; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G19460 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G19460
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHMG-Y-related protein A
Genome locationChr5:20713032..20714436
RNA-Seq ExpressionCSPI05G19460
SyntenyCSPI05G19460
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR000116 - High mobility group protein HMGA
IPR005818 - Linker histone H1/H5, domain H15
IPR017956 - AT hook, DNA-binding motif
IPR031059 - High mobility group protein HMGA, plant
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150116.1 HMG-Y-related protein A [Cucumis sativus]5.4e-98100Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC

XP_008466945.1 PREDICTED: HMG-Y-related protein A [Cucumis melo]7.0e-9899.46Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC

XP_022938491.1 HMG-Y-related protein A [Cucurbita moschata]9.8e-9292.47Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        M T+DQLNNPPQPPPPAPSLPHYPEMIM AI++LNDKNGVSK+AITKQIESTYGDLPPAFTTLL HHLDVMKQTG+LLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVV PPRPRGRPPKPKDPFAPISQPKKKT++GSGRPRGRPPK PKPAPTSAPPVAGPPRGRGRPPKVKPAVAP+GC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC

XP_023550058.1 HMG-Y-related protein A [Cucurbita pepo subsp. pepo]9.8e-9292.47Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        M T+DQLNNPPQPPPPAPSLPHYPEMIM AI++LNDKNGVSK+AITKQIESTYGDLPPAFTTLL HHLDVMKQTG+LLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVV PPRPRGRPPKPKDPFAPISQPKKKT++GSGRPRGRPPK PKPAPTSAPPVAGPPRGRGRPPKVKPAVAP+GC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC

XP_038906720.1 HMG-Y-related protein A-like [Benincasa hispida]6.1e-9496.77Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AI+SLNDKNGVSKSAITKQIESTYGDLPPAF+TLLTHHLDVMKQTGQLLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTT GSGRPRGRPPKYPKPAPTSA PVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC

TrEMBL top hitse value%identityAlignment
A0A0A0KPG4 H15 domain-containing protein2.6e-98100Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC

A0A1S3CSD8 HMG-Y-related protein A3.4e-9899.46Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC

A0A5D3E3W3 HMG-Y-related protein A3.4e-9899.46Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC

A0A6J1FDA7 HMG-Y-related protein A4.7e-9292.47Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        M T+DQLNNPPQPPPPAPSLPHYPEMIM AI++LNDKNGVSK+AITKQIESTYGDLPPAFTTLL HHLDVMKQTG+LLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVV PPRPRGRPPKPKDPFAPISQPKKKT++GSGRPRGRPPK PKPAPTSAPPVAGPPRGRGRPPKVKPAVAP+GC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC

A0A6J1I8X7 HMG-Y-related protein A-like6.8e-9191.94Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        MAT+DQLNNPPQPPPPAPSLPHYPEMIM AI++LND NGVSK+AITKQIES YGDLPPAFTTLL HHLDVMKQTG+LLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVV PPRPRGRPPKPKDPFAPISQPKKKT++GSGRPRGRPPK PKPAPTSAPPVAGPPRGRGRPPKVKPAVAP+GC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC

SwissProt top hitse value%identityAlignment
Q00423 HMG-Y-related protein A1.2e-4761.41Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP
        MAT++   N PQ      SLP YPEMI+  +++LN+ NG +KSAI+K IE+TYG+LP A  T+L  HL+ MK +G+L F +NNYMK DPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPV
        PKPK PLPPGTVVSPPRPRGRP  PKDP AP   PK K T GSGRPRGRP K P+    +AP      R RGRPPKVKP +  V
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPV

Q10370 HMG-Y-related protein B (Fragment)1.5e-3961.84Show/hide
Query:  SLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPI
        +LN+ +G +KSAI+K IE+TYG+LP    T+L  HL+ MK++G+L F +NNYMK DPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRP  PKDP AP 
Subjt:  SLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPI

Query:  SQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPV
          PK K T  +GRPRGRP K  +     +P      R RGRPPKVKP +  V
Subjt:  SQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPV

Q43386 HMG-Y-related protein A6.5e-4660.32Show/hide
Query:  PAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRPPKPK---------VP
        P+ SLP YP+MIM AI+SLNDKNG +K+ I K IEST   LPP+  TLL++HL+ MK+TGQL+ +KNNYMKPDP+APPKRGRGRPPK K           
Subjt:  PAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRPPKPK---------VP

Query:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPK------PAPTSAPPVAGPPRGRGRPPKVKP-AVAPVGC
        +   TVVS  PPR RGRPPKPKDP  P   P++K  +GSGRPRGRPPK P+       AP  A    G  RGRGRPPKVKP  VAPVGC
Subjt:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPK------PAPTSAPPVAGPPRGRGRPPKVKP-AVAPVGC

Q9FYS5 HMG-Y-related protein A1.1e-3451.78Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPD-PNAPPKRGRGR
        MATD+     P PP        YPEMI+AAI+ L+DK+G +KSAI+K IE  YG LPPA  +LLT HL  MK++G+L+F+KNNY +   P+APPKRGRGR
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPD-PNAPPKRGRGR

Query:  PPK---PKVPLP-PGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPK------PAPTSAPPVAGP-----PRGRGRPPKVKPAV
        PPK   P  P P P +  S  R RGRPPK K   +P+    K+ T+G  +PRGRPPK  K      P+P+ AP  AG       RGRGRPPKV+PAV
Subjt:  PPK---PKVPLP-PGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPK------PAPTSAPPVAGP-----PRGRGRPPKVKPAV

Q9M5W4 Histone H14.2e-0532.22Show/hide
Query:  SLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP---PKPKVPLPPGTVVSP
        S P + EMI  AI +L ++ G S+ AI K +E  +  LP  F  LL  HL  +  +G+L+ +KN++  P   A P     +    PKPKV   P T    
Subjt:  SLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP---PKPKVPLPPGTVVSP

Query:  PRPRGR---------PPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRP-PKVKPAVAPVG
         +P+ +           K      P ++PK KT   +G+P+    K  K A T+A  VA P + +  P  KVK   +P G
Subjt:  PRPRGR---------PPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRP-PKVKPAVAPVG

Arabidopsis top hitse value%identityAlignment
AT1G14900.1 high mobility group A4.6e-4760.32Show/hide
Query:  PAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRPPKPK---------VP
        P+ SLP YP+MIM AI+SLNDKNG +K+ I K IEST   LPP+  TLL++HL+ MK+TGQL+ +KNNYMKPDP+APPKRGRGRPPK K           
Subjt:  PAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRPPKPK---------VP

Query:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPK------PAPTSAPPVAGPPRGRGRPPKVKP-AVAPVGC
        +   TVVS  PPR RGRPPKPKDP  P   P++K  +GSGRPRGRPPK P+       AP  A    G  RGRGRPPKVKP  VAPVGC
Subjt:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPK------PAPTSAPPVAGPPRGRGRPPKVKP-AVAPVGC

AT1G48620.1 high mobility group A54.5e-1035.55Show/hide
Query:  ATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP-
        A   Q    P PP P+ S P Y +MI  AI +LN+ +G SK AI++ IE  Y  +P A   LLTHHL  +K +G L+ +K +Y       PP      P 
Subjt:  ATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRP-

Query:  --------------PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQP---KKKTTSGSGRPRGR-------PPKYP--KPAPTSAPPVAGPPRGRGRP
                      P P   L   T  +  R RGRPPK K P     QP    K T   S  P  R       PP+ P     P   PP  G PR  G  
Subjt:  --------------PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQP---KKKTTSGSGRPRGR-------PPKYP--KPAPTSAPPVAGPPRGRGRP

Query:  PKVKPAVAPVG
        P VKPA +  G
Subjt:  PKVKPAVAPVG

AT3G18035.1 winged-helix DNA-binding transcription factor family protein2.0e-1034.98Show/hide
Query:  PQPP----PPAPSLPH--YPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPP--------KRG
        PQP      P  S+PH  Y EMI AAI +LN+ +G SK AI++ IE  Y  L  A   LLTHHL  +K +G L  +K +Y     + PP           
Subjt:  PQPP----PPAPSLPH--YPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPP--------KRG

Query:  RGRP-PKPKV-------PLPPGTVVSP-PRPRGRPPKPKDPF--APISQ-PKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPK---VKPAV
        +G   P+ ++       P+  G+   P  R RGRPPKPK      P+ Q P       +G+P     +   P P   P      RG GRP K     PA 
Subjt:  RGRP-PKPKV-------PLPPGTVVSP-PRPRGRPPKPKDPF--APISQ-PKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPK---VKPAV

Query:  APV
        AP+
Subjt:  APV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCGACGACCAACTCAACAACCCGCCTCAACCACCTCCCCCTGCTCCCTCTCTCCCTCACTACCCCGAGATGATTATGGCAGCAATCGATTCTCTAAACGACAA
AAACGGAGTAAGCAAATCGGCGATTACTAAGCAAATCGAGTCCACATACGGCGATCTACCCCCTGCTTTCACTACGCTTCTCACTCATCACTTAGACGTCATGAAGCAAA
CCGGGCAACTCCTCTTCATCAAAAACAACTACATGAAGCCCGATCCCAACGCCCCACCTAAGCGTGGCAGAGGTCGTCCACCCAAGCCCAAAGTCCCTCTTCCACCAGGC
ACCGTCGTTTCTCCCCCACGCCCACGTGGCCGACCTCCTAAACCCAAAGATCCATTCGCTCCCATTTCACAACCCAAGAAGAAAACAACCTCGGGAAGTGGAAGGCCACG
TGGCCGCCCTCCGAAGTACCCCAAACCGGCACCCACCTCTGCTCCACCCGTCGCTGGTCCTCCCAGAGGCAGAGGACGGCCACCGAAGGTAAAGCCGGCCGTCGCCCCTG
TTGGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
AAAGAAAAGAAGAAGAAAATAAGAAAGAAGGGAGGGCGTGGAAAGTAGGTCCCACTATCCACGTCAACGATCCGTGTTGCCAAACACAATACTCAAATTCCAGCCCTGGG
ATCCTCACCCTTAGCTCTCTATCCCCAACCGTTGGATCTCCCCTGCCCTTCCTCCCGATCCCTTCCTCTCCCTATTTCCCCTTTTTAAATCCTTCCCTTTCCCCTTCTTC
AATCGTCTTCTTCCCACCAAACCTACAGTGCTTCTCTCTCGCTCTCTATCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTTTCTCTCTCTCTC
TAAAATCACATCATCTACGCCATCTCCTCTGCCACCATGGCTACCGACGACCAACTCAACAACCCGCCTCAACCACCTCCCCCTGCTCCCTCTCTCCCTCACTACCCCGA
GATGATTATGGCAGCAATCGATTCTCTAAACGACAAAAACGGAGTAAGCAAATCGGCGATTACTAAGCAAATCGAGTCCACATACGGCGATCTACCCCCTGCTTTCACTA
CGCTTCTCACTCATCACTTAGACGTCATGAAGCAAACCGGGCAACTCCTCTTCATCAAAAACAACTACATGAAGCCCGATCCCAACGCCCCACCTAAGCGTGGCAGAGGT
CGTCCACCCAAGCCCAAAGTCCCTCTTCCACCAGGCACCGTCGTTTCTCCCCCACGCCCACGTGGCCGACCTCCTAAACCCAAAGATCCATTCGCTCCCATTTCACAACC
CAAGAAGAAAACAACCTCGGGAAGTGGAAGGCCACGTGGCCGCCCTCCGAAGTACCCCAAACCGGCACCCACCTCTGCTCCACCCGTCGCTGGTCCTCCCAGAGGCAGAG
GACGGCCACCGAAGGTAAAGCCGGCCGTCGCCCCTGTTGGTTGTTGAATGGAACAAAACTAAAAACAGAGGATGAGAGAGAGAGAGAGAGAAATAGAAATTAGAGAGAAA
GAAGATGATAATTGTTTAGGTTGTGTTTAGCTGCTGAGAGCTCTCCGGGAATTGCTCTGTTTTTCATTTTTTTTCTTCCTTCTTTCTTCTAATTTTAAAAATTTTTAATC
TTACTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTAATTAATGTGTATTACGTGGCGGGTTATGTAGGGCTGTAATTCTGGGTGGGGGTTAGGAGATTGTAATTGCA
TGTAATTTATTTTACCGGTTGTTAGGGTTTTTTTTTTTCTTCCCTTCCCTTATTAAACTCTCCATTAAAAAAAATATATTTAAGTTTTAATTTATGCGGCCACTTTAAGG
G
Protein sequenceShow/hide protein sequence
MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRPPKPKVPLPPG
TVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPAVAPVGC