CuGenDBv2

Gene ID	CSPI05G22140
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Coilin
Genome location	Chr5:22636398..22641555
RNA-Seq Expression	CSPI05G22140
Synteny	CSPI05G22140
Gene Ontology terms	GO:0006396 - RNA processing (biological process) GO:0005634 - nucleus (cellular component) GO:0017069 - snRNA binding (molecular function)
InterPro domains	IPR024822 - Coilin IPR031722 - Coilin, N-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034262.1 coilin isoform X1 [Cucumis melo var. makuwa]

0.0e+00

94.29

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Query:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
        MMEAVRLRVSFKDKDLLTDSLTGLSRSWI LKPHLRTISDLSSYILSVF LHDACPNGVILSMDGFVLPPFESVCILKD+DIVRVKKKKSKATILG G+R
Subjt:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
        LIETEEFRERKPVD GVK LADKEFENESNGYESQSEEDE NATL VKAVPVGKKVSKKRKASKII  SKRKKNKSSPTEEFPTI+ADV+H+DEKHEE+N
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN

Query:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAER-VDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQ
        HLKS+LPQKVLVSKKDSSSSSSECDSDTSS++EIGG+SNNIIKSTTNAER VDQLGAG  HVELSDTAGESKK PSRSTRRKKAKRRWLRERAQNEEQQQ
Subjt:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAER-VDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQ

Query:  QLFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSET
        QLFET+L+QGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEK+NHFPKETLHWNGITNKKKGQKWGKEK+PSWKRNNSN C+SEPLQLLSET
Subjt:  QLFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSET

Query:  EQPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLK
        EQPKTPVPVVGSINFDE RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYP+PVKKEIDEDSELQ DTTPYGEDGSLK
Subjt:  EQPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLK

Query:  IDFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSAL
        IDFASLVDLR+IRQGNLDSSRTAVNQEITSKQIAESSKHVHNN DANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQE+SSGRKSWSYRALRGSAL
Subjt:  IDFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSAL

Query:  GPTMALLRSQKEL
        GPTMALLRSQKEL
Subjt:  GPTMALLRSQKEL

XP_008446142.1 PREDICTED: coilin isoform X1 [Cucumis melo]

0.0e+00

94.44

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Query:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
        MMEAVRLRVSFKDKDLLTDSLTGLSRSWI LKPHLRTISDLSSYILSVF LHDACPNGVILSMDGFVLPPFESVCILKD+DIVRVKKKKSKATILG G+R
Subjt:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
        LIETEEFRERKPVD GVK LADKEFENESNGYESQSEEDE NATL VKAVPVGKKVSKKRKASKII  SKRKKNKSSPTEEFPTI+ADV+H+DEKHEE+N
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN

Query:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ
        HLKS+LPQKVLVSKKDSSSSSSECDSDTSS++EIGG+SNNIIKSTTNAERVDQLGAG  HVELSDTAGESKK PSRSTRRKKAKRRWLRERAQNEEQQQQ
Subjt:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ

Query:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE
        LFET+L+QGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEK+NHFPKETLHWNGITNKKKGQKWGKEK+PSWKRNNSN C+SEPLQLLSETE
Subjt:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE

Query:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
        QPKTPVPVVGSINFDE RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYP+PVKKEIDEDSELQ DTTPYGEDGSLKI
Subjt:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI

Query:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
        DFASLVDLR+IRQGNLDSSRTAVNQEITSKQIAESSKHVHNN DANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQE+SSGRKSWSYRALRGSALG
Subjt:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG

Query:  PTMALLRSQKEL
        PTMALLRSQKEL
Subjt:  PTMALLRSQKEL

XP_008446143.1 PREDICTED: coilin isoform X2 [Cucumis melo]

0.0e+00

94.12

Show/hide

Query:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
        MMEAVRLRVSFKDKDLLTDSLTGLSRSWI LKPHLRTISDLSSYILSVF LHDACPNGVILSMDGFVLPPFESVCILKD+DIVRVKKKKSKATILG G+R
Subjt:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
        LIETEEFRERKPVD GVK LADKEFENESNGYESQSEEDE NATL VKAVPVGKKVSKKRKASKII  SKRKKNKSSPTEEFPTI+ADV+H+DEKHEE+N
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN

Query:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ
        HLKS+LPQKVLVSKKDSSSSSSECDSDTSS++EIGG+SNNIIKSTTNAERVDQLGAG  HVELSDTAGESKK PSRSTRRKKAKRRWLRERAQNEE  QQ
Subjt:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ

Query:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE
        LFET+L+QGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEK+NHFPKETLHWNGITNKKKGQKWGKEK+PSWKRNNSN C+SEPLQLLSETE
Subjt:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE

Query:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
        QPKTPVPVVGSINFDE RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYP+PVKKEIDEDSELQ DTTPYGEDGSLKI
Subjt:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI

Query:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
        DFASLVDLR+IRQGNLDSSRTAVNQEITSKQIAESSKHVHNN DANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQE+SSGRKSWSYRALRGSALG
Subjt:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG

Query:  PTMALLRSQKEL
        PTMALLRSQKEL
Subjt:  PTMALLRSQKEL

XP_031741125.1 coilin isoform X1 [Cucumis sativus]

0.0e+00

99.35

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Query:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
        MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILS+FCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
Subjt:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
        LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN

Query:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ
        HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ
Subjt:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ

Query:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE
        LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEK+PSWKRNNSNDCSSEPLQLLSETE
Subjt:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE

Query:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
        QPKTPVPVVGSINFDE RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
Subjt:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI

Query:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
        DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDAN+TRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
Subjt:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG

Query:  PTMALLRSQKEL
        PTMALLRSQKEL
Subjt:  PTMALLRSQKEL

XP_031741126.1 coilin isoform X2 [Cucumis sativus]

0.0e+00

99.02

Show/hide

Query:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
        MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILS+FCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
Subjt:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
        LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN

Query:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ
        HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEE  QQ
Subjt:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ

Query:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE
        LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEK+PSWKRNNSNDCSSEPLQLLSETE
Subjt:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE

Query:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
        QPKTPVPVVGSINFDE RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
Subjt:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI

Query:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
        DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDAN+TRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
Subjt:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG

Query:  PTMALLRSQKEL
        PTMALLRSQKEL
Subjt:  PTMALLRSQKEL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTI4 Coilin

8.9e-289

87.25

Show/hide

Query:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
        MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILS+FCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
Subjt:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
        LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN

Query:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ
        HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGE                               
Subjt:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ

Query:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE
                                               +VTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEK+PSWKRNNSNDCSSEPLQLLSETE
Subjt:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE

Query:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
        QPKTPVPVVGSI+FDE  PYT LPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
Subjt:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI

Query:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
        DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDAN+TRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
Subjt:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG

Query:  PTMALLRSQKEL
        PTMALLRSQKEL
Subjt:  PTMALLRSQKEL

A0A1S3BF15 Coilin

0.0e+00

94.44

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Query:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
        MMEAVRLRVSFKDKDLLTDSLTGLSRSWI LKPHLRTISDLSSYILSVF LHDACPNGVILSMDGFVLPPFESVCILKD+DIVRVKKKKSKATILG G+R
Subjt:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
        LIETEEFRERKPVD GVK LADKEFENESNGYESQSEEDE NATL VKAVPVGKKVSKKRKASKII  SKRKKNKSSPTEEFPTI+ADV+H+DEKHEE+N
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN

Query:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ
        HLKS+LPQKVLVSKKDSSSSSSECDSDTSS++EIGG+SNNIIKSTTNAERVDQLGAG  HVELSDTAGESKK PSRSTRRKKAKRRWLRERAQNEEQQQQ
Subjt:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ

Query:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE
        LFET+L+QGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEK+NHFPKETLHWNGITNKKKGQKWGKEK+PSWKRNNSN C+SEPLQLLSETE
Subjt:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE

Query:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
        QPKTPVPVVGSINFDE RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYP+PVKKEIDEDSELQ DTTPYGEDGSLKI
Subjt:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI

Query:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
        DFASLVDLR+IRQGNLDSSRTAVNQEITSKQIAESSKHVHNN DANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQE+SSGRKSWSYRALRGSALG
Subjt:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG

Query:  PTMALLRSQKEL
        PTMALLRSQKEL
Subjt:  PTMALLRSQKEL

A0A1S3BF70 Coilin

0.0e+00

94.12

Show/hide

Query:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
        MMEAVRLRVSFKDKDLLTDSLTGLSRSWI LKPHLRTISDLSSYILSVF LHDACPNGVILSMDGFVLPPFESVCILKD+DIVRVKKKKSKATILG G+R
Subjt:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
        LIETEEFRERKPVD GVK LADKEFENESNGYESQSEEDE NATL VKAVPVGKKVSKKRKASKII  SKRKKNKSSPTEEFPTI+ADV+H+DEKHEE+N
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN

Query:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ
        HLKS+LPQKVLVSKKDSSSSSSECDSDTSS++EIGG+SNNIIKSTTNAERVDQLGAG  HVELSDTAGESKK PSRSTRRKKAKRRWLRERAQNEE  QQ
Subjt:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ

Query:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE
        LFET+L+QGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEK+NHFPKETLHWNGITNKKKGQKWGKEK+PSWKRNNSN C+SEPLQLLSETE
Subjt:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE

Query:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
        QPKTPVPVVGSINFDE RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYP+PVKKEIDEDSELQ DTTPYGEDGSLKI
Subjt:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI

Query:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
        DFASLVDLR+IRQGNLDSSRTAVNQEITSKQIAESSKHVHNN DANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQE+SSGRKSWSYRALRGSALG
Subjt:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG

Query:  PTMALLRSQKEL
        PTMALLRSQKEL
Subjt:  PTMALLRSQKEL

A0A5A7ST29 Coilin

0.0e+00

94.29

Show/hide

Query:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
        MMEAVRLRVSFKDKDLLTDSLTGLSRSWI LKPHLRTISDLSSYILSVF LHDACPNGVILSMDGFVLPPFESVCILKD+DIVRVKKKKSKATILG G+R
Subjt:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
        LIETEEFRERKPVD GVK LADKEFENESNGYESQSEEDE NATL VKAVPVGKKVSKKRKASKII  SKRKKNKSSPTEEFPTI+ADV+H+DEKHEE+N
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN

Query:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAER-VDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQ
        HLKS+LPQKVLVSKKDSSSSSSECDSDTSS++EIGG+SNNIIKSTTNAER VDQLGAG  HVELSDTAGESKK PSRSTRRKKAKRRWLRERAQNEEQQQ
Subjt:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAER-VDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQ

Query:  QLFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSET
        QLFET+L+QGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEK+NHFPKETLHWNGITNKKKGQKWGKEK+PSWKRNNSN C+SEPLQLLSET
Subjt:  QLFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSET

Query:  EQPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLK
        EQPKTPVPVVGSINFDE RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYP+PVKKEIDEDSELQ DTTPYGEDGSLK
Subjt:  EQPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLK

Query:  IDFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSAL
        IDFASLVDLR+IRQGNLDSSRTAVNQEITSKQIAESSKHVHNN DANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQE+SSGRKSWSYRALRGSAL
Subjt:  IDFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSAL

Query:  GPTMALLRSQKEL
        GPTMALLRSQKEL
Subjt:  GPTMALLRSQKEL

A0A5D3CZQ0 Coilin

1.7e-303

90.52

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Query:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR
        MMEAVRLRVSFKDKDLLTDSLTGLSRSWI LKPHLRTISDLSSYILSVF LHDACPNGVILSMDGFVLPPFESVCILKD+DIVRVKKKKSKATILG G+R
Subjt:  MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN
        LIETEEFRERKPVD GVK LADKEFENESNGYESQSEEDE NATL VKAVPVGKKVSKKRKASKII  SKRKKNKSSPTEEFPTI+ADV+H+DEKHEE+N
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKN

Query:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ
        HLKS+LPQKVLVSKKDSSSSSSECDSDTSS++EIGG+SNNIIKSTTNAERVDQLGAG  HVELSDTAGESKK PSRSTRRKKAKRRWLRERAQNEEQQQQ
Subjt:  HLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQ

Query:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE
        LFET+L+QGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEK+NHFPKETLHWNGITNKKKGQKWGKEK+PSWKRNNSN C+SEPLQLLSETE
Subjt:  LFETSLEQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETE

Query:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI
        QPKTPVPVVGSINFDE RPYTGLPQ                        AGKVSWYDTESNRIMLIPVPEYP+PVKKEIDEDSELQ DTTPYGEDGSLKI
Subjt:  QPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKI

Query:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG
        DFASLVDLR+IRQGNLDSSRTAVNQEITSKQIAESSKHVHNN DANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQE+SSGRKSWSYRALRGSALG
Subjt:  DFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALG

Query:  PTMALLRSQKEL
        PTMALLRSQKEL
Subjt:  PTMALLRSQKEL

SwissProt top hits

e value

%identity

Alignment

Q8RWK8 Coilin

1.3e-106

42.57

Show/hide

Query:  EAVRLRVSFKDKDLLT--DSLTGLSRSWIVL--KPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKK-SKATILG-
        E VR+R+ F+D+ +L+      GL+RSW+VL  K H RTIS+ S +I   F L +ACP+G+ LSM+GFVLPPFES C+LKDKDIV VKKKK S   I+G 
Subjt:  EAVRLRVSFKDKDLLT--DSLTGLSRSWIVL--KPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKK-SKATILG-

Query:  -GGNRLIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEK
             +    E  ER  +  G  LLA++EF+ E+ GYES+SEEDE     + + VP  KK SKKRK S   + +KRKK K   TEE P         DE+
Subjt:  -GGNRLIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEK

Query:  HEEKNHLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNE
          E   + S+     +V KK    S    D  +++N E   ++N+  K  T ++R  Q      H +L   + E+KK PSRS RRKKAKR+WLRE+ + E
Subjt:  HEEKNHLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNE

Query:  EQQQQLFETSLEQGPSQNDDVDMD-------------------------DDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQ
          +++L +T L   PSQ   + +D                         D+ VPV V+PGHIRF+P+    TD+A  + +     E + WNG   KKKGQ
Subjt:  EQQQQLFETSLEQGPSQNDDVDMD-------------------------DDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQ

Query:  KWGKEKSPSWKR---NNSNDCSSEPLQLLSETEQPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIP
        KWG EKS   KR   + + D +++P +  +    P         I++++   YTG  ++GD+IAYRLIEL+S+WTPE+SSFR GK+S+YD +S  + L+P
Subjt:  KWGKEKSPSWKR---NNSNDCSSEPLQLLSETEQPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIP

Query:  VPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSA
        V E+P+  K E D+D  +QPDT+ Y EDGSL+I+F++L+D+R ++  + DS+  A +      Q A+  K +  N +     + NG+VS W+E+SEALSA
Subjt:  VPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSA

Query:  KKVELSK-NNGWNQEDSSGRKSWSYRALRGSALGPTMALLRSQKEL
        KK  LS+ NNGWN++ SS   SWSY+ALRGSA+GP M  LRSQKE+
Subjt:  KKVELSK-NNGWNQEDSSGRKSWSYRALRGSALGPTMALLRSQKEL

Arabidopsis top hits

e value

%identity

Alignment

AT1G13030.1 sphere organelles protein-related

9.0e-108

42.57

Show/hide

Query:  EAVRLRVSFKDKDLLT--DSLTGLSRSWIVL--KPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKK-SKATILG-
        E VR+R+ F+D+ +L+      GL+RSW+VL  K H RTIS+ S +I   F L +ACP+G+ LSM+GFVLPPFES C+LKDKDIV VKKKK S   I+G 
Subjt:  EAVRLRVSFKDKDLLT--DSLTGLSRSWIVL--KPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKK-SKATILG-

Query:  -GGNRLIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEK
             +    E  ER  +  G  LLA++EF+ E+ GYES+SEEDE     + + VP  KK SKKRK S   + +KRKK K   TEE P         DE+
Subjt:  -GGNRLIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEK

Query:  HEEKNHLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNE
          E   + S+     +V KK    S    D  +++N E   ++N+  K  T ++R  Q      H +L   + E+KK PSRS RRKKAKR+WLRE+ + E
Subjt:  HEEKNHLKSDLPQKVLVSKKDSSSSSSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNE

Query:  EQQQQLFETSLEQGPSQNDDVDMD-------------------------DDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQ
          +++L +T L   PSQ   + +D                         D+ VPV V+PGHIRF+P+    TD+A  + +     E + WNG   KKKGQ
Subjt:  EQQQQLFETSLEQGPSQNDDVDMD-------------------------DDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQ

Query:  KWGKEKSPSWKR---NNSNDCSSEPLQLLSETEQPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIP
        KWG EKS   KR   + + D +++P +  +    P         I++++   YTG  ++GD+IAYRLIEL+S+WTPE+SSFR GK+S+YD +S  + L+P
Subjt:  KWGKEKSPSWKR---NNSNDCSSEPLQLLSETEQPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIP

Query:  VPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSA
        V E+P+  K E D+D  +QPDT+ Y EDGSL+I+F++L+D+R ++  + DS+  A +      Q A+  K +  N +     + NG+VS W+E+SEALSA
Subjt:  VPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQGNGKVSAWDEISEALSA

Query:  KKVELSK-NNGWNQEDSSGRKSWSYRALRGSALGPTMALLRSQKEL
        KK  LS+ NNGWN++ SS   SWSY+ALRGSA+GP M  LRSQKE+
Subjt:  KKVELSK-NNGWNQEDSSGRKSWSYRALRGSALGPTMALLRSQKEL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGGAGGCTGTGAGACTGCGAGTTTCGTTCAAAGACAAGGACCTACTCACCGATTCCCTCACCGGGTTGAGCCGGAGCTGGATTGTCCTAAAACCCCATCTCCGAAC
TATTTCCGACTTATCCTCCTACATCCTCTCCGTTTTCTGTCTTCACGATGCTTGTCCCAACGGTGTCATCCTTTCTATGGATGGCTTTGTGTTACCTCCATTTGAGTCAG
TTTGCATCTTGAAGGATAAGGACATTGTCAGAGTGAAGAAGAAGAAAAGTAAGGCAACTATTCTGGGTGGCGGTAACAGATTGATCGAAACCGAGGAGTTCAGGGAGAGG
AAACCTGTTGACAAAGGAGTGAAACTTCTCGCTGATAAGGAGTTTGAAAATGAATCTAATGGGTATGAGAGTCAATCAGAGGAAGATGAAGCTAATGCTACTTTGCAGGT
GAAAGCTGTGCCAGTAGGAAAAAAAGTGTCCAAAAAAAGGAAAGCTTCGAAGATAATTCGCAAGTCGAAGAGGAAGAAAAATAAATCTTCCCCTACTGAAGAATTTCCAA
CTATCGTAGCAGATGTTCAGCACAGTGATGAAAAACATGAAGAAAAAAACCATCTGAAGTCTGACCTGCCACAAAAGGTCCTAGTAAGCAAAAAGGATTCATCCAGCAGT
TCTAGTGAATGTGATTCCGATACATCCAGCAACGTTGAAATTGGTGGAAGAAGCAACAATATTATTAAGTCAACTACCAATGCAGAGAGGGTTGATCAGCTTGGAGCTGG
CTGGAGACATGTTGAGTTGTCTGACACAGCTGGTGAAAGTAAAAAGGTTCCTAGTAGAAGTACTCGCCGTAAGAAGGCAAAAAGGCGTTGGTTGAGGGAAAGAGCTCAAA
ATGAAGAGCAACAGCAACAGTTATTTGAAACAAGTTTAGAACAAGGGCCAAGTCAAAATGATGATGTTGATATGGATGATGACACTGTTCCTGTGGTAGTTAAGCCAGGT
CACATTCGATTTGAGCCAGTTGGAAAAGTTGTGACGGATCAGGCTGGGCAGGAAAAGCAAAACCATTTCCCTAAGGAAACATTGCATTGGAATGGCATCACCAACAAGAA
GAAGGGCCAAAAATGGGGCAAAGAGAAAAGTCCATCTTGGAAGAGGAACAATTCTAACGATTGTAGCAGCGAACCTCTTCAATTACTTTCTGAAACTGAGCAACCTAAAA
CTCCGGTTCCTGTAGTTGGTTCAATAAATTTTGATGAACATCGACCATACACTGGCTTGCCTCAGGAAGGTGATTTAATTGCATATCGTTTGATTGAGTTATCATCAACC
TGGACACCTGAGATTTCCTCCTTTCGAGCTGGAAAAGTATCATGGTACGATACAGAATCCAATCGGATTATGCTCATACCAGTTCCAGAATATCCACTACCTGTGAAGAA
GGAGATAGACGAGGATTCTGAATTACAACCGGATACAACCCCATATGGGGAAGATGGCTCTTTAAAGATAGATTTTGCCTCTCTCGTTGATCTTCGGATTATCAGGCAAG
GAAACTTGGATTCTTCGAGAACTGCAGTTAACCAGGAAATCACTTCTAAACAAATTGCAGAAAGTTCCAAGCATGTCCATAACAATGTAGATGCCAACGACACTAGACAA
GGTAATGGAAAAGTAAGCGCGTGGGATGAAATCAGCGAGGCTCTGAGTGCAAAGAAAGTGGAACTTTCTAAGAACAATGGTTGGAATCAAGAAGACAGTTCAGGAAGGAA
GTCTTGGTCCTATAGAGCACTCAGAGGCAGCGCCCTTGGTCCAACAATGGCTCTCTTAAGATCTCAAAAAGAACTCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MMEAVRLRVSFKDKDLLTDSLTGLSRSWIVLKPHLRTISDLSSYILSVFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATILGGGNRLIETEEFRER
KPVDKGVKLLADKEFENESNGYESQSEEDEANATLQVKAVPVGKKVSKKRKASKIIRKSKRKKNKSSPTEEFPTIVADVQHSDEKHEEKNHLKSDLPQKVLVSKKDSSSS
SSECDSDTSSNVEIGGRSNNIIKSTTNAERVDQLGAGWRHVELSDTAGESKKVPSRSTRRKKAKRRWLRERAQNEEQQQQLFETSLEQGPSQNDDVDMDDDTVPVVVKPG
HIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETEQPKTPVPVVGSINFDEHRPYTGLPQEGDLIAYRLIELSST
WTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVHNNVDANDTRQ
GNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALGPTMALLRSQKEL

CSPI05G22140 (gene) of Cucumber (PI 183967) v1 genome