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CSPI05G19540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G19540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 17-like
Genome locationChr5:20815875..20816205
RNA-Seq ExpressionCSPI05G19540
SyntenyCSPI05G19540
Gene Ontology termsGO:0048731 - system development (biological process)
InterPro domainsIPR033249 - CLAVATA3/ESR (CLE)-related protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601877.1 CLAVATA3/ESR (CLE)-related protein 16, partial [Cucurbita argyrosperma subsp. sororia]7.7e-1961.05Show/hide
Query:  TSSRHRVRPTT--ALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN
        T + H    TT  A  LFFWVLLI  P TLCLHLPPPPP SRKL  FST S  HA    T+ P  L  R  SAA AA Y ++KRLIHTGPNPLHN
Subjt:  TSSRHRVRPTT--ALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN

KAG7016766.1 hypothetical protein SDJN02_21876, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-2166.35Show/hide
Query:  MTPSTGTSSRH--RVRPTTALFLFFWVLLILAP--TTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAA-VAAAYGENKRLIHTGPN
        M   T T SRH      TTAL LF WVLLILAP  TTLC  LPP P   RKL RFST SF HAPP   TSPAEL  R QS+A  AAAYG+ KRLIHTGPN
Subjt:  MTPSTGTSSRH--RVRPTTALFLFFWVLLILAP--TTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAA-VAAAYGENKRLIHTGPN

Query:  PLHN
        PLHN
Subjt:  PLHN

KAG7032578.1 hypothetical protein SDJN02_06627, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1859.79Show/hide
Query:  TSSRHRVRPTT--ALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRH--QSAAVAAAYGENKRLIHTGPNPLHN
        T + H    TT  A  LFFWVLLI  P TLCLHLPPPPP SRKL  FST S  HA     TSP EL       +AA AA Y ++KRLIHTGPNPLHN
Subjt:  TSSRHRVRPTT--ALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRH--QSAAVAAAYGENKRLIHTGPNPLHN

XP_008437694.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 17-like [Cucumis melo]1.1e-3885.86Show/hide
Query:  MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN
        MTP TGTSSRHR RPTTAL LFFWVLLILAPTTLCLHLPPPPPPSRKLARFST SF HAPPTTTTSPAEL DR Q    A+AY E+KRLIHTGPNPLHN
Subjt:  MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN

XP_011656246.1 CLAVATA3/ESR (CLE)-related protein 17 [Cucumis sativus]6.7e-4796.97Show/hide
Query:  MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN
        MTPSTGTSSRHRVRPTTALFLFFWVLLI APTTLCLHLPPPPPPSRKLARFST  FHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN
Subjt:  MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KSY2 Uncharacterized protein3.2e-4796.97Show/hide
Query:  MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN
        MTPSTGTSSRHRVRPTTALFLFFWVLLI APTTLCLHLPPPPPPSRKLARFST  FHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN
Subjt:  MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN

A0A178WDE5 CLE175.8e-0437.14Show/hide
Query:  GTSSRHRVRPTTALFLFFWVLLILAPTTLC---------LHL--PPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGP
        G   R  V  T   FLFF+V  +     L          LHL   PPPPP RK  R+ST  F          P    D          YG++KR++HTGP
Subjt:  GTSSRHRVRPTTALFLFFWVLLILAPTTLC---------LHL--PPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

A0A1S3AUM2 CLAVATA3/ESR (CLE)-related protein 17-like5.5e-3985.86Show/hide
Query:  MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN
        MTP TGTSSRHR RPTTAL LFFWVLLILAPTTLCLHLPPPPPPSRKLARFST SF HAPPTTTTSPAEL DR Q    A+AY E+KRLIHTGPNPLHN
Subjt:  MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN

A0A5A7TY55 CLAVATA3/ESR (CLE)-related protein 17-like5.5e-3985.86Show/hide
Query:  MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN
        MTP TGTSSRHR RPTTAL LFFWVLLILAPTTLCLHLPPPPPPSRKLARFST SF HAPPTTTTSPAEL DR Q    A+AY E+KRLIHTGPNPLHN
Subjt:  MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN

SwissProt top hitse value%identityAlignment
Q8L9H6 CLAVATA3/ESR (CLE)-related protein 171.6e-0637.14Show/hide
Query:  GTSSRHRVRPTTALFLFFWVLLILAPTTLC---------LHL--PPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGP
        G   R  V  T   FLFF+V  +     L          LHL   PPPPP RK  R+ST  F          P    D          YG++KR++HTGP
Subjt:  GTSSRHRVRPTTALFLFFWVLLILAPTTLC---------LHL--PPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 171.1e-0737.14Show/hide
Query:  GTSSRHRVRPTTALFLFFWVLLILAPTTLC---------LHL--PPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGP
        G   R  V  T   FLFF+V  +     L          LHL   PPPPP RK  R+ST  F          P    D          YG++KR++HTGP
Subjt:  GTSSRHRVRPTTALFLFFWVLLILAPTTLC---------LHL--PPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

AT1G70895.2 CLAVATA3/ESR-RELATED 171.1e-0737.14Show/hide
Query:  GTSSRHRVRPTTALFLFFWVLLILAPTTLC---------LHL--PPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGP
        G   R  V  T   FLFF+V  +     L          LHL   PPPPP RK  R+ST  F          P    D          YG++KR++HTGP
Subjt:  GTSSRHRVRPTTALFLFFWVLLILAPTTLC---------LHL--PPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCATCAACCGGAACCTCCAGTCGCCACCGCGTCAGACCCACCACCGCCCTTTTCCTCTTCTTCTGGGTCCTTCTCATTTTAGCTCCGACTACCCTCTGTCTTCA
CCTTCCCCCGCCGCCCCCGCCATCAAGGAAACTAGCCCGGTTCTCCACGCCGTCCTTTCACCATGCACCACCTACAACTACAACTTCCCCAGCTGAGCTTTTCGACCGCC
ATCAGTCCGCCGCCGTTGCTGCCGCGTACGGCGAAAACAAGCGGTTAATTCATACGGGTCCGAATCCTCTTCACAACTAA
mRNA sequenceShow/hide mRNA sequence
TAAAAACCCGCCTCCGTTTCACGGCGGCGGAATGACACCATCAACCGGAACCTCCAGTCGCCACCGCGTCAGACCCACCACCGCCCTTTTCCTCTTCTTCTGGGTCCTTC
TCATTTTAGCTCCGACTACCCTCTGTCTTCACCTTCCCCCGCCGCCCCCGCCATCAAGGAAACTAGCCCGGTTCTCCACGCCGTCCTTTCACCATGCACCACCTACAACT
ACAACTTCCCCAGCTGAGCTTTTCGACCGCCATCAGTCCGCCGCCGTTGCTGCCGCGTACGGCGAAAACAAGCGGTTAATTCATACGGGTCCGAATCCTCTTCACAACTA
A
Protein sequenceShow/hide protein sequence
MTPSTGTSSRHRVRPTTALFLFFWVLLILAPTTLCLHLPPPPPPSRKLARFSTPSFHHAPPTTTTSPAELFDRHQSAAVAAAYGENKRLIHTGPNPLHN