CuGenDBv2

Gene ID	CSPI05G19360
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ty3/gypsy retrotransposon protein
Genome location	Chr5:20623910..20625488
RNA-Seq Expression	CSPI05G19360
Synteny	CSPI05G19360
Gene Ontology terms	NA
InterPro domains	IPR000477 - Reverse transcriptase domain IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ97017.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

3.9e-168

61.58

Show/hide

Query:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE
        MEISLKVLVKTWQ DDQGFLV+FRAMGIPKA+  LV T+++EE Q E  QLQ EF DVF MP+ LPPMR+IDHKIQLKEGT+PINVRPYRYPHAQKNEIE
Subjt:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE

Query:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY
                                   ++D      V + ALN ATV DKFPIPMIDELLDEL+ +S+FS+IDLKSGYHQIRVRDED+ KTAFRTHEGHY
Subjt:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY

Query:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA
        EFLVM FGLTNAPATFQALMNQVFRPYL KFLLVFFDDILVY++D   HL++LT+VFQLLRQH LF NR+KC FAKDRIEYL HWVSAKGVEADQEKI+A
Subjt:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA

Query:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI
        M+EWPIPKN+R  R  LG       F             + K+  F                                   TDASG GLGAVL+QNKRPI
Subjt:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI

Query:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN
        AYFSQ+LSETA+E+S+YERELMAI                              QREI+PG+QKW+MKLIGFDFEI YRAG ENK ADALSR+P E +LN
Subjt:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN

Query:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV
         I+VPSLLD+  +EKEVQ DEKLK IFDR+V
Subjt:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

TYK10423.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

8.8e-168

61.39

Show/hide

Query:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE
        MEISLKVLVKTWQ DDQGFLV+FRAMGIPKA+  LV T+++EE Q E  QLQ EF DVF MP+ LPPMR+IDH+IQLKEGT+PINVRPYRYPHAQKNEIE
Subjt:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE

Query:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY
                                   ++D      V + ALN ATV DKFPIPMIDELLDEL+ +S+FS+IDLKSGYHQIRVRDED+ KTAFRTHEGHY
Subjt:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY

Query:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA
        EFLVM FGLTNAPATFQALMNQVFRPYL KFLLVFFDDILVY++D   HL++LT+VFQLLRQH LF NR+KC FAKDRIEYL HWVSAKGVEADQEKI+A
Subjt:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA

Query:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI
        M+EWPIPKN+R  R  LG       F             + K+  F                                   TDASG GLGAVL+QNKRPI
Subjt:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI

Query:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN
        AYFSQ+LSETA+E+S+YERELMAI                              QREI+PG+QKW+MKLIGFDFEI YRAG ENK ADALSR+P E +LN
Subjt:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN

Query:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV
         I+VPSLLD+  +EKEVQ DEKLK IFDR+V
Subjt:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

TYK21209.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

3.0e-168

61.58

Show/hide

Query:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE
        MEISLKVLVKTWQ DDQGFLV+FRAMGIPKA+  LV T+++EE Q E  QLQ EF DVF MP+ LPPMR+IDH+IQLKEGT+PINVRPYRYPHAQKNEIE
Subjt:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE

Query:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY
                                   ++D      V + ALN ATV DKFPIPMIDELLDEL+ +S+FS+IDLKSGYHQIRVRDED+ KTAFRTHEGHY
Subjt:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY

Query:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA
        EFLVM FGLTNAPATFQALMNQVFRPYL KFLLVFFDDILVY++D   HL++LT+VFQLLRQH LF NR+KC FAKDRIEYL HWVSAKGVEADQEKI+A
Subjt:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA

Query:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI
        M+EWPIPKN+R  R  LG       F             + K+  F                                   TDASG GLGAVL+QNKRPI
Subjt:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI

Query:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN
        AYFSQ+LSETA+E+S+YERELMAI                              QREI+PG+QKW+MKLIGFDFEI YRAG ENK ADALSR+P EA+LN
Subjt:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN

Query:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV
         I+VPSLLD+  +EKEVQ DEKLK IFDR+V
Subjt:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

TYK23724.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

3.0e-168

61.58

Show/hide

Query:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE
        MEISLKVLVKTWQ DDQGFLV+FRAMGIPKA+  LV T+++EE Q E  QLQ EF DVF MP+ LPPMR+IDH+IQLKEGT+PINVRPYRYPHAQKNEIE
Subjt:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE

Query:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY
                                   ++D      V + ALN ATV DKFPIPMIDELLDEL+ +S+FS+IDLKSGYHQIRVRDED+ KTAFRTHEGHY
Subjt:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY

Query:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA
        EFLVM FGLTNAPATFQALMNQVFRPYL KFLLVFFDDILVY++D   HL++LT+VFQLLRQH LF NR+KC FAKDRIEYL HWVSAKGVEADQEKI+A
Subjt:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA

Query:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI
        M+EWPIPKN+R  R  LG       F             + K+  F                                   TDASG GLGAVL+QNKRPI
Subjt:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI

Query:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN
        AYFSQ+LSETA+E+S+YERELMAI                              QREI+PG+QKW+MKLIGFDFEI YRAG ENK ADALSR+P EA+LN
Subjt:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN

Query:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV
         I+VPSLLD+  +EKEVQ DEKLK IFDR+V
Subjt:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

TYK26407.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

3.0e-168

61.58

Show/hide

Query:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE
        MEISLKVLVKTWQ DDQGFLV+FRAMGIPKA+  LV T+++EE Q E  QLQ EF DVF MP+ LPPMR+IDH+IQLKEGT+PINVRPYRYPHAQKNEIE
Subjt:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE

Query:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY
                                   ++D      V + ALN ATV DKFPIPMIDELLDEL+ +S+FS+IDLKSGYHQIRVRDED+ KTAFRTHEGHY
Subjt:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY

Query:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA
        EFLVM FGLTNAPATFQALMNQVFRPYL KFLLVFFDDILVY++D   HL++LT+VFQLLRQH LF NR+KC FAKDRIEYL HWVSAKGVEADQEKI+A
Subjt:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA

Query:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI
        M+EWPIPKN+R  R  LG       F             + K+  F                                   TDASG GLGAVL+QNKRPI
Subjt:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI

Query:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN
        AYFSQ+LSETA+E+S+YERELMAI                              QREI+PG+QKW+MKLIGFDFEI YRAG ENK ADALSR+P EA+LN
Subjt:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN

Query:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV
         I+VPSLLD+  +EKEVQ DEKLK IFDR+V
Subjt:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BD16 Ty3/gypsy retrotransposon protein

1.9e-168

61.58

Show/hide

Query:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE
        MEISLKVLVKTWQ DDQGFLV+FRAMGIPKA+  LV T+++EE Q E  QLQ EF DVF MP+ LPPMR+IDHKIQLKEGT+PINVRPYRYPHAQKNEIE
Subjt:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE

Query:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY
                                   ++D      V + ALN ATV DKFPIPMIDELLDEL+ +S+FS+IDLKSGYHQIRVRDED+ KTAFRTHEGHY
Subjt:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY

Query:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA
        EFLVM FGLTNAPATFQALMNQVFRPYL KFLLVFFDDILVY++D   HL++LT+VFQLLRQH LF NR+KC FAKDRIEYL HWVSAKGVEADQEKI+A
Subjt:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA

Query:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI
        M+EWPIPKN+R  R  LG       F             + K+  F                                   TDASG GLGAVL+QNKRPI
Subjt:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI

Query:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN
        AYFSQ+LSETA+E+S+YERELMAI                              QREI+PG+QKW+MKLIGFDFEI YRAG ENK ADALSR+P E +LN
Subjt:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN

Query:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV
         I+VPSLLD+  +EKEVQ DEKLK IFDR+V
Subjt:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

A0A5D3CEX8 Ty3/gypsy retrotransposon protein

4.3e-168

61.39

Show/hide

Query:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE
        MEISLKVLVKTWQ DDQGFLV+FRAMGIPKA+  LV T+++EE Q E  QLQ EF DVF MP+ LPPMR+IDH+IQLKEGT+PINVRPYRYPHAQKNEIE
Subjt:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE

Query:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY
                                   ++D      V + ALN ATV DKFPIPMIDELLDEL+ +S+FS+IDLKSGYHQIRVRDED+ KTAFRTHEGHY
Subjt:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY

Query:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA
        EFLVM FGLTNAPATFQALMNQVFRPYL KFLLVFFDDILVY++D   HL++LT+VFQLLRQH LF NR+KC FAKDRIEYL HWVSAKGVEADQEKI+A
Subjt:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA

Query:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI
        M+EWPIPKN+R  R  LG       F             + K+  F                                   TDASG GLGAVL+QNKRPI
Subjt:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI

Query:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN
        AYFSQ+LSETA+E+S+YERELMAI                              QREI+PG+QKW+MKLIGFDFEI YRAG ENK ADALSR+P E +LN
Subjt:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN

Query:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV
         I+VPSLLD+  +EKEVQ DEKLK IFDR+V
Subjt:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

A0A5D3DD68 Ty3/gypsy retrotransposon protein

1.5e-168

61.58

Show/hide

Query:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE
        MEISLKVLVKTWQ DDQGFLV+FRAMGIPKA+  LV T+++EE Q E  QLQ EF DVF MP+ LPPMR+IDH+IQLKEGT+PINVRPYRYPHAQKNEIE
Subjt:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE

Query:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY
                                   ++D      V + ALN ATV DKFPIPMIDELLDEL+ +S+FS+IDLKSGYHQIRVRDED+ KTAFRTHEGHY
Subjt:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY

Query:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA
        EFLVM FGLTNAPATFQALMNQVFRPYL KFLLVFFDDILVY++D   HL++LT+VFQLLRQH LF NR+KC FAKDRIEYL HWVSAKGVEADQEKI+A
Subjt:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA

Query:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI
        M+EWPIPKN+R  R  LG       F             + K+  F                                   TDASG GLGAVL+QNKRPI
Subjt:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI

Query:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN
        AYFSQ+LSETA+E+S+YERELMAI                              QREI+PG+QKW+MKLIGFDFEI YRAG ENK ADALSR+P EA+LN
Subjt:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN

Query:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV
         I+VPSLLD+  +EKEVQ DEKLK IFDR+V
Subjt:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

A0A5D3DJA9 Ty3/gypsy retrotransposon protein

1.5e-168

61.58

Show/hide

Query:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE
        MEISLKVLVKTWQ DDQGFLV+FRAMGIPKA+  LV T+++EE Q E  QLQ EF DVF MP+ LPPMR+IDH+IQLKEGT+PINVRPYRYPHAQKNEIE
Subjt:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE

Query:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY
                                   ++D      V + ALN ATV DKFPIPMIDELLDEL+ +S+FS+IDLKSGYHQIRVRDED+ KTAFRTHEGHY
Subjt:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY

Query:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA
        EFLVM FGLTNAPATFQALMNQVFRPYL KFLLVFFDDILVY++D   HL++LT+VFQLLRQH LF NR+KC FAKDRIEYL HWVSAKGVEADQEKI+A
Subjt:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA

Query:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI
        M+EWPIPKN+R  R  LG       F             + K+  F                                   TDASG GLGAVL+QNKRPI
Subjt:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI

Query:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN
        AYFSQ+LSETA+E+S+YERELMAI                              QREI+PG+QKW+MKLIGFDFEI YRAG ENK ADALSR+P EA+LN
Subjt:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN

Query:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV
         I+VPSLLD+  +EKEVQ DEKLK IFDR+V
Subjt:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

A0A5D3DRT3 Ty3/gypsy retrotransposon protein

1.5e-168

61.58

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Query:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE
        MEISLKVLVKTWQ DDQGFLV+FRAMGIPKA+  LV T+++EE Q E  QLQ EF DVF MP+ LPPMR+IDH+IQLKEGT+PINVRPYRYPHAQKNEIE
Subjt:  MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIE

Query:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY
                                   ++D      V + ALN ATV DKFPIPMIDELLDEL+ +S+FS+IDLKSGYHQIRVRDED+ KTAFRTHEGHY
Subjt:  N------------------------TGERD------VGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHY

Query:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA
        EFLVM FGLTNAPATFQALMNQVFRPYL KFLLVFFDDILVY++D   HL++LT+VFQLLRQH LF NR+KC FAKDRIEYL HWVSAKGVEADQEKI+A
Subjt:  EFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRA

Query:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI
        M+EWPIPKN+R  R  LG       F             + K+  F                                   TDASG GLGAVL+QNKRPI
Subjt:  MLEWPIPKNVRITR-VLGFNWLLLTFCGKLWCYRHSPNSIDKEKQF----------------------------------PTDASGFGLGAVLSQNKRPI

Query:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN
        AYFSQ+LSETA+E+S+YERELMAI                              QREI+PG+QKW+MKLIGFDFEI YRAG ENK ADALSR+P EA+LN
Subjt:  AYFSQRLSETAKERSIYERELMAI------------------------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLN

Query:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV
         I+VPSLLD+  +EKEVQ DEKLK IFDR+V
Subjt:  VISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

SwissProt top hits

e value

%identity

Alignment

P04323 Retrovirus-related Pol polyprotein from transposon 17.6

1.9e-48

34.95

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Query:  LKEGTNPINVRPYRYPHAQKNEIENTGERDVGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHYEFLVML
        ++   +P N   +  P  Q    +      + +  LN  TV D+ PIP +DE+L +L   + F+ IDL  G+HQI +  E V KTAF T  GHYE+L M 
Subjt:  LKEGTNPINVRPYRYPHAQKNEIENTGERDVGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHYEFLVML

Query:  FGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRAMLEWPI
        FGL NAPATFQ  MN + RP L+K  LV+ DDI+V++     HL+ L LVF+ L + +L     KC+F K    +L H ++  G++ + EKI A+ ++PI
Subjt:  FGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRAMLEWPI

Query:  P-KNVRITRVLGFNWLLLTF------------------------------CGKLWCYRHSPNSIDKEKQF------PTDASGFGLGAVLSQNKRPIAYFS
        P K   I   LG       F                                K   Y  S + I K   F       TDAS   LGAVLSQ+  P++Y S
Subjt:  P-KNVRITRVLGFNWLLLTF------------------------------CGKLWCYRHSPNSIDKEKQF------PTDASGFGLGAVLSQNKRPIAYFS

Query:  QRLSETAKERSIYERELMAIQ------REILPG------------------------IQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVE
        + L+E     S  E+EL+AI       R  L G                        + +W +KL  FDF+I Y  G EN VADALSRI +E
Subjt:  QRLSETAKERSIYERELMAIQ------REILPG------------------------IQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVE

P20825 Retrovirus-related Pol polyprotein from transposon 297

3.8e-49

33.67

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Query:  LKEGTNPINVRPYRYPHAQKNEIENTGERDVGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHYEFLVML
        ++E  +P N   +  P        N     + +  LN  T+ D++PIP +DE+L +L     F+ IDL  G+HQI + +E + KTAF T  GHYE+L M 
Subjt:  LKEGTNPINVRPYRYPHAQKNEIENTGERDVGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHYEFLVML

Query:  FGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRAMLEWPI
        FGL NAPATFQ  MN + RP L+K  LV+ DDI++++     HL  + LVF  L   +L     KC+F K    +L H V+  G++ +  K++A++ +PI
Subjt:  FGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRAMLEWPI

Query:  P-KNVRITRVLGFNWLL-------------LTFCGK------------LWCYRHSPNSI---------DKEKQF--PTDASGFGLGAVLSQNKRPIAYFS
        P K+  I   LG                  +T C K            +  +      I         D EK+F   TDAS   LGAVLSQN  PI++ S
Subjt:  P-KNVRITRVLGFNWLL-------------LTFCGK------------LWCYRHSPNSI---------DKEKQF--PTDASGFGLGAVLSQNKRPIAYFS

Query:  QRLSETAKERSIYERELMAI------------QREIL----------------PG--IQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVE
        + L++     S  E+EL+AI             R+ L                PG  +++W ++L  + F+I Y  G EN VADALSRI +E
Subjt:  QRLSETAKERSIYERELMAI------------QREIL----------------PG--IQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVE

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

5.0e-41

29.14

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Query:  LQNEFEDVFVMPNRLPPMR------QIDHKIQLKEGTNPINVRPYRYPHAQKNEI------------------------------ENTGERDVGFGALNW
        LQ ++ +  ++ N LPP         + H I++K G     ++PY      + EI                              + T    V +  LN 
Subjt:  LQNEFEDVFVMPNRLPPMR------QIDHKIQLKEGTNPINVRPYRYPHAQKNEI------------------------------ENTGERDVGFGALNW

Query:  ATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHYEFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNK
        AT+SD FP+P ID LL  +  + +F+ +DL SGYHQI +  +D  KTAF T  G YE+ VM FGL NAP+TF   M   FR    +F+ V+ DDIL++++
Subjt:  ATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHYEFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNK

Query:  DALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRAMLEWPIPKNVR-ITRVLG-FNW--------------LLLTFCGK
            H K+L  V + L+  +L   +KKC+FA +  E+L + +  + +   Q K  A+ ++P PK V+   R LG  N+              + L  C K
Subjt:  DALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRAMLEWPIPKNVR-ITRVLG-FNW--------------LLLTFCGK

Query:  LWCYRHSPNSIDKEK------------------QFPTDASGFGLGAVLSQ--NKRP----IAYFSQRLSETAKERSIYERELMAI---------------
                 +I+K K                  +  TDAS  G+GAVL +  NK      + YFS+ L    K     E EL+ I               
Subjt:  LWCYRHSPNSIDKEK------------------QFPTDASGFGLGAVLSQ--NKRP----IAYFSQRLSETAKERSIYERELMAI---------------

Query:  ---------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSR
                       + E    +Q+W+  L  +DF + Y AG +N VADA+SR
Subjt:  ---------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus

1.7e-44

30.88

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Query:  RQIDHKIQ---LKEGTNPINVRPYRYPHAQKNEIENTGERDVGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRT
        RQID  +Q   ++   +P N   +  P   K   E      V F  LN  T+ D +PIP I+  L  L  +  F+ +DL SG+HQI +++ D+ KTAF T
Subjt:  RQIDHKIQ---LKEGTNPINVRPYRYPHAQKNEIENTGERDVGFGALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRT

Query:  HEGHYEFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQ
          G YEFL + FGL NAPA FQ +++ + R ++ K   V+ DDI+V+++D   H K L LV   L + +L  N +K  F   ++E+L + V+A G++AD 
Subjt:  HEGHYEFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQ

Query:  EKIRAMLEWPIPKNVR-ITRVLGFNWLLLTFC---------------GKLWCYRHSPNS-------------------------------IDKEKQFPTD
        +K+RA+ E P P +V+ + R LG       F                G     + S +S                                 K     TD
Subjt:  EKIRAMLEWPIPKNVR-ITRVLGFNWLLLTFC---------------GKLWCYRHSPNS-------------------------------IDKEKQFPTD

Query:  ASGFGLGAVLSQN----KRPIAYFSQRLSETAKERSIYERELMAI-------------------------------QREILPGIQKWMMKLIGFDFEIFY
        AS + +GAVLSQ+     RPIAY S+ L++T +  +  E+E++AI                                R     +++W  ++  ++ E+ Y
Subjt:  ASGFGLGAVLSQN----KRPIAYFSQRLSETAKERSIYERELMAI-------------------------------QREILPGIQKWMMKLIGFDFEIFY

Query:  RAGSENKVADALSRIPVEAQLNVISVPSLLDLEA
        + G  N VADALSRIP   QLN +S     DL+A
Subjt:  RAGSENKVADALSRIPVEAQLNVISVPSLLDLEA

Q99315 Transposon Ty3-G Gag-Pol polyprotein

1.7e-41

29.36

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Query:  LQNEFEDVFVMPNRLPPMR------QIDHKIQLKEGTNPINVRPYRYPHAQKNEI------------------------------ENTGERDVGFGALNW
        LQ ++ +  ++ N LPP         + H I++K G     ++PY      + EI                              + T    V +  LN 
Subjt:  LQNEFEDVFVMPNRLPPMR------QIDHKIQLKEGTNPINVRPYRYPHAQKNEI------------------------------ENTGERDVGFGALNW

Query:  ATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHYEFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNK
        AT+SD FP+P ID LL  +  + +F+ +DL SGYHQI +  +D  KTAF T  G YE+ VM FGL NAP+TF   M   FR    +F+ V+ DDIL++++
Subjt:  ATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHYEFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNK

Query:  DALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRAMLEWPIPKNVR-ITRVLG-FNW--------------LLLTFCGK
            H K+L  V + L+  +L   +KKC+FA +  E+L + +  + +   Q K  A+ ++P PK V+   R LG  N+              + L  C K
Subjt:  DALAHLKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRAMLEWPIPKNVR-ITRVLG-FNW--------------LLLTFCGK

Query:  LWCYRHSPNSIDKEK------------------QFPTDASGFGLGAVLSQ--NKRP----IAYFSQRLSETAKERSIYERELMAI---------------
                 +IDK K                  +  TDAS  G+GAVL +  NK      + YFS+ L    K     E EL+ I               
Subjt:  LWCYRHSPNSIDKEK------------------QFPTDASGFGLGAVLSQ--NKRP----IAYFSQRLSETAKERSIYERELMAI---------------

Query:  ---------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSR
                       + E    +Q+W+  L  +DF + Y AG +N VADA+SR
Subjt:  ---------------QREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSR

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.4e-09

43.66

Show/hide

Query:  LKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLD--HWVSAKGVEADQEKIRAMLEWPIPKNVRITRVLGF
        + +L +V Q+  QH  + NRKKC F + +I YL   H +S +GV AD  K+ AM+ WP PKN   T + GF
Subjt:  LKYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLD--HWVSAKGVEADQEKIRAMLEWPIPKNVRITRVLGF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAATATCCTTGAAGGTGCTGGTTAAAACGTGGCAACTGGATGATCAAGGTTTTTTAGTTGATTTCAGAGCTATGGGAATTCCGAAGGCTAATTGGATGTTGGTGGC
AACAGAATCAATGGAAGAAATACAACCCGAAATTGAACAACTCCAAAATGAATTCGAAGATGTATTTGTTATGCCAAACAGGCTGCCCCCAATGCGACAGATTGACCACA
AAATCCAATTGAAGGAAGGTACCAATCCCATTAATGTAAGGCCATATCGTTACCCACACGCCCAGAAAAATGAGATCGAAAACACTGGTGAACGAGATGTTGGCTTCGGG
GCTTTGAATTGGGCTACAGTATCTGACAAGTTCCCAATTCCGATGATTGATGAGCTGTTGGATGAGTTGAATTGCTCAAGTGTTTTCTCCGAGATAGACTTGAAGTCGGG
TTACCATCAAATCCGGGTACGAGATGAAGATGTAAGGAAGACGGCCTTCAGAACACATGAGGGTCATTACGAGTTTCTTGTTATGTTGTTCGGCCTTACGAACGCTCCGG
CGACATTCCAAGCTCTAATGAATCAGGTTTTTAGACCCTACTTGCATAAATTCTTGCTGGTATTTTTTGATGATATTTTGGTTTACAACAAAGATGCATTAGCCCATTTA
AAGTACCTCACCTTGGTGTTTCAATTACTTCGGCAACATAGCCTATTCGATAATCGAAAGAAGTGCCAGTTTGCAAAAGACCGGATTGAGTACTTGGATCACTGGGTTTC
AGCAAAAGGAGTTGAAGCTGATCAGGAGAAGATTAGAGCTATGCTGGAATGGCCAATTCCGAAAAATGTGAGAATTACGAGGGTTCTTGGGTTTAACTGGTTACTACTGA
CGTTTTGTGGCAAATTATGGTGCTATCGCCACTCCCCTAACTCGATTGACAAAGAAAAACAGTTTCCAACGGATGCTTCAGGGTTCGGTCTTGGCGCAGTTTTATCACAG
AATAAGAGACCCATTGCATACTTTAGCCAGAGACTATCAGAGACAGCCAAAGAAAGATCTATTTATGAGAGAGAGCTAATGGCAATCCAAAGGGAGATTTTACCAGGCAT
TCAGAAATGGATGATGAAATTGATCGGCTTCGATTTTGAAATCTTTTATCGGGCGGGATCGGAGAACAAGGTAGCCGATGCACTTTCGCGGATTCCGGTGGAGGCACAGT
TGAATGTGATTAGCGTGCCCTCCTTGTTGGATCTTGAGGCAGTTGAGAAAGAAGTCCAAGAGGATGAGAAGCTGAAAAATATATTTGACCGAGTGGTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEISLKVLVKTWQLDDQGFLVDFRAMGIPKANWMLVATESMEEIQPEIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRYPHAQKNEIENTGERDVGFG
ALNWATVSDKFPIPMIDELLDELNCSSVFSEIDLKSGYHQIRVRDEDVRKTAFRTHEGHYEFLVMLFGLTNAPATFQALMNQVFRPYLHKFLLVFFDDILVYNKDALAHL
KYLTLVFQLLRQHSLFDNRKKCQFAKDRIEYLDHWVSAKGVEADQEKIRAMLEWPIPKNVRITRVLGFNWLLLTFCGKLWCYRHSPNSIDKEKQFPTDASGFGLGAVLSQ
NKRPIAYFSQRLSETAKERSIYERELMAIQREILPGIQKWMMKLIGFDFEIFYRAGSENKVADALSRIPVEAQLNVISVPSLLDLEAVEKEVQEDEKLKNIFDRVV

CSPI05G19360 (gene) of Cucumber (PI 183967) v1 genome