; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G21510 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G21510
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionnuclear pore complex protein NUP54
Genome locationChr5:22226284..22230840
RNA-Seq ExpressionCSPI05G21510
SyntenyCSPI05G21510
Gene Ontology termsGO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0036228 - protein localization to nuclear inner membrane (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR024864 - Nucleoporin Nup54/Nup57/Nup44
IPR025712 - Nucleoporin Nup54, alpha-helical domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573649.1 Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. sororia]6.4e-18689.69Show/hide
Query:  FGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATG
        FG   S+ AFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGN SSTPAFGTPS+SSFATGFGSSLFSTPFSSQPSQ QQQ QQSP+F   +ATG
Subjt:  FGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATG

Query:  FGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERLW
        FGFQTPF APQS+PFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYR KP GVSDIMWAEAMAKLEGMESADRERLW
Subjt:  FGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERLW

Query:  PQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQ
        PQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVK LQRHFLADTLPW+QRLKQKEQGLQR LLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQ
Subjt:  PQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQ

Query:  LKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        L+GSGAELSRRV+NLLT+T GQANGSG GNSIY QGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DD S
Subjt:  LKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_004135312.1 nuclear pore complex protein NUP54 [Cucumis sativus]2.0e-208100Show/hide
Query:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
        MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
Subjt:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT

Query:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_008446043.1 PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo]3.7e-20297.17Show/hide
Query:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
        MFGAQ SSSAFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQS +FPQSSAT
Subjt:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT

Query:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF APQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KPPGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELS+RVQNLLT+TRGQANGSGPGNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_022151739.1 nuclear pore complex protein NUP54 [Momordica charantia]2.2e-18691.26Show/hide
Query:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
        MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPSTS+F TGFGSSLFSTPFSSQPSQQ QQ QQSP+F Q  AT
Subjt:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT

Query:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF APQSTPFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R KP GVSDIMWAEAM KLEGMESADRERL
Subjt:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSRRVQNLLT TRGQANGS  GNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DDAS
Subjt:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_038893426.1 nuclear pore complex protein NUP54 [Benincasa hispida]1.7e-19995.89Show/hide
Query:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
        MFGAQPSSSAFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQ QQQLQQSP+FPQ +AT
Subjt:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT

Query:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF APQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDS+RLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSRRVQNLLT+TRGQANGS  GNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAED+EM DDAS
Subjt:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPW8 Nup54 domain-containing protein9.9e-209100Show/hide
Query:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
        MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
Subjt:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT

Query:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A1S3BE47 nuclear pore complex protein NUP541.8e-20297.17Show/hide
Query:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
        MFGAQ SSSAFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQS +FPQSSAT
Subjt:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT

Query:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF APQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KPPGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELS+RVQNLLT+TRGQANGSGPGNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A5A7SSX4 Nuclear pore complex protein NUP541.8e-20297.17Show/hide
Query:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
        MFGAQ SSSAFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQS +FPQSSAT
Subjt:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT

Query:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF APQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KPPGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELS+RVQNLLT+TRGQANGSGPGNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A6J1DDY9 nuclear pore complex protein NUP541.1e-18691.26Show/hide
Query:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
        MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPSTS+F TGFGSSLFSTPFSSQPSQQ QQ QQSP+F Q  AT
Subjt:  MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT

Query:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF APQSTPFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R KP GVSDIMWAEAM KLEGMESADRERL
Subjt:  GFGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSRRVQNLLT TRGQANGS  GNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DDAS
Subjt:  QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A6J1G105 nuclear pore complex protein NUP541.7e-18489.43Show/hide
Query:  FGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATG
        FG   S+ AFGTPQS+PAFGTPQSTPAFGTP STPAFGTPSASPAFGN SSTPAFGTPS+SSFATGFGSSLFSTPFSSQPSQQQQ  QQSP+F   +ATG
Subjt:  FGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATG

Query:  FGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERLW
        FGFQTPF APQS+PFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYR KP GVSDIMWAEAMAKLEGMESADRERLW
Subjt:  FGFQTPFTAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERLW

Query:  PQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQ
        PQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVK LQRHFLADTLPW+QRLKQKEQGLQR LLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQ
Subjt:  PQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQ

Query:  LKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        L+GSGAELSRRV+NLLT+T GQANGSG GNSIY QGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DD S
Subjt:  LKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

SwissProt top hitse value%identityAlignment
P70582 Nuclear pore complex protein Nup541.5e-0725.37Show/hide
Query:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVE
        P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    T+  + + K+K   L    L+V+   E
Subjt:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTVTRGQAN-GSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q + G+      Y+     I    L ++++ L+QQ E ++ L +++K D+ 
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTVTRGQAN-GSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR

Query:  DMEII
        D++++
Subjt:  DMEII

Q7Z3B4 Nucleoporin p545.5e-0724.88Show/hide
Query:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVE
        P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    ++  + + K+K   L    L+V+   E
Subjt:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTVTRGQAN-GSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q + G+      Y+     I    L ++++ L+QQ E ++ L +++K D+ 
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTVTRGQAN-GSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR

Query:  DMEII
        D++++
Subjt:  DMEII

Q8BTS4 Nuclear pore complex protein Nup541.5e-0725.37Show/hide
Query:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVE
        P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    T+  + + K+K   L    L+V+   E
Subjt:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTVTRGQAN-GSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q + G+      Y+     I    L ++++ L+QQ E ++ L +++K D+ 
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTVTRGQAN-GSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR

Query:  DMEII
        D++++
Subjt:  DMEII

Q8GYF7 Nuclear pore complex protein NUP541.6e-13970.63Show/hide
Query:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQLQQ----SPMFPQSSATGFGFQTPFT----A
        FGTP S+P+FGTP+STPAFGT  +SPAFG  S+TPAFGTPS  SF++ GFGSSLFS+PFSSQ  QQQQQ QQ    S +F Q  ++ FGFQ+PF      
Subjt:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQLQQ----SPMFPQSSATGFGFQTPFT----A

Query:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
         Q TPFPNAQLTTQMAPVAP+P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KP  VSDIMWAEAM+KLEGM+S +RERLWPQLVQGFKD
Subjt:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQR +LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Subjt:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA
        RRVQ+L T++R QAN    G+S+Y  GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++AED EMA D+
Subjt:  RRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA

Q9VDV3 Nuclear pore complex protein Nup581.2e-0940.88Show/hide
Query:  FGAQPSSS-AFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT
        FGA  +++ AFGT  ++PAFG P +T AFG PA+TPAFG  +A+PAFG  ++TPAFG P+ +S    FG+   +T F +  S Q            + A 
Subjt:  FGAQPSSS-AFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSAT

Query:  GFGFQTPFT-APQSTPFPNAQLTTQMAPVAPLPFSLA
         F F TP T AP + P      TT     A +P SL+
Subjt:  GFGFQTPFT-APQSTPFPNAQLTTQMAPVAPLPFSLA

Arabidopsis top hitse value%identityAlignment
AT1G24310.1 unknown protein1.1e-14070.63Show/hide
Query:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQLQQ----SPMFPQSSATGFGFQTPFT----A
        FGTP S+P+FGTP+STPAFGT  +SPAFG  S+TPAFGTPS  SF++ GFGSSLFS+PFSSQ  QQQQQ QQ    S +F Q  ++ FGFQ+PF      
Subjt:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQLQQ----SPMFPQSSATGFGFQTPFT----A

Query:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
         Q TPFPNAQLTTQMAPVAP+P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KP  VSDIMWAEAM+KLEGM+S +RERLWPQLVQGFKD
Subjt:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQR +LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Subjt:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA
        RRVQ+L T++R QAN    G+S+Y  GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++AED EMA D+
Subjt:  RRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAATCAAGTCCGGCCTTTGGCACTCCGCAATCAACTCCGGCATTTGGCACGCCGGCGTCCACTCCTGC
CTTTGGAACTCCATCGGCGTCTCCTGCATTTGGCAATCTTTCCTCAACTCCTGCCTTCGGAACTCCATCTACGTCGTCGTTTGCTACCGGCTTCGGCTCCTCTCTCTTCT
CTACTCCATTCTCTTCTCAGCCTTCACAACAGCAACAGCAGTTGCAGCAATCGCCGATGTTTCCGCAATCATCCGCTACAGGATTCGGTTTCCAGACTCCGTTTACTGCG
CCTCAGTCCACTCCATTTCCAAATGCTCAACTGACCACTCAAATGGCTCCGGTCGCACCGCTTCCTTTCTCCCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTA
CAAGGACGACGCTGGAAACCCTAAGTATGCTTTCAAGCATTTGTTGTTCAGTGTAACTGATCCTCAGTATAGGACGAAGCCTCCTGGTGTATCGGATATAATGTGGGCTG
AGGCAATGGCAAAGCTCGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCGCAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAA
GTCATTCTCTCTGATTCCGAGAGACTACGAATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTCTAGCCGATACTCTACCTTGGGTTCAAAGATTGAAACAGAA
GGAGCAAGGTCTGCAACGGCATCTGTTGAGAGTTATGAGAATTGTGGAGGCACTAGAAAGTAAAGGTTGCCGAGTGCCTGTAATGAAAGGAGAGGCTGAATTGGCAGAGA
AGTTAGCCTTGATAACGAGGCAGTTGAAAGGCTCTGGGGCAGAACTTTCAAGGAGGGTACAAAATTTGCTGACAGTTACTCGTGGGCAAGCAAACGGCTCCGGTCCTGGT
AATTCCATCTATTTTCAAGGATCTGCAAAAATACACGAGCAGAGTCTTGCCGATATGCAGGAGGTTTTACAGCAGCAGACTGAGGCCATTGCTAGACTTGGAAATGTTTT
AAAGCGAGATGTTAGAGACATGGAAATCATAATGGCTGAAGATAAAGAGATGGCAGATGATGCGAGTTGA
mRNA sequenceShow/hide mRNA sequence
CGGGTCGGGTTGTTCATATTTATTACAAATTGAGAAGGGGACGGGTCGGGTTGTTCATATTTATTGATTTTAAAAACAATTCCCAAATAGTTCGCGGCAAAAGGATTGGA
TGCCCTAGACTTGCTTCTTCCCTAAACCCCAACACTGAAATTCCGAGAGAAGCTCCATCTCCTCAAGAACGAGTTCGAGTCTCCAATGGCAATTTCGGTTTGAGACGTCA
GGGTTTCTCTTTGATTCTCCAGCGCAAATACAATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAATCAAGTCCGGCCTTTGGCACTCCGCAATCAACT
CCGGCATTTGGCACGCCGGCGTCCACTCCTGCCTTTGGAACTCCATCGGCGTCTCCTGCATTTGGCAATCTTTCCTCAACTCCTGCCTTCGGAACTCCATCTACGTCGTC
GTTTGCTACCGGCTTCGGCTCCTCTCTCTTCTCTACTCCATTCTCTTCTCAGCCTTCACAACAGCAACAGCAGTTGCAGCAATCGCCGATGTTTCCGCAATCATCCGCTA
CAGGATTCGGTTTCCAGACTCCGTTTACTGCGCCTCAGTCCACTCCATTTCCAAATGCTCAACTGACCACTCAAATGGCTCCGGTCGCACCGCTTCCTTTCTCCCTGGCA
GATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGACGCTGGAAACCCTAAGTATGCTTTCAAGCATTTGTTGTTCAGTGTAACTGATCCTCAGTATAGGACGAA
GCCTCCTGGTGTATCGGATATAATGTGGGCTGAGGCAATGGCAAAGCTCGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCGCAGCTTGTTCAAGGTTTTAAGG
ATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTCTCTGATTCCGAGAGACTACGAATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTCTAGCCGAT
ACTCTACCTTGGGTTCAAAGATTGAAACAGAAGGAGCAAGGTCTGCAACGGCATCTGTTGAGAGTTATGAGAATTGTGGAGGCACTAGAAAGTAAAGGTTGCCGAGTGCC
TGTAATGAAAGGAGAGGCTGAATTGGCAGAGAAGTTAGCCTTGATAACGAGGCAGTTGAAAGGCTCTGGGGCAGAACTTTCAAGGAGGGTACAAAATTTGCTGACAGTTA
CTCGTGGGCAAGCAAACGGCTCCGGTCCTGGTAATTCCATCTATTTTCAAGGATCTGCAAAAATACACGAGCAGAGTCTTGCCGATATGCAGGAGGTTTTACAGCAGCAG
ACTGAGGCCATTGCTAGACTTGGAAATGTTTTAAAGCGAGATGTTAGAGACATGGAAATCATAATGGCTGAAGATAAAGAGATGGCAGATGATGCGAGTTGAAAGAGATT
GAGTTTCCCATTTCTAGCCATTCTTCTGCTGTGTCGTTCGTTATTAAAGTATACTTGGCTTGATTATTTTTCCAAATGGAAAAGTTAAAATTCGTTTCTGTAAAACTTTT
ATGTACTAGTCTGCTCAAGGGTGCTATCCCACATCTTATAGAGAGAAGTGTGTTAGTACAGTTCGGTTAAGATAGGTTAAACTTTTAACTGCTTAATACCTATATGCAAT
TTTGATTTGATGCAGTGTTTAAAGGCTGAGAACTGTAGTGGCTCTTAAAGTACTCAGCATCGTCATGCAAGGCCTTGGATTCATCTTTCCCCCTTGTCAGGTGCGTGAGA
TGGCCTCTCACTTTAAAATCTTACCATGTGGGAGTGTTACCTCTCTTATTCTATCATCTAAAAAGCTTTTGGAAAAGGGGG
Protein sequenceShow/hide protein sequence
MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATGFGFQTPFTA
PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDE
VILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTVTRGQANGSGPG
NSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS