; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G21430 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G21430
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosomal protein L22p/L17e family protein isoform 1
Genome locationChr5:22171605..22173568
RNA-Seq ExpressionCSPI05G21430
SyntenyCSPI05G21430
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0005840 - ribosome (cellular component)
InterPro domainsIPR035204 - NADH-ubiquinone oxidoreductase 11kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648679.1 hypothetical protein Csa_008887 [Cucumis sativus]1.4e-6290.44Show/hide
Query:  MDFVHSSSSFSPAGELQFTEEEISIPAIDFR-------------EMKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWT
        MDFVHSSSSFSPAGELQFTEEEISIPAIDFR             EMKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWT
Subjt:  MDFVHSSSSFSPAGELQFTEEEISIPAIDFR-------------EMKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWT

Query:  FDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
        FDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
Subjt:  FDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
XP_008446038.1 PREDICTED: uncharacterized protein LOC103488888 [Cucumis melo]3.5e-4594.51Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
        MKFIMEFAEDLVLRLMEDPKERDRRFREH+YA+KDRCQKTKEMWS PLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDD+LQDFNN+SK
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
XP_011655561.1 uncharacterized protein LOC101213251 [Cucumis sativus]4.9e-47100Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
        MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
XP_022151828.1 uncharacterized protein LOC111019716 [Momordica charantia]6.2e-4286.81Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
        MKF+MEFAE+LV+RLMEDPKERDR+FREH+YA+KDRCQKTKEMWSYPLRPYGFWTF+RHNSQL+WD QISQ PGRRDPYDDMLQD NN+SK
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
XP_038891434.1 uncharacterized protein LOC120080854 [Benincasa hispida]9.5e-4389.01Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
        MKF+MEFAE+LVLRLMEDPKERDR+FREH+YA+KDRCQKTKEMWSYPLRPYGFWTF+RHNSQLKWD QISQ PGRRDPYDDMLQD NN+SK
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
TrEMBL top hitse value%identityAlignment
A0A1S3BE41 uncharacterized protein LOC1034888881.7e-4594.51Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
        MKFIMEFAEDLVLRLMEDPKERDRRFREH+YA+KDRCQKTKEMWS PLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDD+LQDFNN+SK
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
A0A5A7SSK1 Uncharacterized protein1.7e-4594.51Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
        MKFIMEFAEDLVLRLMEDPKERDRRFREH+YA+KDRCQKTKEMWS PLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDD+LQDFNN+SK
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
A0A6J1DD92 uncharacterized protein LOC1110197163.0e-4286.81Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
        MKF+MEFAE+LV+RLMEDPKERDR+FREH+YA+KDRCQKTKEMWSYPLRPYGFWTF+RHNSQL+WD QISQ PGRRDPYDDMLQD NN+SK
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
A0A6J1GWE2 uncharacterized protein LOC1114581901.5e-4185.71Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
        MKFIMEFAE+LVLRLMEDPKERDR+FREH+YA+KDRCQKTKEMWSYP+RPYGFWTF+RHN QL+WD QISQVPGRRDPYDD+L D NN+SK
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
A0A6J1K907 uncharacterized protein LOC1114933471.5e-4185.71Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
        MKFIMEFAE+LVLRLMEDPKERDR+FREH+YA+KDRCQKTKEMWSYP+RPYGFWTF+RHN QL+WD QISQVPGRRDPYDD+L D NN+SK
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQDFNNSSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67350.1 unknown protein3.2e-3675.29Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQD
        M FIMEFAE+LVLRLME+P+ERDR+ REHIY + +RC+K KEMW+ P+RPYGFWTF+RHN+QL+WDPQISQV GRRDPYDD+L+D
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQD
AT1G67350.2 unknown protein3.2e-3675.29Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQD
        M FIMEFAE+LVLRLME+P+ERDR+ REHIY + +RC+K KEMW+ P+RPYGFWTF+RHN+QL+WDPQISQV GRRDPYDD+L+D
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDPYDDMLQD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGTTCATTCTTCGAGTTCATTTTCTCCCGCGGGTGAACTTCAGTTTACTGAGGAAGAAATCTCAATTCCTGCAATCGACTTTCGAGAAATGAAGTTCATTAT
GGAGTTTGCTGAGGATTTGGTATTGAGACTTATGGAGGATCCAAAAGAGAGAGATCGCAGATTCAGAGAGCATATTTATGCGATCAAGGATCGGTGCCAAAAGACAAAGG
AGATGTGGAGCTATCCTCTTCGTCCTTATGGATTTTGGACGTTTGACCGCCACAATTCTCAGCTGAAGTGGGACCCACAAATTAGTCAAGTTCCTGGTAGGAGGGATCCT
TATGATGATATGCTTCAGGACTTCAACAATAGCTCAAAGTGA
mRNA sequenceShow/hide mRNA sequence
AATGGGAAATTAGATGGATTTTGTTCATTCTTCGAGTTCATTTTCTCCCGCGGGTGAACTTCAGTTTACTGAGGAAGAAATCTCAATTCCTGCAATCGACTTTCGAGAAA
TGAAGTTCATTATGGAGTTTGCTGAGGATTTGGTATTGAGACTTATGGAGGATCCAAAAGAGAGAGATCGCAGATTCAGAGAGCATATTTATGCGATCAAGGATCGGTGC
CAAAAGACAAAGGAGATGTGGAGCTATCCTCTTCGTCCTTATGGATTTTGGACGTTTGACCGCCACAATTCTCAGCTGAAGTGGGACCCACAAATTAGTCAAGTTCCTGG
TAGGAGGGATCCTTATGATGATATGCTTCAGGACTTCAACAATAGCTCAAAGTGATTTGTGAAGAATATTTGCAAGACCTCAATAATTCGGTGGTGGAAGCGGGGAAGCT
CTCAAGCAATTTGTTTGAACGTTTGTTTATTGCTGTTTAATTTCTCGTGCTGTTAAGGAAGCACTTTGTGGGTTTGTATTGTCAAACAGAGATTTTGGTGCTGGAATAAA
CATTTTTAGCTCATAAGACTAAAAATTTCAAGTTGGTGAATTTGAGAAACCGATACCATCATTTTGTATTAGTGTTTTAAGTATACATCACTTGGAATTTCTTCTTATAG
TTGATATTGATATCAAATGTTATTCATGGAGTTCTTGGTGGATTAATTCCTGATAATTTTTCGTGGAAGCCATCAAAGTAGTTGAAGCTAAGGTAATCTTAAGCCGAGCA
GTGGGCTTTTGGAAATTGTACATGCTTTTCTCCTATTTTCTTTACTCTAGTTTTCATCTTTTTCAAG
Protein sequenceShow/hide protein sequence
MDFVHSSSSFSPAGELQFTEEEISIPAIDFREMKFIMEFAEDLVLRLMEDPKERDRRFREHIYAIKDRCQKTKEMWSYPLRPYGFWTFDRHNSQLKWDPQISQVPGRRDP
YDDMLQDFNNSSK