; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G20170 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G20170
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription factor CYCLOIDEA
Genome locationChr5:21349552..21350454
RNA-Seq ExpressionCSPI05G20170
SyntenyCSPI05G20170
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:2000032 - regulation of secondary shoot formation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51554.1 hypothetical protein Csa_008919 [Cucumis sativus]1.1e-158100Show/hide
Query:  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ
        MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ
Subjt:  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ

Query:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDK
        GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDK
Subjt:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDK

Query:  IKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
        IKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
Subjt:  IKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP

TYK00281.1 transcription factor CYCLOIDEA [Cucumis melo var. makuwa]3.8e-14693.11Show/hide
Query:  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ
        MDDHQQQQH+E+QILINSYDDHD HYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSR NGSNSTKRRGKKDRHSKIYTAQ
Subjt:  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ

Query:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKD
        GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGV NVAASN L Q+QDQEDVAFTGGFKD
Subjt:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKD

Query:  KIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISS----SSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDST
        KIKSRTLRT +REARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISS    ++NNNNNTYLDYYPTFSCPS+S+FLPSPL LPYSF+DST
Subjt:  KIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISS----SSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDST

Query:  LLKLP
        +LKLP
Subjt:  LLKLP

XP_011656248.2 transcription factor TCP12 [Cucumis sativus]1.1e-158100Show/hide
Query:  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ
        MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ
Subjt:  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ

Query:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDK
        GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDK
Subjt:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDK

Query:  IKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
        IKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
Subjt:  IKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP

XP_016903718.1 PREDICTED: transcription factor CYCLOIDEA [Cucumis melo]2.1e-6495.83Show/hide
Query:  MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKDKIKSRT
        MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGV NVAASN L Q+QDQEDVAFTGGFKDKIKSRT
Subjt:  MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKDKIKSRT

Query:  LRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLS
        LRT +REARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLS
Subjt:  LRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLS

XP_022974210.1 transcription factor CYCLOIDEA-like [Cucurbita maxima]1.0e-4254.12Show/hide
Query:  DHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFF------EQRDQQLDETTKK---------MKKKKKLCGSSSSRKNGSNSTKRR
        +H   QHQE       ++++ + +FPHPFLD DDLFL+H LS QQ F       EQ  +   + TK+         +KKKKK C  S +RKNGS S K+ 
Subjt:  DHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFF------EQRDQQLDETTKK---------MKKKKKLCGSSSSRKNGSNSTKRR

Query:  GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQ--------SSEVVSE-INDNNGVFNVA
        GKKDRHSKIYTAQGPRDRR+RLSLQIARKFFDLQDMLGFDKAS TIEWLL NS SAIKDL+ +     +NSG         S+E VSE I DNNG    A
Subjt:  GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQ--------SSEVVSE-INDNNGVFNVA

Query:  ASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLP
                  ++ AF    K K +SR LR V RE+RDRARARARQRT+LK T  P
Subjt:  ASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLP

TrEMBL top hitse value%identityAlignment
A0A0A0KRR2 TCP domain-containing protein5.5e-159100Show/hide
Query:  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ
        MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ
Subjt:  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ

Query:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDK
        GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDK
Subjt:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDK

Query:  IKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
        IKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
Subjt:  IKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP

A0A1S4E661 transcription factor CYCLOIDEA1.0e-6495.83Show/hide
Query:  MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKDKIKSRT
        MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGV NVAASN L Q+QDQEDVAFTGGFKDKIKSRT
Subjt:  MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKDKIKSRT

Query:  LRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLS
        LRT +REARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLS
Subjt:  LRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLS

A0A5D3BKD8 Transcription factor CYCLOIDEA1.8e-14693.11Show/hide
Query:  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ
        MDDHQQQQH+E+QILINSYDDHD HYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSR NGSNSTKRRGKKDRHSKIYTAQ
Subjt:  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQ

Query:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKD
        GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGV NVAASN L Q+QDQEDVAFTGGFKD
Subjt:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKD

Query:  KIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISS----SSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDST
        KIKSRTLRT +REARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISS    ++NNNNNTYLDYYPTFSCPS+S+FLPSPL LPYSF+DST
Subjt:  KIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISS----SSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDST

Query:  LLKLP
        +LKLP
Subjt:  LLKLP

A0A6J1EPH0 transcription factor TCP12-like1.6e-4154.12Show/hide
Query:  DHQQQQHQEDQILINSYDDHDFH-YFPHPFLDDDDLFLSHFLSQQQQFF------EQRDQQLDETTK--------KMKKKKKLCGSSSSRKNGSNSTKRR
        +H   QHQE         + + H +FPHPFLD DDLFL+H LS Q  F       EQ  +Q  + TK        ++ KKKK C  S +RKNGS S K+ 
Subjt:  DHQQQQHQEDQILINSYDDHDFH-YFPHPFLDDDDLFLSHFLSQQQQFF------EQRDQQLDETTK--------KMKKKKKLCGSSSSRKNGSNSTKRR

Query:  GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQ--------SSEVVSE-INDNNGVFNVA
        GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS TIEWLL NS SAIKDL+ +     +NSG         S+E VSE I DNNG    A
Subjt:  GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQ--------SSEVVSE-INDNNGVFNVA

Query:  ASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLP
                  ++ AF    K K +SR LR V RE+RDRARARARQRT+LK    P
Subjt:  ASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLP

A0A6J1IDD5 transcription factor CYCLOIDEA-like5.0e-4354.12Show/hide
Query:  DHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFF------EQRDQQLDETTKK---------MKKKKKLCGSSSSRKNGSNSTKRR
        +H   QHQE       ++++ + +FPHPFLD DDLFL+H LS QQ F       EQ  +   + TK+         +KKKKK C  S +RKNGS S K+ 
Subjt:  DHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFF------EQRDQQLDETTKK---------MKKKKKLCGSSSSRKNGSNSTKRR

Query:  GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQ--------SSEVVSE-INDNNGVFNVA
        GKKDRHSKIYTAQGPRDRR+RLSLQIARKFFDLQDMLGFDKAS TIEWLL NS SAIKDL+ +     +NSG         S+E VSE I DNNG    A
Subjt:  GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQ--------SSEVVSE-INDNNGVFNVA

Query:  ASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLP
                  ++ AF    K K +SR LR V RE+RDRARARARQRT+LK T  P
Subjt:  ASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLP

SwissProt top hitse value%identityAlignment
A0AQW4 Transcription factor TCP122.3e-2140.45Show/hide
Query:  NSYDDHDFHYFP--HPFLD--DDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKK----LCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMR
        NS+  +    FP    FL+  D+   ++ FL QQQ       +   +  KK++ KKK    + GS+S       + K   K+DRHSKI TAQGPRDRRMR
Subjt:  NSYDDHDFHYFP--HPFLD--DDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKK----LCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMR

Query:  LSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRT
        LSLQIARKFFDLQDMLGFDKASKTIEWL   S ++IK LK+      S  G   E +                   E+++++       K + K+     
Subjt:  LSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRT

Query:  VAREARDRARARARQRTLLK
          +E+R+RAR RAR+RT+ K
Subjt:  VAREARDRARARARQRTLLK

O49250 Transcription factor CYCLOIDEA2.5e-2348.59Show/hide
Query:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLY
        TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S +AIK+L Q+   K ++S       S  +D   V +V + N+ 
Subjt:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLY

Query:  QEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRT
             + +      K+ + S   +  A+E+R +ARARAR+RT
Subjt:  QEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRT

Q9SBV6 Transcription factor CYCLOIDEA (Fragment)2.5e-2348.59Show/hide
Query:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLY
        TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S +AIK+L Q+   K ++S       S  +D   V +V + N+ 
Subjt:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLY

Query:  QEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRT
             + +      K+ + S   +  A+E+R +ARARAR+RT
Subjt:  QEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRT

Q9SBV9 Transcription factor CYCLOIDEA (Fragment)2.5e-2347.89Show/hide
Query:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLY
        TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S +A+K+L Q+   K ++S       S  +D   V +V + N+ 
Subjt:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLY

Query:  QEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRT
             + +      K+ + S   +  A+E+R +ARARAR+RT
Subjt:  QEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRT

Q9SNW8 Transcription factor DICHOTOMA2.6e-2048.59Show/hide
Query:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQ
        K   KKDRHSKI   QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S  AIK+L Q+   K + S   SE   E         V +++L  
Subjt:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQ

Query:  EQDQEDVAFTGGFKDKIK-SRTLRTVAREARDRARARARQRT
            +  A  G   +K K  R    +A+E+R +ARARAR+RT
Subjt:  EQDQEDVAFTGGFKDKIK-SRTLRTVAREARDRARARARQRT

Arabidopsis top hitse value%identityAlignment
AT1G53230.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 33.3e-1554.29Show/hide
Query:  GSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQ
        G +  +  G+KDRHSK+ TA+GPRDRR+RLS   A +F+D+QD LGFD+ SK ++WL+  + SAI DL Q
Subjt:  GSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQ

AT1G67260.1 TCP family transcription factor1.7e-1943.86Show/hide
Query:  SNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFK-----YSNSGQSSEVVSE-INDNNG-
        S   K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKASKT++WLL  S  AIK++ QA         + N G   E   E   D+NG 
Subjt:  SNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFK-----YSNSGQSSEVVSE-INDNNG-

Query:  -VFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQ
          F    S  Y E++    A   G + K KS      ++    +AR +A++RT  +     NP   S I+Q
Subjt:  -VFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQ

AT1G67260.2 TCP family transcription factor1.7e-1943.86Show/hide
Query:  SNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFK-----YSNSGQSSEVVSE-INDNNG-
        S   K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKASKT++WLL  S  AIK++ QA         + N G   E   E   D+NG 
Subjt:  SNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFK-----YSNSGQSSEVVSE-INDNNG-

Query:  -VFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQ
          F    S  Y E++    A   G + K KS      ++    +AR +A++RT  +     NP   S I+Q
Subjt:  -VFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQ

AT1G68800.1 TCP domain protein 121.7e-2240.45Show/hide
Query:  NSYDDHDFHYFP--HPFLD--DDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKK----LCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMR
        NS+  +    FP    FL+  D+   ++ FL QQQ       +   +  KK++ KKK    + GS+S       + K   K+DRHSKI TAQGPRDRRMR
Subjt:  NSYDDHDFHYFP--HPFLD--DDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKK----LCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMR

Query:  LSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRT
        LSLQIARKFFDLQDMLGFDKASKTIEWL   S ++IK LK+      S  G   E +                   E+++++       K + K+     
Subjt:  LSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRT

Query:  VAREARDRARARARQRTLLK
          +E+R+RAR RAR+RT+ K
Subjt:  VAREARDRARARARQRTLLK

AT3G18550.1 TCP family transcription factor2.8e-1457.75Show/hide
Query:  SSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAI
        S+S+       K+  + DRHSKI TA+G RDRRMRLSL +A++ F LQDMLGFDKASKT+EWLL  +   I
Subjt:  SSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCATCAACAACAACAACATCAAGAGGATCAAATCCTCATCAACTCATATGATGATCATGATTTTCATTATTTCCCACATCCTTTTCTTGATGACGACGACCT
ATTTTTAAGCCATTTTCTATCACAACAACAACAATTCTTCGAACAACGAGATCAGCAACTTGACGAAACGACGAAAAAGATGAAGAAGAAGAAGAAATTGTGTGGAAGTA
GTAGTAGTAGAAAAAATGGGAGCAACTCTACAAAGAGAAGAGGGAAGAAGGATAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCC
CTTCAAATTGCAAGGAAATTCTTTGATCTTCAAGACATGCTAGGCTTTGACAAAGCTAGTAAAACTATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCT
CAAACAAGCCTACTTCTTTAAGTACTCAAATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATGATAACAATGGTGTTTTTAATGTTGCTGCTTCTAATCTATATC
AAGAACAAGATCAAGAAGATGTTGCGTTTACGGGCGGTTTTAAAGACAAGATCAAAAGCAGGACGTTACGAACCGTTGCGAGAGAGGCGAGGGATAGGGCGAGAGCTAGG
GCAAGACAAAGAACACTCTTGAAAAATACTTTACTACCAAACCCTCCTATTACTTCTTCCATTTCTCAACATTTTGATCATCTCTCAGGTAATAACAATATTAGTAGTAG
TAGTAATAATAATAATAATACCTATCTTGATTATTATCCTACATTTTCTTGCCCTAGTACTTCCATTTTCCTTCCTTCTCCACTTCCCTTACCCTACTCTTTTACTGATT
CCACATTACTTAAATTGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCATCAACAACAACAACATCAAGAGGATCAAATCCTCATCAACTCATATGATGATCATGATTTTCATTATTTCCCACATCCTTTTCTTGATGACGACGACCT
ATTTTTAAGCCATTTTCTATCACAACAACAACAATTCTTCGAACAACGAGATCAGCAACTTGACGAAACGACGAAAAAGATGAAGAAGAAGAAGAAATTGTGTGGAAGTA
GTAGTAGTAGAAAAAATGGGAGCAACTCTACAAAGAGAAGAGGGAAGAAGGATAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCC
CTTCAAATTGCAAGGAAATTCTTTGATCTTCAAGACATGCTAGGCTTTGACAAAGCTAGTAAAACTATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCT
CAAACAAGCCTACTTCTTTAAGTACTCAAATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATGATAACAATGGTGTTTTTAATGTTGCTGCTTCTAATCTATATC
AAGAACAAGATCAAGAAGATGTTGCGTTTACGGGCGGTTTTAAAGACAAGATCAAAAGCAGGACGTTACGAACCGTTGCGAGAGAGGCGAGGGATAGGGCGAGAGCTAGG
GCAAGACAAAGAACACTCTTGAAAAATACTTTACTACCAAACCCTCCTATTACTTCTTCCATTTCTCAACATTTTGATCATCTCTCAGGTAATAACAATATTAGTAGTAG
TAGTAATAATAATAATAATACCTATCTTGATTATTATCCTACATTTTCTTGCCCTAGTACTTCCATTTTCCTTCCTTCTCCACTTCCCTTACCCTACTCTTTTACTGATT
CCACATTACTTAAATTGCCCTAA
Protein sequenceShow/hide protein sequence
MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLS
LQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARAR
ARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP