CuGenDBv2

Gene ID	CSPI05G19590
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	H15 domain-containing protein
Genome location	Chr5:20851380..20852061
RNA-Seq Expression	CSPI05G19590
Synteny	CSPI05G19590
Gene Ontology terms	GO:0006334 - nucleosome assembly (biological process) GO:0006413 - translational initiation (biological process) GO:0000786 - nucleosome (cellular component) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function) GO:0008168 - methyltransferase activity (molecular function)
InterPro domains	IPR005818 - Linker histone H1/H5, domain H15 IPR036388 - Winged helix-like DNA-binding domain superfamily IPR036390 - Winged helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0046320.1 transcription regulatory protein SNF2-like isoform X3 [Cucumis melo var. makuwa]

4.5e-75

88.24

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Query:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA
        MEIS SQ SSIRPPP+N SS SSNAPHSD RHSLIAGR RDALFSAVA KYST NGTAHSLPF SDQFKSVIDCR+ ENFPSF+TPTH PYASMI RAIA
Subjt:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA

Query:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK
        EVG EDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYN K+EDKG+KRKK RRK
Subjt:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

KAE8648608.1 hypothetical protein Csa_009414 [Cucumis sativus]

1.9e-78

88.82

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Query:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA
        MEISQSQ SSI PPPDN +SSSS  PHSD RHSLIAGRFRDALFSAVA KYS NNGTAHSLPF SDQFKSVIDCRIHENFPSFRTPTH PYASMILRAIA
Subjt:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA

Query:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK
        EVG EDGLSEESIS FI+NEY+DLPWAHSAYLRRHLGKLCENGE+VKLKCGRYN K+EDKG+KRKKGRRK
Subjt:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

XP_011655461.2 uncharacterized protein LOC105435537 isoform X1 [Cucumis sativus]

1.9e-78

88.82

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Query:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA
        MEISQSQ SSI PPPDN +SSSS  PHSD RHSLIAGRFRDALFSAVA KYS NNGTAHSLPF SDQFKSVIDCRIHENFPSFRTPTH PYASMILRAIA
Subjt:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA

Query:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK
        EVG EDGLSEESIS FI+NEY+DLPWAHSAYLRRHLGKLCENGE+VKLKCGRYN K+EDKG+KRKKGRRK
Subjt:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

XP_022993719.1 uncharacterized protein LOC111489634 isoform X1 [Cucurbita maxima]

9.7e-62

74.71

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Query:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA
        ME SQ   S+I  PP+N    SS  PHSD R+SLIAGRFRDALFSA A KY+T NG+AHSLPF S+QFKSVI+C +HENFPSFRTPTH PYASMI +AIA
Subjt:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA

Query:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK
        EVG EDGLSEE ISEFIVNEY+DLPWAH A+LRRHLGKLCE+GELVK KCG+YN K+E K +KRKK RRK
Subjt:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

XP_038907055.1 uncharacterized protein LOC120092885 [Benincasa hispida]

7.6e-67

79.41

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Query:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA
        ME SQ QHSSI PPP   S  SS  P SD RHSL+AGRFRDALFSAVA KYST NG+AHS PFHS+QFKSV+DCRIHENFPSF+TPTH PYASMI RAIA
Subjt:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA

Query:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK
        E G EDGLSEESISEFIVNEYEDLPWAH A+LRRHLGKLCE+GELVK  CGRYN K+E  G+KRKK RRK
Subjt:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPL0 H15 domain-containing protein

9.4e-79

88.82

Show/hide

Query:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA
        MEISQSQ SSI PPPDN +SSSS  PHSD RHSLIAGRFRDALFSAVA KYS NNGTAHSLPF SDQFKSVIDCRIHENFPSFRTPTH PYASMILRAIA
Subjt:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA

Query:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK
        EVG EDGLSEESIS FI+NEY+DLPWAHSAYLRRHLGKLCENGE+VKLKCGRYN K+EDKG+KRKKGRRK
Subjt:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

A0A5D3E3L6 Transcription regulatory protein SNF2-like isoform X3

2.2e-75

88.24

Show/hide

Query:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA
        MEIS SQ SSIRPPP+N SS SSNAPHSD RHSLIAGR RDALFSAVA KYST NGTAHSLPF SDQFKSVIDCR+ ENFPSF+TPTH PYASMI RAIA
Subjt:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA

Query:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK
        EVG EDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYN K+EDKG+KRKK RRK
Subjt:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

A0A6J1DFJ3 uncharacterized protein LOC111020032

5.9e-49

66.24

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Query:  PPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESI
        P    +S  S    SD RHSL++ + RD LFSA+  KY+T +G+  SLPF S++ KS ++ R+HE  PSF TPTH PYASMI RAIAEVG EDGLSEESI
Subjt:  PPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESI

Query:  SEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK
        S+FIVNEYEDLPWAH+A LRRHLGKLCE+GELVK KCGRYN ++EDKG+KRK+ RRK
Subjt:  SEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

A0A6J1FEI4 uncharacterized protein LOC111444998 isoform X1

2.3e-61

73.53

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Query:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA
        ME SQ   S+I  PP+N    SS  PHSD R+SLIAGRFRDALFSA A KY+T NG+AHSLPF S+QFKSVI+C +H+NFPSFRTPTH PYASMI +AIA
Subjt:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA

Query:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK
        E+G EDGLSEE ISEFIVNEY+DLPWAH A+LRRHLGKLCE+GELVK KCG+YN K+E K +KRKK RRK
Subjt:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

A0A6J1K0W5 uncharacterized protein LOC111489634 isoform X1

4.7e-62

74.71

Show/hide

Query:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA
        ME SQ   S+I  PP+N    SS  PHSD R+SLIAGRFRDALFSA A KY+T NG+AHSLPF S+QFKSVI+C +HENFPSFRTPTH PYASMI +AIA
Subjt:  MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIA

Query:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK
        EVG EDGLSEE ISEFIVNEY+DLPWAH A+LRRHLGKLCE+GELVK KCG+YN K+E K +KRKK RRK
Subjt:  EVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

SwissProt top hits

e value

%identity

Alignment

Q9FYS5 HMG-Y-related protein A

2.4e-07

39.24

Show/hide

Query:  PYASMILRAIAEVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGR
        PY  MIL AI  +  + G ++ +IS++I  +Y  LP AH++ L  HL ++ E+GELV LK   +     D   KR +GR
Subjt:  PYASMILRAIAEVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGR

Arabidopsis top hits

e value

%identity

Alignment

AT5G08780.1 winged-helix DNA-binding transcription factor family protein

1.1e-10

41.57

Show/hide

Query:  RTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGR--YNLKMEDKGIKRKKGRRK
        RTP H  Y++MI  AI ++  E G SE++ISEFI ++Y++LP+AH+  L  HL KL E  E++   C    Y+L  E K +     +RK
Subjt:  RTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGR--YNLKMEDKGIKRKKGRRK

Sequences

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CDS sequence

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ATGGAGATTTCTCAATCCCAACACTCTTCCATTCGTCCGCCGCCCGATAATCCCTCGTCTTCCTCTTCTAACGCACCGCATTCTGATCTCCGTCATTCACTCATAGCGGG
GAGGTTCAGAGATGCCCTCTTCTCCGCCGTCGCTCTCAAATATTCAACCAATAATGGCACCGCCCACTCTTTGCCCTTCCACTCCGATCAGTTCAAGTCTGTTATCGACT
GCCGCATTCATGAGAACTTTCCCTCCTTTCGAACTCCTACACATCGTCCTTATGCCTCGATGATACTGAGAGCAATAGCTGAAGTTGGAGGGGAAGATGGGTTGAGTGAG
GAGTCAATATCAGAGTTTATCGTGAATGAGTATGAGGACTTGCCATGGGCACACTCAGCGTATTTGCGTCGCCATTTGGGGAAGCTCTGTGAAAATGGGGAGCTAGTGAA
ATTAAAATGTGGGAGGTATAACTTGAAGATGGAGGATAAGGGAATAAAGAGGAAGAAAGGGAGGAGAAAATAA

mRNA sequence

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Protein sequence

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MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSE
ESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK

CSPI05G19590 (gene) of Cucumber (PI 183967) v1 genome