; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G19390 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G19390
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionF-box protein SKIP28
Genome locationChr5:20634873..20636500
RNA-Seq ExpressionCSPI05G19390
SyntenyCSPI05G19390
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046341.1 F-box protein SKIP28 isoform X1 [Cucumis melo var. makuwa]5.2e-16893.16Show/hide
Query:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG
        MSENQEPPNPA+VAEAGPPHEALFHV+SYL LFELLS+SAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKA GRLRTLALI+CFKISDSG
Subjt:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG

Query:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV
        LHEVVENNPLLTKLYVPGCTSLTP GVVRAVKT SQ SHNLKNLMIGGIYNIEN HLEVLRSHLLENRS NKQQEWRQVHHLYHEHVDRP LLS+DFLP+
Subjt:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV

Query:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNVSSSTAGFV
        IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCI C+PRCEECGGCVD DEIEEAIC  I+CSSCW QLPKCNHCNRPYCKRHRDNVSSSTAGFV
Subjt:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNVSSSTAGFV

Query:  CEICLET
        CEICLET
Subjt:  CEICLET

XP_004150124.1 F-box protein SKIP28 [Cucumis sativus]3.8e-19599.4Show/hide
Query:  MAGPESSVAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSD
        MAGPESSVAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVAEAGPPHEALFHVM+YLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSD
Subjt:  MAGPESSVAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSD

Query:  YTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN
        YTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN
Subjt:  YTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN

Query:  KQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCW
        KQQEWRQVHHLYHEHVDRP+LLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCW
Subjt:  KQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCW

Query:  FQLPKCNHCNRPYCKRHRDNVSSSTAGFVCEICLET
        FQLPKCNHCNRPYCKRHRDNVSSSTAGFVCEICLET
Subjt:  FQLPKCNHCNRPYCKRHRDNVSSSTAGFVCEICLET

XP_008467113.1 PREDICTED: F-box protein SKIP28 isoform X2 [Cucumis melo]4.9e-15892.78Show/hide
Query:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG
        MSENQEPPNPA+VAEAGPPHEALFHV+SYL LFELLS+SAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKA GRLRTLALI+CFKISDSG
Subjt:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG

Query:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV
        LHEVVENNPLLTKLYVPGCTSLTP GVVRAVKT SQ SHNLKNLMIGGIYNIEN HLEVLRSHLLENRS NKQQEWRQVHHLYHEHVDRP LLS+DFLP+
Subjt:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV

Query:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN
        IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCI C+PRCEECGGCVD DEIEEAIC  I+CSSCW QLPKCNHCNRPYCKRHRDN
Subjt:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN

XP_016903294.1 PREDICTED: F-box protein SKIP28 isoform X1 [Cucumis melo]2.2e-15892.47Show/hide
Query:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG
        MSENQEPPNPA+VAEAGPPHEALFHV+SYL LFELLS+SAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKA GRLRTLALI+CFKISDSG
Subjt:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG

Query:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV
        LHEVVENNPLLTKLYVPGCTSLTP GVVRAVKT SQ SHNLKNLMIGGIYNIEN HLEVLRSHLLENRS NKQQEWRQVHHLYHEHVDRP LLS+DFLP+
Subjt:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV

Query:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNV
        IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCI C+PRCEECGGCVD DEIEEAIC  I+CSSCW QLPKCNHCNRPYCKRHRDN+
Subjt:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNV

XP_038906463.1 F-box protein SKIP28 [Benincasa hispida]1.8e-16082.61Show/hide
Query:  MAGPESSVAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVA---------EAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVD
        M GPESS AKELG S TSAAEK+DE++T+MSENQEP NPA+ A         EAGPPHEALF V+SYLPLFELLS+S+VCVSLRDAVEHDVLPWLHIVVD
Subjt:  MAGPESSVAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVA---------EAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVD

Query:  GRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRS
         RLSSRLSDY LGRIARKA GRLRTLALINCFKISDSG HEVVE NPLLTKLYVPGCTSLTP GVVRAVKTLSQ SHNLK+LMIGGIYNIEN+HLEVL+ 
Subjt:  GRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRS

Query:  HLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAIC
        HLLENRSL +QQE RQ HHLY EH+DR KLLS++F PVIDVQICPKC +IR+VYDCSRERCKIKQ + LLADCRGCI CIPRCEECGGCVDDDEIEEA+C
Subjt:  HLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAIC

Query:  SDILCSSCWFQLPKCNHCNRPYCKRHRDNVSSSTAGFVCEICLET
        + ILCSSCW QLPKCNHCNRPYC RH  NVSSST GFVCEICLET
Subjt:  SDILCSSCWFQLPKCNHCNRPYCKRHRDNVSSSTAGFVCEICLET

TrEMBL top hitse value%identityAlignment
A0A0A0KSU6 F-box domain-containing protein1.8e-19599.4Show/hide
Query:  MAGPESSVAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSD
        MAGPESSVAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVAEAGPPHEALFHVM+YLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSD
Subjt:  MAGPESSVAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSD

Query:  YTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN
        YTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN
Subjt:  YTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN

Query:  KQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCW
        KQQEWRQVHHLYHEHVDRP+LLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCW
Subjt:  KQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCW

Query:  FQLPKCNHCNRPYCKRHRDNVSSSTAGFVCEICLET
        FQLPKCNHCNRPYCKRHRDNVSSSTAGFVCEICLET
Subjt:  FQLPKCNHCNRPYCKRHRDNVSSSTAGFVCEICLET

A0A1S3CSR5 F-box protein SKIP28 isoform X22.4e-15892.78Show/hide
Query:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG
        MSENQEPPNPA+VAEAGPPHEALFHV+SYL LFELLS+SAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKA GRLRTLALI+CFKISDSG
Subjt:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG

Query:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV
        LHEVVENNPLLTKLYVPGCTSLTP GVVRAVKT SQ SHNLKNLMIGGIYNIEN HLEVLRSHLLENRS NKQQEWRQVHHLYHEHVDRP LLS+DFLP+
Subjt:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV

Query:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN
        IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCI C+PRCEECGGCVD DEIEEAIC  I+CSSCW QLPKCNHCNRPYCKRHRDN
Subjt:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN

A0A1S4E4Z1 F-box protein SKIP28 isoform X11.1e-15892.47Show/hide
Query:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG
        MSENQEPPNPA+VAEAGPPHEALFHV+SYL LFELLS+SAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKA GRLRTLALI+CFKISDSG
Subjt:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG

Query:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV
        LHEVVENNPLLTKLYVPGCTSLTP GVVRAVKT SQ SHNLKNLMIGGIYNIEN HLEVLRSHLLENRS NKQQEWRQVHHLYHEHVDRP LLS+DFLP+
Subjt:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV

Query:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNV
        IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCI C+PRCEECGGCVD DEIEEAIC  I+CSSCW QLPKCNHCNRPYCKRHRDN+
Subjt:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNV

A0A5A7TYB5 F-box protein SKIP28 isoform X12.5e-16893.16Show/hide
Query:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG
        MSENQEPPNPA+VAEAGPPHEALFHV+SYL LFELLS+SAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKA GRLRTLALI+CFKISDSG
Subjt:  MSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSG

Query:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV
        LHEVVENNPLLTKLYVPGCTSLTP GVVRAVKT SQ SHNLKNLMIGGIYNIEN HLEVLRSHLLENRS NKQQEWRQVHHLYHEHVDRP LLS+DFLP+
Subjt:  LHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPV

Query:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNVSSSTAGFV
        IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCI C+PRCEECGGCVD DEIEEAIC  I+CSSCW QLPKCNHCNRPYCKRHRDNVSSSTAGFV
Subjt:  IDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNVSSSTAGFV

Query:  CEICLET
        CEICLET
Subjt:  CEICLET

A0A6J1IEZ1 F-box protein SKIP283.9e-12970.98Show/hide
Query:  MSENQEPPNPASVA---------EAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALI
        MSEN++ PN  +V           AGPPHEALF V+SYLPLFELLS+ AVCVSLRDAVEHDVLPWLH+VVD  LSSRL+DY LGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPASVA---------EAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALI

Query:  NCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPK
        NCFKISDS LHEVV+NNPLLTKLYVPGCTSLTPEGV+RAV+TLSQ SHNL +LMIGGIYNIEN+HLEVL+ +LL+NRS  +QQ+ +Q   LYH+ ++  K
Subjt:  NCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPK

Query:  LLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN
        LL ++ + +IDV++CPKC ++  VYDCSRERCKIKQ +   A+CRGC  C+PRCEECGGCVD DE EEA+C  +LC+SCW QLPKCNHCN+PYC RHR N
Subjt:  LLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN

Query:  V-SSSTAGFVCEICLET
        V SSS AGFVCE+C+ET
Subjt:  V-SSSTAGFVCEICLET

SwissProt top hitse value%identityAlignment
Q17R01 F-box/LRR-repeat protein 141.3e-0434.34Show/hide
Query:  LSLSAVCVSLRDAVEHDVLPWLHIVVDG-----RLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVR
        L LS + VS  D V    L ++   +DG       S  +SD  + R+ R+  G LRTL +  C +I+D GL  + E+   LT + + GCT +T  G+ R
Subjt:  LSLSAVCVSLRDAVEHDVLPWLHIVVDG-----RLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVR

Q8N1E6 F-box/LRR-repeat protein 141.3e-0434.34Show/hide
Query:  LSLSAVCVSLRDAVEHDVLPWLHIVVDG-----RLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVR
        L LS + VS  D V    L ++   +DG       S  +SD  + R+ R+  G LRTL +  C +I+D GL  + E+   LT + + GCT +T  G+ R
Subjt:  LSLSAVCVSLRDAVEHDVLPWLHIVVDG-----RLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVR

Q9LK24 F-box protein At3g272902.2e-2833.46Show/hide
Query:  GPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHI-VVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLY
        G  H+A   V+ YL L E+L++  VC SLRD+V  +   W  I + D  L  R++D +L ++ R+A G +R L L  C  I+D GL +V+ +NP LTKL 
Subjt:  GPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHI-VVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLY

Query:  VPGCTSLTPEGVVRAVKTL-SQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRN
        V GC  L+  G+V  ++ L S +   +K+L+ GG      +  + L   L  +  +  Q+  ++    ++        L  D   V D++ICP C     
Subjt:  VPGCTSLTPEGVVRAVKTL-SQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRN

Query:  VYDCSRERCKIK-QGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSC
        V+DC  + C +K Q     + CR C+ CI RC ECG C++D E  +  C    C  C
Subjt:  VYDCSRERCKIK-QGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSC

Q9LU91 F-box protein SKIP143.5e-3432.95Show/hide
Query:  HEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGC
        H A+   + +L   +LLS+S VC SL   V  D L W HI +   L+ ++++  L  +  +A G ++ L +++C +I+D  L  VV  N  + K+ VPGC
Subjt:  HEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGC

Query:  TSLTPEGVVRAVKTL-SQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDC
        T +T +G++  ++ L S     +K+L + G++ +   H + L   L  +   NK ++  Q    YH        +S D    +D+++CPKC + + VYDC
Subjt:  TSLTPEGVVRAVKTL-SQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDC

Query:  SRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPK
          E CK K+  +   +CR C  CI RC  CG C+ D E EE  C ++LC+ C    PK
Subjt:  SRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPK

Q9ZU90 F-box protein SKIP283.6e-5539.73Show/hide
Query:  HEALFHVMSYL-PLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPG
        HE L  V+ YL  LFELLS+  V  SLRDA+  +   W  +V++  LSSRL+D  L   + K++G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFHVMSYL-PLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPG

Query:  CTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDC
        C+ LTPEG++  V++LS+++H L+ L I G+     QHL  L ++                             LSS+    ID+++CPKC ++R +  C
Subjt:  CTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDC

Query:  SRERCKIKQGENLLADCRGCICCIPRCEECGGCV--DDDEIEEAIC--SDILCSSCWFQLPKCNHCNRPYCKRHRD-------NVSSSTAGFVCEIC
        SRE C  KQ +     CRGC  CIPRC EC  C+   D E +EA C   D+LC  CW  LPKC  CN+PYC  H           ++S   F CE C
Subjt:  SRERCKIKQGENLLADCRGCICCIPRCEECGGCV--DDDEIEEAIC--SDILCSSCWFQLPKCNHCNRPYCKRHRD-------NVSSSTAGFVCEIC

Arabidopsis top hitse value%identityAlignment
AT2G01620.1 RNI-like superfamily protein2.6e-5639.73Show/hide
Query:  HEALFHVMSYL-PLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPG
        HE L  V+ YL  LFELLS+  V  SLRDA+  +   W  +V++  LSSRL+D  L   + K++G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFHVMSYL-PLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPG

Query:  CTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDC
        C+ LTPEG++  V++LS+++H L+ L I G+     QHL  L ++                             LSS+    ID+++CPKC ++R +  C
Subjt:  CTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDC

Query:  SRERCKIKQGENLLADCRGCICCIPRCEECGGCV--DDDEIEEAIC--SDILCSSCWFQLPKCNHCNRPYCKRHRD-------NVSSSTAGFVCEIC
        SRE C  KQ +     CRGC  CIPRC EC  C+   D E +EA C   D+LC  CW  LPKC  CN+PYC  H           ++S   F CE C
Subjt:  SRERCKIKQGENLLADCRGCICCIPRCEECGGCV--DDDEIEEAIC--SDILCSSCWFQLPKCNHCNRPYCKRHRD-------NVSSSTAGFVCEIC

AT3G26000.1 Ribonuclease inhibitor2.5e-3532.95Show/hide
Query:  HEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGC
        H A+   + +L   +LLS+S VC SL   V  D L W HI +   L+ ++++  L  +  +A G ++ L +++C +I+D  L  VV  N  + K+ VPGC
Subjt:  HEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGC

Query:  TSLTPEGVVRAVKTL-SQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDC
        T +T +G++  ++ L S     +K+L + G++ +   H + L   L  +   NK ++  Q    YH        +S D    +D+++CPKC + + VYDC
Subjt:  TSLTPEGVVRAVKTL-SQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRNVYDC

Query:  SRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPK
          E CK K+  +   +CR C  CI RC  CG C+ D E EE  C ++LC+ C    PK
Subjt:  SRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPK

AT3G27290.1 RNI-like superfamily protein1.6e-2933.46Show/hide
Query:  GPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHI-VVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLY
        G  H+A   V+ YL L E+L++  VC SLRD+V  +   W  I + D  L  R++D +L ++ R+A G +R L L  C  I+D GL +V+ +NP LTKL 
Subjt:  GPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHI-VVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTKLY

Query:  VPGCTSLTPEGVVRAVKTL-SQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRN
        V GC  L+  G+V  ++ L S +   +K+L+ GG      +  + L   L  +  +  Q+  ++    ++        L  D   V D++ICP C     
Subjt:  VPGCTSLTPEGVVRAVKTL-SQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPKLLSSDFLPVIDVQICPKCYDIRN

Query:  VYDCSRERCKIK-QGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSC
        V+DC  + C +K Q     + CR C+ CI RC ECG C++D E  +  C    C  C
Subjt:  VYDCSRERCKIK-QGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGACCAGAATCATCCGTAGCTAAGGAATTGGGTTTTTCCCGCACATCGGCGGCAGAGAAGAAAGATGAAGAACTTACTTCCATGTCTGAGAATCAGGAACCGCC
AAATCCGGCGTCTGTGGCTGAAGCAGGGCCACCGCATGAGGCGTTGTTTCATGTTATGAGTTATCTTCCTCTCTTTGAGCTTCTTTCCCTGAGCGCAGTCTGTGTATCGC
TGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCGTCGTCGATGGGCGATTGAGCTCCCGGTTGTCCGATTACACTCTGGGGAGAATTGCCCGGAAGGCG
AGTGGCCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAACAATCCTCTTCTCACCAAGCTTTATGTACCCGG
ATGCACTAGTTTGACTCCTGAGGGAGTGGTTAGAGCAGTGAAGACTTTGTCCCAAGATTCTCACAATTTGAAGAATTTAATGATTGGTGGCATTTACAACATAGAGAACC
AACACCTTGAAGTCCTCAGATCCCATCTTCTTGAAAACCGATCACTGAACAAGCAGCAGGAGTGGCGACAGGTACACCATCTGTATCATGAGCACGTGGACCGGCCGAAG
TTGTTGAGTAGCGATTTCCTGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATAAGGAATGTCTATGATTGTTCAAGGGAGAGATGCAAGATAAAGCAAGG
AGAGAATTTGCTGGCAGATTGCCGGGGTTGCATTTGTTGCATTCCAAGGTGTGAAGAATGCGGCGGATGCGTGGATGATGATGAAATAGAAGAGGCTATATGTTCAGATA
TCTTGTGTTCAAGTTGCTGGTTTCAACTTCCCAAATGCAACCATTGTAATAGGCCATATTGCAAGCGACACCGTGATAATGTAAGTAGCTCTACTGCTGGGTTTGTTTGT
GAAATTTGTCTTGAAACATAA
mRNA sequenceShow/hide mRNA sequence
CCACCATTGATATTTGATTCTCTCAAAATTCTCAGTTCTCAATTTCATTTACCGCCATGGCCGGACCAGAATCATCCGTAGCTAAGGAATTGGGTTTTTCCCGCACATCG
GCGGCAGAGAAGAAAGATGAAGAACTTACTTCCATGTCTGAGAATCAGGAACCGCCAAATCCGGCGTCTGTGGCTGAAGCAGGGCCACCGCATGAGGCGTTGTTTCATGT
TATGAGTTATCTTCCTCTCTTTGAGCTTCTTTCCCTGAGCGCAGTCTGTGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCGTCGTCGATG
GGCGATTGAGCTCCCGGTTGTCCGATTACACTCTGGGGAGAATTGCCCGGAAGGCGAGTGGCCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCT
GGACTTCACGAAGTTGTTGAGAACAATCCTCTTCTCACCAAGCTTTATGTACCCGGATGCACTAGTTTGACTCCTGAGGGAGTGGTTAGAGCAGTGAAGACTTTGTCCCA
AGATTCTCACAATTTGAAGAATTTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAGATCCCATCTTCTTGAAAACCGATCACTGAACAAGC
AGCAGGAGTGGCGACAGGTACACCATCTGTATCATGAGCACGTGGACCGGCCGAAGTTGTTGAGTAGCGATTTCCTGCCAGTGATTGATGTACAAATCTGCCCAAAATGC
TATGACATAAGGAATGTCTATGATTGTTCAAGGGAGAGATGCAAGATAAAGCAAGGAGAGAATTTGCTGGCAGATTGCCGGGGTTGCATTTGTTGCATTCCAAGGTGTGA
AGAATGCGGCGGATGCGTGGATGATGATGAAATAGAAGAGGCTATATGTTCAGATATCTTGTGTTCAAGTTGCTGGTTTCAACTTCCCAAATGCAACCATTGTAATAGGC
CATATTGCAAGCGACACCGTGATAATGTAAGTAGCTCTACTGCTGGGTTTGTTTGTGAAATTTGTCTTGAAACATAATGGTTGAGTTGCCACATGAATTTGGATTAAAAT
TAGAAGCCATTGTTTGCTTTTTTTGTATCTTGCAAATGAACGTTGCAAGGCATGGCTGCAACAAATTATGCTTTGTTTGAACGAACTGTAAGTATAATGGGAAGTAGGTT
GAGTTGGTAAATTTGAAGTTAATCTGTGCATGTTATAAAGTT
Protein sequenceShow/hide protein sequence
MAGPESSVAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVAEAGPPHEALFHVMSYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKA
SGRLRTLALINCFKISDSGLHEVVENNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPK
LLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNVSSSTAGFVC
EICLET