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CSPI05G21790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G21790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationChr5:22417202..22418211
RNA-Seq ExpressionCSPI05G21790
SyntenyCSPI05G21790
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034227.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]6.9e-2985.9Show/hide
Query:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKK-NQKHKYPRKQKG
        M SAQKGPFLPKFGDWDE+NPAAAEGFTVIFNRARDNKKNGG AGTPNNVIPPQN++QK EPAK+  QK KYPRKQ G
Subjt:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKK-NQKHKYPRKQKG

XP_004135294.1 protein NOI4 [Cucumis sativus]2.4e-42100Show/hide
Query:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKYPRKQKGWCGCFW
        MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKYPRKQKGWCGCFW
Subjt:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKYPRKQKGWCGCFW

XP_008446098.1 PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]4.9e-3586.9Show/hide
Query:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKK-NQKHKYPRKQKGWCGCFW
        M SAQKGPFLPKFGDWDE+NPAAAEGFTVIFNRARDNKKNGG AGTPNNVIPPQN++QK EPAK+  QK KYPRKQKGWC CFW
Subjt:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKK-NQKHKYPRKQKGWCGCFW

XP_038892913.1 protein NOI4-like isoform X1 [Benincasa hispida]3.1e-2977.38Show/hide
Query:  AQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQ----KYEPAKKNQKHKYPRKQKGWCGCFW
        A KGPFLPKFG+WDE+NPAAAEGFTVIF+RARDNKKNGG  GTPNNVIP QNQ+Q    K+E AKKN +H+YPRKQKGW  CFW
Subjt:  AQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQ----KYEPAKKNQKHKYPRKQKGWCGCFW

XP_038892914.1 protein NOI4-like isoform X2 [Benincasa hispida]3.4e-2877.78Show/hide
Query:  GPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQ----KYEPAKKNQKHKYPRKQKGWCGCFW
        GPFLPKFG+WDE+NPAAAEGFTVIF+RARDNKKNGG  GTPNNVIP QNQ+Q    K+E AKKN +H+YPRKQKGW  CFW
Subjt:  GPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQ----KYEPAKKNQKHKYPRKQKGWCGCFW

TrEMBL top hitse value%identityAlignment
A0A0A0KTF9 AvrRpt-cleavage domain-containing protein1.2e-42100Show/hide
Query:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKYPRKQKGWCGCFW
        MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKYPRKQKGWCGCFW
Subjt:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKYPRKQKGWCGCFW

A0A1S3BEY0 RPM1-interacting protein 4-like2.4e-3586.9Show/hide
Query:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKK-NQKHKYPRKQKGWCGCFW
        M SAQKGPFLPKFGDWDE+NPAAAEGFTVIFNRARDNKKNGG AGTPNNVIPPQN++QK EPAK+  QK KYPRKQKGWC CFW
Subjt:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKK-NQKHKYPRKQKGWCGCFW

A0A5D3CUX8 RPM1-interacting protein 4-like3.3e-2985.9Show/hide
Query:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKK-NQKHKYPRKQKG
        M SAQKGPFLPKFGDWDE+NPAAAEGFTVIFNRARDNKKNGG AGTPNNVIPPQN++QK EPAK+  QK KYPRKQ G
Subjt:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKK-NQKHKYPRKQKG

A0A6J1DEH9 RPM1-interacting protein 4-like4.2e-1658.54Show/hide
Query:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKYPRKQKGWCGCF
        MAS   G  LPKFG+WD ++PA+AEGFT+IFN+ARDNKKNGG   T   VI  + Q+QK+E +KKN K+++PRK K W  CF
Subjt:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKYPRKQKGWCGCF

A0A6J1G0L7 RPM1-interacting protein 4-like2.0e-2164.84Show/hide
Query:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQ------SQKYEPAKKNQKHKYPRKQKG--WCGCFW
        M SA +G  LPKFG+WDE++PAAAEGFTVIF+RARD KKNG   GTPNNVIP +NQ      S+ +E AKKNQK KYPRK+K    C CFW
Subjt:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQ------SQKYEPAKKNQKHKYPRKQKG--WCGCFW

SwissProt top hitse value%identityAlignment
O22633 Protein NOI44.4e-1050.77Show/hide
Query:  AQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQK
        + KG  LPKFG+WD  +PA+AEGFTVIFN+ARD KK GG  G+P        +S   +P+K   K
Subjt:  AQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQK

Q8GYN5 RPM1-interacting protein 42.9e-0645.1Show/hide
Query:  SAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNG----GAAGTPNN
        S +K   +PKFGDWDE NP++A+G+T IFN+ R+ + +G    G++ TP +
Subjt:  SAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNG----GAAGTPNN

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein5.3e-1151.56Show/hide
Query:  AQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY--EPAKK
        A KG  LPKFG+WD  +P++AEGFTVIFN+AR+ KK GG + +P    P  N++ +   +PAKK
Subjt:  AQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY--EPAKK

AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein9.7e-1345.16Show/hide
Query:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKK--NGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKY---------PRKQKGWCGCF
        MA+  +   LPKFG+WD  NP +AEGFTVIFN+ARD+KK      AG  + V PP+N+    EP K N  H +         PR +K W  CF
Subjt:  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKK--NGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKY---------PRKQKGWCGCF

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein4.1e-1152.46Show/hide
Query:  AQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAK
        + KG  LPKFG+WD  +PA+AEGFTVIFN+ARD KK GG  G+P        +S   +P+K
Subjt:  AQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAK

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein5.3e-1154.24Show/hide
Query:  KGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAK
        KG  LPKFG+WD  +PA+AEGFTVIFN+ARD KK GG  G+P        +S   +P+K
Subjt:  KGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAK

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein4.1e-1152.38Show/hide
Query:  KGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQK
        KG  LPKFG+WD  +PA+AEGFTVIFN+ARD KK GG  G+P        +S   +P+K   K
Subjt:  KGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAGCTCAAAAGGGTCCATTTCTTCCTAAATTTGGTGATTGGGATGAACAAAATCCTGCTGCTGCTGAAGGGTTTACTGTGATTTTCAACAGGGCAAGAGATAA
TAAGAAGAATGGTGGAGCAGCTGGAACTCCTAATAATGTGATACCACCCCAAAACCAAAGTCAAAAGTATGAACCTGCTAAGAAGAATCAGAAGCACAAGTATCCAAGGA
AGCAGAAAGGATGGTGTGGCTGCTTTTGGTAG
mRNA sequenceShow/hide mRNA sequence
CTTTTGAGCCCTTTGAAACTCTCTGACGCGTTGAACATAGCCCATAATCCTCTATAAGAAACCCCATATTTCATCTTCTTCTTCAACCACAACTCTTTATTCTTCTTCTC
CTTCATCTGCTGAACTACTCTTTGAATTACCCATTTCCTCAAAACTGCAATATTCTTCAATTATGGCTTCAGCTCAAAAGGGTCCATTTCTTCCTAAATTTGGTGATTGG
GATGAACAAAATCCTGCTGCTGCTGAAGGGTTTACTGTGATTTTCAACAGGGCAAGAGATAATAAGAAGAATGGTGGAGCAGCTGGAACTCCTAATAATGTGATACCACC
CCAAAACCAAAGTCAAAAGTATGAACCTGCTAAGAAGAATCAGAAGCACAAGTATCCAAGGAAGCAGAAAGGATGGTGTGGCTGCTTTTGGTAGACGAGTTTTTGTCACA
TTGAAAGAAGACAAAAAATTCTTCTGTTTGTGGTTGGTGGCTTTCTTGAGTATTGATGGATGCTGTTAGATTCAATTTATTGTGTTGTATAAAGTT
Protein sequenceShow/hide protein sequence
MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKYPRKQKGWCGCFW