; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G19770 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G19770
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionextensin-like
Genome locationChr5:20952699..20953724
RNA-Seq ExpressionCSPI05G19770
SyntenyCSPI05G19770
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032543.1 hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-3871.83Show/hide
Query:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
        MLP   LLFL  LLLISPSS  +S  VRRLDD  TP DP VKC+PCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P+FM
Subjt:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM

Query:  YITGPPGDLYPIDQGYNAAGRR----SAATVVGVVLAGLLLV
        YITGPPGDLYPIDQ YNAA RR    +A+ VVG+ +AG+L++
Subjt:  YITGPPGDLYPIDQGYNAAGRR----SAATVVGVVLAGLLLV

XP_004150475.1 leucine-rich repeat extensin-like protein 6 [Cucumis sativus]1.9e-63100Show/hide
Query:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
        MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
Subjt:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM

Query:  YITGPPGDLYPIDQGYNAAGRRSAATVVGVVLAGLLLVV
        YITGPPGDLYPIDQGYNAAGRRSAATVVGVVLAGLLLVV
Subjt:  YITGPPGDLYPIDQGYNAAGRRSAATVVGVVLAGLLLVV

XP_008467156.1 PREDICTED: extensin-like [Cucumis melo]8.2e-5994.96Show/hide
Query:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
        MLPLKFLLFLNFLLLISPSSALTS TVRRLDDTTTPTDPNVKCAPCEQNPPSPPPP+VYPSPPPPSPPPPDVVPYYSPPPPKKKEPK+PNCPPPPSPSFM
Subjt:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM

Query:  YITGPPGDLYPIDQGYNAAGRRS-AATVVGVVLAGLLLV
        YITGPPGDLYPIDQ YNAAGRRS AA  VGVVLAGLLLV
Subjt:  YITGPPGDLYPIDQGYNAAGRRS-AATVVGVVLAGLLLV

XP_022953268.1 extensin [Cucurbita moschata]1.6e-3871.83Show/hide
Query:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
        MLP   LLFL  LLLISPSS  +S  VRRLDD  TP DP VKC+PCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P+FM
Subjt:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM

Query:  YITGPPGDLYPIDQGYNAAGRR----SAATVVGVVLAGLLLV
        YITGPPGDLYPIDQ YNAA RR    +A+ VVG+ +AG+L++
Subjt:  YITGPPGDLYPIDQGYNAAGRR----SAATVVGVVLAGLLLV

XP_022989990.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]2.7e-3871.03Show/hide
Query:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLP   LLFL  LLLISPSS  +S  VRRLDDT    TP DP VKC+PCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPPSP
Subjt:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDQGYNAAGRR----SAATVVGVVLAGLLLV
        +FMYITGPPGDLYPIDQ YNAA RR    +A+ V+G+ +AG+L++
Subjt:  SFMYITGPPGDLYPIDQGYNAAGRR----SAATVVGVVLAGLLLV

TrEMBL top hitse value%identityAlignment
A0A0A0KPJ1 Uncharacterized protein9.1e-64100Show/hide
Query:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
        MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
Subjt:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM

Query:  YITGPPGDLYPIDQGYNAAGRRSAATVVGVVLAGLLLVV
        YITGPPGDLYPIDQGYNAAGRRSAATVVGVVLAGLLLVV
Subjt:  YITGPPGDLYPIDQGYNAAGRRSAATVVGVVLAGLLLVV

A0A1S3CT22 extensin-like4.0e-5994.96Show/hide
Query:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
        MLPLKFLLFLNFLLLISPSSALTS TVRRLDDTTTPTDPNVKCAPCEQNPPSPPPP+VYPSPPPPSPPPPDVVPYYSPPPPKKKEPK+PNCPPPPSPSFM
Subjt:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM

Query:  YITGPPGDLYPIDQGYNAAGRRS-AATVVGVVLAGLLLV
        YITGPPGDLYPIDQ YNAAGRRS AA  VGVVLAGLLLV
Subjt:  YITGPPGDLYPIDQGYNAAGRRS-AATVVGVVLAGLLLV

A0A6J1FGG4 formin-like protein 33.6e-3673.19Show/hide
Query:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
        MLPL FLL L  LLLISPSS  T+   RRLDD+       VKC PCEQNPPS PPP +YPSPPPPSPPPPD++PYYSPPPPKKK+ K+PNCPPPP  +FM
Subjt:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM

Query:  YITGPPGDLYPIDQGYNAAGRRSAATVVGVVLAGLLLV
        YITGPPGDLYPIDQ +NAAGRRS A VV ++LAGLLLV
Subjt:  YITGPPGDLYPIDQGYNAAGRRSAATVVGVVLAGLLLV

A0A6J1GMY1 extensin7.8e-3971.83Show/hide
Query:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
        MLP   LLFL  LLLISPSS  +S  VRRLDD  TP DP VKC+PCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P+FM
Subjt:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM

Query:  YITGPPGDLYPIDQGYNAAGRR----SAATVVGVVLAGLLLV
        YITGPPGDLYPIDQ YNAA RR    +A+ VVG+ +AG+L++
Subjt:  YITGPPGDLYPIDQGYNAAGRR----SAATVVGVVLAGLLLV

A0A6J1JNW0 leucine-rich repeat extensin-like protein 31.3e-3871.03Show/hide
Query:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLP   LLFL  LLLISPSS  +S  VRRLDDT    TP DP VKC+PCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPPSP
Subjt:  MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDQGYNAAGRR----SAATVVGVVLAGLLLV
        +FMYITGPPGDLYPIDQ YNAA RR    +A+ V+G+ +AG+L++
Subjt:  SFMYITGPPGDLYPIDQGYNAAGRR----SAATVVGVVLAGLLLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein8.3e-0942.98Show/hide
Query:  LTSVTVRRLDDTTTPTDPNVKCAPCEQN----PPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYI-TGPPGDLYPIDQGY
        L S  +   +D++   D  V C PC QN    PPSPPPP   PSPPPPSP          PPP K   P SP  PPPP P   Y+ T PPGDLYPI+  Y
Subjt:  LTSVTVRRLDDTTTPTDPNVKCAPCEQN----PPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYI-TGPPGDLYPIDQGY

Query:  NAAGRRSAATVVGVVLAGLLL
         AA    + +V+ + + G+++
Subjt:  NAAGRRSAATVVGVVLAGLLL

AT1G23040.1 hydroxyproline-rich glycoprotein family protein9.4e-1347.62Show/hide
Query:  LLISPSSALTSVTVRRLDDTTTPTDPNVKCAP-CEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPI
        L+   SS+  S+  R+LD+     DP +KC+P C QNPP P PP   PSPPPP+ PPP  +P   PPPPKK    S  CPPPP  +F+YITGPPG+LYP+
Subjt:  LLISPSSALTSVTVRRLDDTTTPTDPNVKCAP-CEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPI

Query:  DQGYNAAGRRSAATV--VGVVLAGLL
        D+ + AA  +S   V   G++  G++
Subjt:  DQGYNAAGRRSAATV--VGVVLAGLL

AT1G70990.1 proline-rich family protein9.8e-1044.29Show/hide
Query:  LKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQN--PPSPPPPVVYPSPPPPS---PPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPS
        L  ++FL F ++I+ S + T+   R+L++     DP +KC PC QN  PPSPPP    PSPPPPS   PPPP       PP P    PK   CPPPPS +
Subjt:  LKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQN--PPSPPPPVVYPSPPPPS---PPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPS

Query:  FMYITGPPGDLYPIDQGYNAAGRRS--AATVVGVVLAGLL
        ++Y+TGPPG+LYPIDQ + AA  +S     + G++  G++
Subjt:  FMYITGPPGDLYPIDQGYNAAGRRS--AATVVGVVLAGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTCTCAAATTTCTCCTTTTTCTCAATTTCCTCCTCCTCATTTCCCCTTCCTCGGCCCTCACCTCCGTCACCGTCCGCCGCCTCGATGACACCACCACCCCCAC
CGACCCCAACGTCAAGTGCGCCCCATGCGAACAAAATCCCCCGTCTCCGCCGCCGCCGGTTGTGTACCCCTCACCACCGCCGCCGTCTCCTCCGCCACCCGATGTCGTCC
CCTACTACTCTCCCCCACCCCCCAAGAAGAAAGAGCCCAAAAGCCCCAACTGCCCTCCGCCGCCGTCTCCGTCGTTCATGTACATAACTGGACCTCCCGGCGACCTCTAT
CCCATCGACCAGGGTTACAACGCCGCCGGGCGGAGATCCGCCGCAACCGTGGTTGGGGTTGTTCTGGCCGGGCTTCTGTTGGTCGTTTAG
mRNA sequenceShow/hide mRNA sequence
CTTATATGAAAACAGAAATATAAAATGTCTATTGTTTCATTGTTTCATTCTGTGTAAAAGTGATGAATGAAATAGATAGATTCGATACTATTAAATAAAAAAACTAAAAT
TGGAGAATTCATGAGAATAAAGATGACATTAAAAAAAAAAAGAAAAAACTATTCCCTTAGCTGGGAATCCAAACACTCCTTTTTCTCTCTCTCTCTTAAGTCTTCAAAGT
TTTATACAGTTTCCATGCACCCATTCATCTAACTAATTTCCCACTCTTTCTTCTCTCTAGAAAAATGCTTCCTCTCAAATTTCTCCTTTTTCTCAATTTCCTCCTCCTCA
TTTCCCCTTCCTCGGCCCTCACCTCCGTCACCGTCCGCCGCCTCGATGACACCACCACCCCCACCGACCCCAACGTCAAGTGCGCCCCATGCGAACAAAATCCCCCGTCT
CCGCCGCCGCCGGTTGTGTACCCCTCACCACCGCCGCCGTCTCCTCCGCCACCCGATGTCGTCCCCTACTACTCTCCCCCACCCCCCAAGAAGAAAGAGCCCAAAAGCCC
CAACTGCCCTCCGCCGCCGTCTCCGTCGTTCATGTACATAACTGGACCTCCCGGCGACCTCTATCCCATCGACCAGGGTTACAACGCCGCCGGGCGGAGATCCGCCGCAA
CCGTGGTTGGGGTTGTTCTGGCCGGGCTTCTGTTGGTCGTTTAGAAACGGTGGGATCTCAATAGAATTTCTCGTAAGGTAAAACAAATTTCCCCGTACGAGAAACTTTTT
AATTTGGGATATTATTGTTTTAGAATTTTTATGGTTCATCATCATAATTTTCTTGTCCAATAATTTTGTAATTTGTACCAAATATTTAATTTGTCCAGAAATTTGTGATA
AGAAAAAGAAGAGAAGATATCTGTGTTTTTGTTTAGCAATTTATTTTCCTCTCCTTTTTCAATGAAAATATGGAAAATTAGGCCAAAATTATTCAGTGCGATCATTTTCT
CTTTTTCAATATGAATGCAAATTTGGATGATTCGAA
Protein sequenceShow/hide protein sequence
MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLY
PIDQGYNAAGRRSAATVVGVVLAGLLLVV