; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G18800 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G18800
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionStructural maintenance of chromosomes protein
Genome locationChr5:19956289..19958505
RNA-Seq ExpressionCSPI05G18800
SyntenyCSPI05G18800
Gene Ontology termsGO:0000819 - sister chromatid segregation (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005694 - chromosome (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR003395 - RecF/RecN/SMC, N-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR041738 - Structural maintenance of chromosomes 4, ABC domain, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054212.1 structural maintenance of chromosomes protein 4 [Cucumis melo var. makuwa]1.0e-11195.87Show/hide
Query:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
        M S+EPVDDLM +T +S NGAS  PRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
Subjt:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL

Query:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
        ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
Subjt:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE

Query:  DIIGTIKYVEMIDESNKQ
        DIIGTIKYVEMIDESNKQ
Subjt:  DIIGTIKYVEMIDESNKQ

XP_008460572.1 PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 4 [Cucumis melo]1.0e-11195.87Show/hide
Query:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
        M S+EPVDDLM +T +S NGAS  PRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
Subjt:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL

Query:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
        ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
Subjt:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE

Query:  DIIGTIKYVEMIDESNKQ
        DIIGTIKYVEMIDESNKQ
Subjt:  DIIGTIKYVEMIDESNKQ

XP_011655432.1 structural maintenance of chromosomes protein 4 [Cucumis sativus]1.8e-11699.54Show/hide
Query:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
        M STEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
Subjt:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL

Query:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
        ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
Subjt:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE

Query:  DIIGTIKYVEMIDESNKQ
        DIIGTIKYVEMIDESNKQ
Subjt:  DIIGTIKYVEMIDESNKQ

XP_038876535.1 structural maintenance of chromosomes protein 4 isoform X2 [Benincasa hispida]1.1e-10792.2Show/hide
Query:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
        M S+E VD++M ++A+S NG S  PRLFIKEMVL NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNH+NL
Subjt:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL

Query:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
        ESASVSVHFQEI+DLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
Subjt:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE

Query:  DIIGTIKYVEMIDESNKQ
        DIIGTIKYVEMIDES+KQ
Subjt:  DIIGTIKYVEMIDESNKQ

XP_038876536.1 structural maintenance of chromosomes protein 4 isoform X3 [Benincasa hispida]2.8e-10691.78Show/hide
Query:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
        M S+E VD++M ++A+S NG S  PRLFIKEMVL NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNH+NL
Subjt:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL

Query:  ESASVSVHFQEIVDL-DDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYL
        ESASVSVHFQEI+DL DDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYL
Subjt:  ESASVSVHFQEIVDL-DDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYL

Query:  EDIIGTIKYVEMIDESNKQ
        EDIIGTIKYVEMIDES+KQ
Subjt:  EDIIGTIKYVEMIDESNKQ

TrEMBL top hitse value%identityAlignment
A0A0A0KP68 SMC_N domain-containing protein8.5e-11799.54Show/hide
Query:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
        M STEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
Subjt:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL

Query:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
        ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
Subjt:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE

Query:  DIIGTIKYVEMIDESNKQ
        DIIGTIKYVEMIDESNKQ
Subjt:  DIIGTIKYVEMIDESNKQ

A0A1S3CCB7 Structural maintenance of chromosomes protein4.8e-11295.87Show/hide
Query:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
        M S+EPVDDLM +T +S NGAS  PRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
Subjt:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL

Query:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
        ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
Subjt:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE

Query:  DIIGTIKYVEMIDESNKQ
        DIIGTIKYVEMIDESNKQ
Subjt:  DIIGTIKYVEMIDESNKQ

A0A5A7UEJ3 Structural maintenance of chromosomes protein 44.8e-11295.87Show/hide
Query:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
        M S+EPVDDLM +T +S NGAS  PRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL
Subjt:  MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL

Query:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
        ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE
Subjt:  ESASVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLE

Query:  DIIGTIKYVEMIDESNKQ
        DIIGTIKYVEMIDESNKQ
Subjt:  DIIGTIKYVEMIDESNKQ

A0A6J1D9G1 Structural maintenance of chromosomes protein7.5e-10590.7Show/hide
Query:  TEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESA
        ++P+D+ M +  +S  G S  PRLFIKEMVL NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLE A
Subjt:  TEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESA

Query:  SVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDII
        SVSVHFQEIVDLDDGAYEAVPG+DFVITRAAFRDNSSKYYIN+R SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDII
Subjt:  SVSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDII

Query:  GTIKYVEMIDESNKQ
        GTIKYVEMIDESNKQ
Subjt:  GTIKYVEMIDESNKQ

A0A6J1GF37 Structural maintenance of chromosomes protein2.4e-10390.65Show/hide
Query:  EPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESAS
        E  D++M  +A+S+ G S  PRLFIKEMVL NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNST+HQNLESAS
Subjt:  EPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESAS

Query:  VSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIG
        VSVHF+EIVD D+G YE VPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIG
Subjt:  VSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIG

Query:  TIKYVEMIDESNKQ
        TIKYVEMIDESNKQ
Subjt:  TIKYVEMIDESNKQ

SwissProt top hitse value%identityAlignment
P50532 Structural maintenance of chromosomes protein 41.2e-5953.37Show/hide
Query:  EPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESAS
        E +  + P    +    +  PRL I  +V  NFKSYAGE+ +GPFHK FS ++GPNGSGKSNVID+MLFVFG RA+++R  K+S LIHNS  H++++S +
Subjt:  EPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESAS

Query:  VSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIG
        V VHFQ+I+D +   +E +P S+F ++R A++DNSS Y+I+ + + F +V   L+  G+DLD+NRFLILQGEVEQI++MKPK Q  HDEG LEYLEDIIG
Subjt:  VSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIG

Query:  TIKYVEMI
        + +  E I
Subjt:  TIKYVEMI

Q12267 Structural maintenance of chromosomes protein 41.3e-6163.54Show/hide
Query:  RLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY---EA
        RLFI E+VL NFKSYAG+Q VGPFH SFSAVVGPNGSGKSNVID+MLFVFG RA +MR +++S+LIH S    +L+S SV+VHFQ ++D   G     E 
Subjt:  RLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY---EA

Query:  VPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDE
         PG   +ITR AF++NSSKYYIN + S++TEVTK LK +G+DLD+ RFLILQGEVE I+ MKPKA+   D+G LEYLEDIIGT  Y  +I+E
Subjt:  VPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDE

Q54LV0 Structural maintenance of chromosomes protein 48.6e-6662.98Show/hide
Query:  NSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDL
        +S NG     RL I +MV+ NFKSYAG Q VGPFHK FS+VVGPNGSGKSNVIDAMLFVFG RAKQ+RLNK+SELIHNS NH+NL +  VSVHFQEI+DL
Subjt:  NSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDL

Query:  -DDGAYEAVPGSDFVITRAA-----FRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYV
          +  YE V GS+FV+TR A      +D  SKYY+N++     ++   LK KG+DLDNNRFLILQGEVEQI++MKPK   P +EG LEYLEDIIG+ KY+
Subjt:  -DDGAYEAVPGSDFVITRAA-----FRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYV

Query:  EMIDESNK
          I+ ++K
Subjt:  EMIDESNK

Q9FJL0 Structural maintenance of chromosomes protein 41.9e-9789.34Show/hide
Query:  STTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYE
        S TPRL+IKE+V+ NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL+SA VSV F+EI+DL++G YE
Subjt:  STTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYE

Query:  AVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNKQ
         VPGSDF+ITR AFRDNSSKYYIN R+SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGT KYVE IDE NKQ
Subjt:  AVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNKQ

Q9NTJ3 Structural maintenance of chromosomes protein 42.1e-5955Show/hide
Query:  EPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESAS
        E ++ + P    +    +  PRL I  +V  NFKSYAGE+ +GPFHK FS ++GPNGSGKSNVID+MLFVFG RA+++R  K+S LIHNS  H++++S +
Subjt:  EPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESAS

Query:  VSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIG
        V VHFQ+I+D +   YE +P S+F ++R A RDN+S Y+I+ +   F +V   L+  G+DLD+NRFLILQGEVEQI++MKPK Q  HDEG LEYLEDIIG
Subjt:  VSVHFQEIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIG

Arabidopsis top hitse value%identityAlignment
AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein1.6e-2236.75Show/hide
Query:  ASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY
        A  +P   I ++ + NFKSY G Q VGPF K F+A++GPNGSGKSN++DA+ FV G R  Q+R +++ +LI+ + + ++ E        + +  +DDG  
Subjt:  ASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY

Query:  EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK
              +   TR+      S+Y I+NR  N  E   KL+  G+ +    FL+ QG+VE I+   PK
Subjt:  EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK

AT3G54670.3 Structural maintenance of chromosomes (SMC) family protein1.6e-2236.75Show/hide
Query:  ASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY
        A  +P   I ++ + NFKSY G Q VGPF K F+A++GPNGSGKSN++DA+ FV G R  Q+R +++ +LI+ + + ++ E        + +  +DDG  
Subjt:  ASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY

Query:  EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK
              +   TR+      S+Y I+NR  N  E   KL+  G+ +    FL+ QG+VE I+   PK
Subjt:  EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK

AT5G48600.1 structural maintenance of chromosome 31.3e-9889.34Show/hide
Query:  STTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYE
        S TPRL+IKE+V+ NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL+SA VSV F+EI+DL++G YE
Subjt:  STTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYE

Query:  AVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNKQ
         VPGSDF+ITR AFRDNSSKYYIN R+SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGT KYVE IDE NKQ
Subjt:  AVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNKQ

AT5G48600.2 structural maintenance of chromosome 31.3e-9889.34Show/hide
Query:  STTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYE
        S TPRL+IKE+V+ NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNL+SA VSV F+EI+DL++G YE
Subjt:  STTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAYE

Query:  AVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNKQ
         VPGSDF+ITR AFRDNSSKYYIN R+SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGT KYVE IDE NKQ
Subjt:  AVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNKQ

AT5G62410.1 structural maintenance of chromosomes 29.9e-1732.07Show/hide
Query:  LFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIV-DLDDGAYEAVP
        + IKE+ L  FKSYA    V  F   F+A+ G NGSGKSN++D++ FV G    +Q+R   + EL++       +  A+VSV F           YE  P
Subjt:  LFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIV-DLDDGAYEAVP

Query:  GSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKY
          +  +TR       +KY IN + +  ++V        ++++N  FLI+QG + ++  MKP          L  LE+  GT  Y
Subjt:  GSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCACCGAACCTGTGGATGACCTGATGCCCCAAACCGCGAATTCTACCAATGGAGCTTCCACAACTCCCAGGCTTTTCATTAAGGAAATGGTTTTGTCCAACTT
CAAGTCCTACGCTGGTGAACAACGGGTTGGACCCTTCCATAAGAGTTTCTCTGCAGTGGTTGGACCCAATGGCAGTGGAAAAAGTAATGTAATTGATGCCATGTTATTTG
TCTTCGGAAAGCGAGCTAAACAGATGCGACTCAACAAAGTTTCGGAGCTAATTCATAATTCTACCAATCACCAGAATTTAGAGAGTGCAAGTGTTTCAGTTCACTTCCAA
GAAATAGTTGATCTGGATGATGGAGCATATGAAGCTGTTCCAGGAAGTGACTTTGTTATAACCCGGGCTGCCTTTCGTGATAACTCTTCTAAATATTACATTAATAATCG
TGCAAGTAACTTCACTGAAGTTACCAAAAAATTGAAGGGTAAAGGAGTTGACTTGGACAACAATCGCTTTTTAATTCTTCAGGGTGAAGTGGAGCAGATTTCACTGATGA
AGCCAAAAGCTCAAGGACCTCATGATGAGGGCTTTCTTGAATATCTTGAGGATATAATCGGAACCATCAAATATGTTGAAATGATTGACGAGTCAAACAAGCAGTGA
mRNA sequenceShow/hide mRNA sequence
CTAAAGTGAAACAAACTTGTTCGCTCTCTCTTCTCTTCTCTTTTCTTCTACGTCCTCAACCTCAATTCTCTCAATTGCACGACGAAACTGCAACCCATTTCCACTTCTCC
TCAACCAATTACCAAACATTCATCAATTCATCTCTCAATCACCTAATTCACCATCTTCTTACCCCTAATTCCTGTTTTTCTTCTTTTAAGGATATATCTTCTTACTTCCA
CCTACCCTTTCACCTCCGATTCCTTCACCCTCCCTTCACTCAAAGGATCTACTTCCATTTCCCTTCCATTCCACCTTTCTCATTCGTTTCACCCATTTCTTCTCCCAAAT
GGATTCCACCGAACCTGTGGATGACCTGATGCCCCAAACCGCGAATTCTACCAATGGAGCTTCCACAACTCCCAGGCTTTTCATTAAGGAAATGGTTTTGTCCAACTTCA
AGTCCTACGCTGGTGAACAACGGGTTGGACCCTTCCATAAGAGTTTCTCTGCAGTGGTTGGACCCAATGGCAGTGGAAAAAGTAATGTAATTGATGCCATGTTATTTGTC
TTCGGAAAGCGAGCTAAACAGATGCGACTCAACAAAGTTTCGGAGCTAATTCATAATTCTACCAATCACCAGAATTTAGAGAGTGCAAGTGTTTCAGTTCACTTCCAAGA
AATAGTTGATCTGGATGATGGAGCATATGAAGCTGTTCCAGGAAGTGACTTTGTTATAACCCGGGCTGCCTTTCGTGATAACTCTTCTAAATATTACATTAATAATCGTG
CAAGTAACTTCACTGAAGTTACCAAAAAATTGAAGGGTAAAGGAGTTGACTTGGACAACAATCGCTTTTTAATTCTTCAGGGTGAAGTGGAGCAGATTTCACTGATGAAG
CCAAAAGCTCAAGGACCTCATGATGAGGGCTTTCTTGAATATCTTGAGGATATAATCGGAACCATCAAATATGTTGAAATGATTGACGAGTCAAACAAGCAGTGA
Protein sequenceShow/hide protein sequence
MDSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQ
EIVDLDDGAYEAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNKQ