; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G20540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G20540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr5:21595803..21597207
RNA-Seq ExpressionCSPI05G20540
SyntenyCSPI05G20540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648629.1 hypothetical protein Csa_008322 [Cucumis sativus]3.6e-23100Show/hide
Query:  MALCSSVSTLSSKPAPEIILKYFESMVSGKISKSPAPSCLENLMRRSNARRLNLARFSEIES
        MALCSSVSTLSSKPAPEIILKYFESMVSGKISKSPAPSCLENLMRRSNARRLNLARFSEIES
Subjt:  MALCSSVSTLSSKPAPEIILKYFESMVSGKISKSPAPSCLENLMRRSNARRLNLARFSEIES
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTTGCTCTTCTGTATCAACTCTATCTTCCAAGCCAGCCCCTGAAATCATACTCAAATATTTTGAATCGATGGTTTCGGGAAAAATATCAAAGTCTCCGGCTCC
GAGTTGCTTGGAAAATTTGATGAGAAGAAGCAACGCAAGGAGGCTGAATCTGGCAAGGTTTTCTGAGATTGAATCAGTTCAACTTTTAACGTTGCATGTCCCTTACCGGG
TGTTAAATTTTTTTCTTATGGATGAGCTTAGAATGCCAAGATACAAGGAAGCCATGCCTACTCCATCTTCTGAATTGGAAACGTTGAGATACCGTTTGGGCAGCATGGGC
AATCCTACTGACGAGGACGAACAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTTGCTCTTCTGTATCAACTCTATCTTCCAAGCCAGCCCCTGAAATCATACTCAAATATTTTGAATCGATGGTTTCGGGAAAAATATCAAAGTCTCCGGCTCC
GAGTTGCTTGGAAAATTTGATGAGAAGAAGCAACGCAAGGAGGCTGAATCTGGCAAGGTTTTCTGAGATTGAATCAGTTCAACTTTTAACGTTGCATGTCCCTTACCGGG
TGTTAAATTTTTTTCTTATGGATGAGCTTAGAATGCCAAGATACAAGGAAGCCATGCCTACTCCATCTTCTGAATTGGAAACGTTGAGATACCGTTTGGGCAGCATGGGC
AATCCTACTGACGAGGACGAACAAAAATGACCATTTGCCCTTCTGAACTGTTAAGTCTAGAAGCGGATTCTCGTTTTGATCTGGAAGATCAGCATCACAACATTGGAGAA
AAGGCATTGAGGATTCCAGTGTTGTCTTATCTAAAAGTTAATTTTTATTTTAGTTCTAACCACCATGGGTTAGCCTAGTGGCTATTGAGAGTTACCTATTGGCTTATAGA
Protein sequenceShow/hide protein sequence
MALCSSVSTLSSKPAPEIILKYFESMVSGKISKSPAPSCLENLMRRSNARRLNLARFSEIESVQLLTLHVPYRVLNFFLMDELRMPRYKEAMPTPSSELETLRYRLGSMG
NPTDEDEQK