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CSPI05G20380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G20380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionG-patch domain-containing protein
Genome locationChr5:21493523..21497005
RNA-Seq ExpressionCSPI05G20380
SyntenyCSPI05G20380
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000467 - G-patch domain
IPR039146 - G patch domain and ankyrin repeat-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147099.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus]6.1e-61100Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
        MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK

Query:  MQEEERLFQEKEFEQAFFREFWPENV
        MQEEERLFQEKEFEQAFFREFWPENV
Subjt:  MQEEERLFQEKEFEQAFFREFWPENV

XP_008445906.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 [Cucumis melo]8.2e-5895.24Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
        MDLESGPGGSVSAAAIDSSNIGF+LLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKET DNA SDRKNNQERPPPKK KGL+KRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK

Query:  MQEEERLFQEKEFEQAFFREFWPENV
        MQEEERLFQEKEFE+AFFREFWPENV
Subjt:  MQEEERLFQEKEFEQAFFREFWPENV

XP_016900186.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Cucumis melo]8.2e-5895.24Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
        MDLESGPGGSVSAAAIDSSNIGF+LLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKET DNA SDRKNNQERPPPKK KGL+KRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK

Query:  MQEEERLFQEKEFEQAFFREFWPENV
        MQEEERLFQEKEFE+AFFREFWPENV
Subjt:  MQEEERLFQEKEFEQAFFREFWPENV

XP_022945156.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moschata]3.1e-4984.92Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
        MDLESG GGSVSA AIDSSNIGF+LLKKHGWREGTGLG+SEQGRLEPVQ SVKNNKRGLGADKVKKK+KETTD A SD K NQERPP KKAK ++K+MRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK

Query:  MQEEERLFQEKEFEQAFFREFWPENV
        M EEERLF+EKEFE+AFFREFWP+NV
Subjt:  MQEEERLFQEKEFEQAFFREFWPENV

XP_038891672.1 protein PXR1 [Benincasa hispida]2.2e-5088.1Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
        MDLE G GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGVSEQGRLEPVQAS+KNNKRGLGADKVKKK+KETTD A SDRKNNQ      KAKGL+KRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK

Query:  MQEEERLFQEKEFEQAFFREFWPENV
        MQEEERLFQEKEFE+AFFREFWPENV
Subjt:  MQEEERLFQEKEFEQAFFREFWPENV

TrEMBL top hitse value%identityAlignment
A0A0A0KPR8 G-patch domain-containing protein2.9e-61100Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
        MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK

Query:  MQEEERLFQEKEFEQAFFREFWPENV
        MQEEERLFQEKEFEQAFFREFWPENV
Subjt:  MQEEERLFQEKEFEQAFFREFWPENV

A0A1S3BEH2 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X24.0e-5895.24Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
        MDLESGPGGSVSAAAIDSSNIGF+LLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKET DNA SDRKNNQERPPPKK KGL+KRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK

Query:  MQEEERLFQEKEFEQAFFREFWPENV
        MQEEERLFQEKEFE+AFFREFWPENV
Subjt:  MQEEERLFQEKEFEQAFFREFWPENV

A0A1S4DW19 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X14.0e-5895.24Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
        MDLESGPGGSVSAAAIDSSNIGF+LLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKET DNA SDRKNNQERPPPKK KGL+KRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK

Query:  MQEEERLFQEKEFEQAFFREFWPENV
        MQEEERLFQEKEFE+AFFREFWPENV
Subjt:  MQEEERLFQEKEFEQAFFREFWPENV

A0A6J1CAQ8 G patch domain and ankyrin repeat-containing protein 1 homolog3.7e-4881.75Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
        M+ ES  GG+VSA AIDSSNIGF+LLKKHGWREGTGLGVSEQGRLEPVQ SVKNNKRGLGADKVKKK+KET D A SDRKNNQE PP KK K L+K  RK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK

Query:  MQEEERLFQEKEFEQAFFREFWPENV
        MQEE+R+FQEKEFE+AFFREFWP+NV
Subjt:  MQEEERLFQEKEFEQAFFREFWPENV

A0A6J1G054 G patch domain and ankyrin repeat-containing protein 1 homolog1.5e-4984.92Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK
        MDLESG GGSVSA AIDSSNIGF+LLKKHGWREGTGLG+SEQGRLEPVQ SVKNNKRGLGADKVKKK+KETTD A SD K NQERPP KKAK ++K+MRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK

Query:  MQEEERLFQEKEFEQAFFREFWPENV
        M EEERLF+EKEFE+AFFREFWP+NV
Subjt:  MQEEERLFQEKEFEQAFFREFWPENV

SwissProt top hitse value%identityAlignment
A0JMV4 RNA-binding protein 5-A4.4e-0652.17Show/hide
Query:  IDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Subjt:  IDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA

A2A6A1 G patch domain-containing protein 88.9e-0755.56Show/hide
Query:  IDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG
        I+S NIG RLL+KHGW+ G GLG S QGR +P+   VK +  G+G
Subjt:  IDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG

F4JCU0 SUPPRESSOR OF ABI3-52.6e-0649.02Show/hide
Query:  AIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK
        AID SN+G R+L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Subjt:  AIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK

Q6C233 Protein SQS14.0e-0757.14Show/hide
Query:  AAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA
        A AID SNIG  LL+K GW  G GLG   +G  EP+ A VK +KRG+GA
Subjt:  AAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA

Q9UKJ3 G patch domain-containing protein 88.9e-0755.56Show/hide
Query:  IDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG
        I+S NIG RLL+KHGW+ G GLG S QGR +P+   VK +  G+G
Subjt:  IDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG

Arabidopsis top hitse value%identityAlignment
AT3G52350.1 D111/G-patch domain-containing protein2.2e-2453.91Show/hide
Query:  AAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEK
        + AI SSNIGF+LLKKHGW+EGTGLG++EQG L P+QA  K+NK+GLGA+K  K+K  +  D A  +          KK+K L+K++ KM E E+   E 
Subjt:  AAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEK

Query:  EFEQAFFREFWPENV
        EFE+AF REFWP+NV
Subjt:  EFEQAFFREFWPENV

AT3G54230.1 suppressor of abi3-51.8e-0749.02Show/hide
Query:  AIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK
        AID SN+G R+L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Subjt:  AIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK

AT3G54230.2 suppressor of abi3-51.8e-0749.02Show/hide
Query:  AIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK
        AID SN+G R+L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Subjt:  AIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK

AT5G08535.1 D111/G-patch domain-containing protein9.4e-2855.83Show/hide
Query:  GGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEER
        G S S AAI+SSNIGF+LLKKHGW+EGTGLG++EQG L P+QA  K+NKRG+GA +  K+K+ +            ++    K++K L+K+MRKM E E+
Subjt:  GGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEER

Query:  LFQEKEFEQAFFREFWPENV
          QEKEFE+AFFREFWP+NV
Subjt:  LFQEKEFEQAFFREFWPENV

AT5G08535.2 D111/G-patch domain-containing protein9.4e-2855.83Show/hide
Query:  GGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEER
        G S S AAI+SSNIGF+LLKKHGW+EGTGLG++EQG L P+QA  K+NKRG+GA +  K+K+ +            ++    K++K L+K+MRKM E E+
Subjt:  GGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEER

Query:  LFQEKEFEQAFFREFWPENV
          QEKEFE+AFFREFWP+NV
Subjt:  LFQEKEFEQAFFREFWPENV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGAGTCGGGCCCAGGGGGTTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCGGCTTTTGAAGAAGCATGGTTGGAGGGAAGGGACGGGCCT
TGGAGTTTCTGAGCAGGGTAGACTGGAACCCGTACAGGCGTCTGTGAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGTGAAGAAGAAAATTAAAGAAACTACAGATA
ATGCAACCTCAGATAGAAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGCGAAGGGGCTAACGAAAAGGATGAGGAAGATGCAAGAGGAAGAGAGGCTATTTCAGGAG
AAGGAATTTGAACAAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAGGCGGAATAGAGAGAACTTACTACCTCAATGGAAAGTCGCCATTTTTGCAAGGTGTCATCCGTTCTTCAGAATCAAGAAACAAAAAAAAAGTTAAAAACTCCACAC
GCTAGGGCTTAGGCGAAAGTGCGAAAGTTCTACAAATTTCGAATTGGGTTCGGTCTTTGTAAACAAAATAGCCGTCTAAGAATTATCTTAAGATTACCCACAAGTCCTTT
TTCAGGAGGAAGAATGGATTTGGAGTCGGGCCCAGGGGGTTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCGGCTTTTGAAGAAGCATGGTTGGAGGG
AAGGGACGGGCCTTGGAGTTTCTGAGCAGGGTAGACTGGAACCCGTACAGGCGTCTGTGAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGTGAAGAAGAAAATTAAA
GAAACTACAGATAATGCAACCTCAGATAGAAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGCGAAGGGGCTAACGAAAAGGATGAGGAAGATGCAAGAGGAAGAGAG
GCTATTTCAGGAGAAGGAATTTGAACAAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGATACATTAACTCTACATATCATCATTGTTAAGTAAATTCAGATTCTT
TGTCAAAAGCCTTTGCAGTCACCAAGTAGAGTTTGTAAATATGATTACACCAAACAATGTTGTAAAATTTAATTATACCCTTTTTGAGCCTCAAC
Protein sequenceShow/hide protein sequence
MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQE
KEFEQAFFREFWPENV