E+C+LAPYFPP+   KFTIAHR+F  SNIIK L
Subjt:  SSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

AT1G16530.1 ASYMMETRIC LEAVES 2-like 91.4e-0643.4Show/hide
Query:  VSLCMACKIL------EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTS
        VS C  CK+L      + C+ APYFP  + +KF I H+IF  SN+ K+L + S
Subjt:  VSLCMACKIL------EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTS

AT2G23660.1 LOB domain-containing protein 101.4e-0646.67Show/hide
Query:  CMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        C ACK+L     ++C+ APYFPP+   KF   HR+F  SN+ K+L
Subjt:  CMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

AT2G28500.1 LOB domain-containing protein 117.1e-1457.75Show/hide
Query:  SPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL
        SP  + SPP  PSP    Q  VV+S C ACKIL     +KC+LAPYFPP+   KFTIAHR+F  SNIIK L
Subjt:  SPPSSLSPPSSPSPSSIVQASVVVSLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLL

AT5G66870.1 ASYMMETRIC LEAVES 2-like 12.2e-0744.44Show/hide
Query:  SLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTSSEE
        S C ACK L     ++C+ APYFPP Q  KF   H++F  SN+ KLL + +S +
Subjt:  SLCMACKIL-----EKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTSSEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCGACTTCAACTTTCTCAGTCACCGCCCTCGTCTCTTTCACCGCCCTCGTCTCCTTCACCGTCGTCGATTGTTCAAGCCTCCGTGGTGGTCAGTCTATGTATGGC
ATGCAAGATTCTAGAGAAATGCATATTGGCCCCCTATTTTCCTCCCTCTCAGTCTTTCAAGTTCACCATTGCTCACCGCATCTTCAGCACTAGCAACATCATCAAATTGC
TTCTGAAAACATCTTCGGAAGAAACTCGGGTAGGATTAGAACTGTAG
mRNA sequenceShow/hide mRNA sequence
CTTCTTACTATTATTCTTCTTTTCCTCCCTCATTTTCGCGCTCTCCTTCTCCTTCACTCTCTTCTACTGAGCAAAATGCAGCGACTTCAACTTTCTCAGTCACCGCCCTC
GTCTCTTTCACCGCCCTCGTCTCCTTCACCGTCGTCGATTGTTCAAGCCTCCGTGGTGGTCAGTCTATGTATGGCATGCAAGATTCTAGAGAAATGCATATTGGCCCCCT
ATTTTCCTCCCTCTCAGTCTTTCAAGTTCACCATTGCTCACCGCATCTTCAGCACTAGCAACATCATCAAATTGCTTCTGAAAACATCTTCGGAAGAAACTCGGGTAGGA
TTAGAACTGTAGCTGCCAAAAGAAGAATGAGTTCCAATTAATCCTCTTCTGGTTGGATTTGGACAAAATATTTGCATTCCCCTTAAACCCAAATGTGGAAATTGTAGTGT
TAGTGACCTATGCTCATCTGCATTCAAGGAGTCTTCAACACCATCACTCAAATTAAATGGTTCAAGTTCTACCACAAAGTTGTGATCATCTTTATGTATGAATGAATATA
TTTACTTAGTCCAACGTTTTTCCCAAGTTTTTGGTTTTCTATCTTTTTGTTTTTTTTTTTTTTTGGCACCATAATGGTTTATGAATTTAGAGGTTCCATGATGGTTTATA
TCGCCAAGTGTTGAATAGATAAATAAGTGGATATTGAAGAATCTCAATTGACCAATGTTGTGTAGAACGAACCTTGTTATTGATATTATAATGTATTGATGTTGTTGGTG
CA
Protein sequenceShow/hide protein sequence
MQRLQLSQSPPSSLSPPSSPSPSSIVQASVVVSLCMACKILEKCILAPYFPPSQSFKFTIAHRIFSTSNIIKLLLKTSSEETRVGLEL